Shouchella clausii: ABC0063
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Entry
ABC0063 CDS
T00228
Symbol
pelB
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bcl
Shouchella clausii
Pathway
bcl00040
Pentose and glucuronate interconversions
bcl01100
Metabolic pathways
bcl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ABC0063 (pelB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABC0063 (pelB)
Enzymes [BR:
bcl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ABC0063 (pelB)
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BAD62606
UniProt:
Q5WLW9
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All DBs
Position
80070..81053
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AA seq
327 aa
AA seq
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MVVFLLAFGAFSMPAYGQEGAEAANVNFSMQGFATLNGGTTGGAGGDVVTVSTGDQLIAA
LKNKKANTPLTIYINGTITPANTSASKIDIKDVNDVSLLGVGTNGELNGIGIKVWRANNV
IIRNLKIHHVNTGDKDAISIEGPSKNIWVDHNELYNSLDVHKDYYDGLFDVKRDADYITF
SWNYVHDSWKSMLMGSSDSDSYGRKITFHNNYFENLNSRVPSVRFGEAHIFSNYYADIRE
AGINSRMGAQVRIEENDFERANNPIVSRDSKEIGYWHLVNNRYVSSTGEQPTVSTTTYNP
PYSYQATPVNQVKDVVRANAGVGVISP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgtttttgctggcgtttggtgctttttccatgccagcgtatgggcaagaaggg
gcggaagcagccaatgtgaatttctcaatgcaagggtttgccactcttaatggagggact
acaggaggcgctggaggagatgttgtcacggtttccaccggtgaccaattgatagccgca
ctaaaaaataaaaaggcgaacacgcctttaaccatttatataaacggaacaatcacgcct
gcaaacacatctgcaagcaagattgacattaaagatgtcaatgatgtgtctttgttaggg
gtaggaacaaatggggaacttaacggaattggcattaaagtgtggcgggccaataacgtg
atcatccgcaatttgaaaattcatcatgtgaatacaggcgataaagatgccattagcatt
gaaggcccatccaaaaacatttgggtcgaccataacgaactctataatagccttgatgtg
cataaggattattacgatggattgtttgatgtgaaacgggatgctgattacatcactttc
tcatggaactatgtacacgacagctggaagtcgatgctgatgggttcgtctgacagcgat
tcatatggacgaaaaattacattccacaataattactttgaaaacttgaattcccgtgtg
ccttctgttcgctttggcgaagcccatattttcagcaattactacgcagatattagagag
gcagggatcaattctcgcatgggcgctcaagtacgaatcgaggagaacgattttgaaaga
gcaaacaatccaattgtgagccgagacagcaaggaaatcgggtattggcatctagtcaat
aaccgctatgtttcttcgactggcgagcagccaactgtctcgacaacgacttataatcca
ccatacagctatcaagcaacgcctgtaaaccaagtgaaggatgtggtgcgggcgaacgcc
ggagttggggttatttctccttaa
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