Niallia circulans: C2I06_20970
Help
Entry
C2I06_20970 CDS
T06357
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
bcir
Niallia circulans
Pathway
bcir03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2I06_20970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcir03019
]
C2I06_20970
03009 Ribosome biogenesis [BR:
bcir03009
]
C2I06_20970
Messenger RNA biogenesis [BR:
bcir03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2I06_20970
Ribosome biogenesis [BR:
bcir03009
]
Prokaryotic type
rRNA helicases
C2I06_20970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AYV69130
UniProt:
A0A268FAX8
LinkDB
All DBs
Position
4371737..4373203
Genome browser
AA seq
488 aa
AA seq
DB search
MVKFQDLGISPATMKALKRMGFEEATPIQAETIPLSLQNKDLIGQAQTGTGKTAAFGVPL
VDKIDVANEVIQGIIIAPTRELAIQVSEELYKIGYGKRTRVLSIFGGQDINRQIRALKKN
PHIIVGTPGRILDHINRKTLRLDNVQTVILDEADEMLNMGFIDDIEAILSKIPTERQTLL
FSATMPGPIRKMAERFMKDPEVVKVKAKEMTVPLIEQYYIETQEKTKFDILTRLLDIQSP
ELAIIFGRTKRRVDELSEALNLRGYTAEGIHGDLSQAKRMSVLRKFKEGTIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKEGVAITFITYRERSYLQVVEKTTK
RKMEKMIPPTVDQAIEGQQKAVMEKISQIIEENNLESYRNTADELLEQKDASTVVAAVLK
MLTKEPDTTPVKLTEEKPLPMKRDRRPYDKNNDRGGRKNYNPRQRQGYGGNKRQGQSGNS
YNKSKSYR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaagtttcaagatttaggtattagtcctgctacaatgaaagcattaaaaagaatg
gggtttgaggaagcgacgcctattcaggcagaaacgattccattgagccttcaaaataaa
gacttaattggtcaagcacaaacaggaacagggaaaacagctgcttttggagtgccttta
gttgataaaattgatgtagcgaatgaagtaattcaaggaattattattgctccgacaaga
gagctagctattcaggtttcagaagaattatacaaaattggatatggaaagcgcacaaga
gtattatctatttttggcggacaggatataaatcgccaaatccgtgcattgaagaaaaac
ccgcatattattgttgggacacctggacgtatattagatcatattaatcgtaaaacactt
cgattagataatgttcaaacagttattttagacgaagcagatgaaatgctaaatatggga
ttcattgatgatattgaagcaatcctttcaaaaattccaacagaaagacaaacattatta
ttctctgctacaatgccaggaccgattagaaaaatggcagagcgctttatgaaagatcca
gaagtagttaaagtgaaagcaaaagaaatgactgtgccgttgattgaacagtattatatc
gaaacacaagagaaaacgaaatttgatatattaacaagattattggatattcaatctcca
gaactagctattatattcggtcgcacgaaacgtcgtgttgatgagctgtctgaagcatta
aatctacgtggctatacagcagaagggattcatggagatttaagccaagcgaaacgtatg
tctgttcttcgtaagtttaaagaaggaacgattgatgtactagtggcaacagatgtagct
gcacgtggacttgatatttccggtgtaacacatgtttataactttgatatccctcaagat
ccagaaagctatgtacaccgtatcggacgtactggccgtgcaggaaaagaaggggtagct
attacgtttattacgtatcgtgaaagatcttatctgcaagttgtggaaaaaacaacgaag
cgaaaaatggaaaagatgattcctccaacagtcgaccaagcaatagaaggacagcaaaaa
gctgttatggaaaaaatatcacaaattattgaggaaaataacttagaatcttatcgaaat
actgcggatgaattattggaacaaaaagatgcttctaccgttgtagctgcagttctaaaa
atgcttacaaaagaaccagatacaactcctgttaaattaacagaagaaaagccattgcca
atgaaacgtgaccgcagaccgtatgataaaaataatgaccgtggtggacgtaaaaactac
aacccacgtcaacgtcaaggctatggcggcaacaaacgtcaaggtcaatcaggcaatagc
tacaataaatcaaagtcttaccgttaa
DBGET
integrated database retrieval system
