KEGG   Candidatus Baumannia cicadellinicola BGSS: IM45_799
Entry
IM45_799          CDS       T03277                                 
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bcib  Candidatus Baumannia cicadellinicola BGSS
Pathway
bcib03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bcib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    IM45_799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcib03021]
    IM45_799
   03400 DNA repair and recombination proteins [BR:bcib03400]
    IM45_799
Enzymes [BR:bcib01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     IM45_799
Transcription machinery [BR:bcib03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     IM45_799
DNA repair and recombination proteins [BR:bcib03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      IM45_799
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AIN47273
UniProt: A0A088NAX5
LinkDB
Position
409895..410884
AA seq 329 aa
MQGSVTEFLKPRLVDIEQVSLTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVREDILEILLNLKGLAVKVQSKDDVILTLSKSGIGPVTAASIIHDND
VEIIKPRHILCHLTDEHASINMRIKVQRGRGYVPASARIHSSQDEHPIGRLLVDACYSPV
ENISYNVEAARVEQRTDLDKLIIEIETNGTIDPEEAIRRAATILAEQLEAFVDLRDISQP
EIKEDKPQFDPVLLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLALGMRLDNWPPTGFIDE
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgttacagaatttttaaaaccgcgtttggttgatatcgagcaagtgagt
ttgacacacgccaaggtgactctagaaccgctagagcgtggattcggtcatactctcggt
aacgctctacgtcggattttactttcatcgatgccagggtgtgcagttaccgaagttgag
attgatggtgttttacatgaatatagtacaaaagaaggtgtacgagaagatattctcgaa
atattactgaatctaaaaggacttgcagtaaaagttcaaagtaaagatgatgttatcttg
actttgagtaaatctggtattggtccagtgacagccgctagcattattcatgataatgat
gttgagattatcaaaccacggcatatattatgccacttaactgatgaacacgcatctatc
aatatgcgcattaaagttcaacgtggacgtggttatgttccagcatctgctcgaattcat
tcatcacaagatgagcatccaattggtcgtttgctcgtagatgcatgctatagccctgta
gaaaatatttcttataatgtagaagctgcacgagttgagcaacgtactgacttagataaa
ctcattatagaaattgagactaatggaactattgatcctgaagaagctatccgtcgtgct
gcgaccattctggcagaacaactagaagcttttgttgacttacgtgatattagtcagcca
gaaatcaaagaagataaaccacaatttgatcccgttcttttacgaccagttgatgattta
gaattaactgtgcgctctgctaattgccttaaagccgaagctattcactatattggtgat
ctagtacagcgcactgaagttgagttactcaaaacgcccaatcttggtaaaaaatctctt
actgaaattaaggatgtgttagcttctcgtggtttagctttaggtatgcgtcttgataac
tggcctcctacaggttttattgatgaataa

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