Candidatus Baumannia cicadellinicola BGSS: IM45_799
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Entry
IM45_799 CDS
T03277
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bcib
Candidatus Baumannia cicadellinicola BGSS
Pathway
bcib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IM45_799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcib03021
]
IM45_799
03400 DNA repair and recombination proteins [BR:
bcib03400
]
IM45_799
Enzymes [BR:
bcib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IM45_799
Transcription machinery [BR:
bcib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IM45_799
DNA repair and recombination proteins [BR:
bcib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IM45_799
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AIN47273
UniProt:
A0A088NAX5
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All DBs
Position
409895..410884
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSLTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVREDILEILLNLKGLAVKVQSKDDVILTLSKSGIGPVTAASIIHDND
VEIIKPRHILCHLTDEHASINMRIKVQRGRGYVPASARIHSSQDEHPIGRLLVDACYSPV
ENISYNVEAARVEQRTDLDKLIIEIETNGTIDPEEAIRRAATILAEQLEAFVDLRDISQP
EIKEDKPQFDPVLLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLALGMRLDNWPPTGFIDE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaaaccgcgtttggttgatatcgagcaagtgagt
ttgacacacgccaaggtgactctagaaccgctagagcgtggattcggtcatactctcggt
aacgctctacgtcggattttactttcatcgatgccagggtgtgcagttaccgaagttgag
attgatggtgttttacatgaatatagtacaaaagaaggtgtacgagaagatattctcgaa
atattactgaatctaaaaggacttgcagtaaaagttcaaagtaaagatgatgttatcttg
actttgagtaaatctggtattggtccagtgacagccgctagcattattcatgataatgat
gttgagattatcaaaccacggcatatattatgccacttaactgatgaacacgcatctatc
aatatgcgcattaaagttcaacgtggacgtggttatgttccagcatctgctcgaattcat
tcatcacaagatgagcatccaattggtcgtttgctcgtagatgcatgctatagccctgta
gaaaatatttcttataatgtagaagctgcacgagttgagcaacgtactgacttagataaa
ctcattatagaaattgagactaatggaactattgatcctgaagaagctatccgtcgtgct
gcgaccattctggcagaacaactagaagcttttgttgacttacgtgatattagtcagcca
gaaatcaaagaagataaaccacaatttgatcccgttcttttacgaccagttgatgattta
gaattaactgtgcgctctgctaattgccttaaagccgaagctattcactatattggtgat
ctagtacagcgcactgaagttgagttactcaaaacgcccaatcttggtaaaaaatctctt
actgaaattaaggatgtgttagcttctcgtggtttagctttaggtatgcgtcttgataac
tggcctcctacaggttttattgatgaataa
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