Burkholderia orbicola: Bcenmc03_1831
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Entry
Bcenmc03_1831 CDS
T00669
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bcm
Burkholderia orbicola
Pathway
bcm02024
Quorum sensing
bcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcenmc03_1831
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bcenmc03_1831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcm03019
]
Bcenmc03_1831
03036 Chromosome and associated proteins [BR:
bcm03036
]
Bcenmc03_1831
Messenger RNA biogenesis [BR:
bcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Bcenmc03_1831
Chromosome and associated proteins [BR:
bcm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Bcenmc03_1831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ACA90992
UniProt:
B1JT87
LinkDB
All DBs
Position
1:complement(2036233..2036472)
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AA seq
79 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDAEASS
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgcaaagagcac
gttcccgtttcgatctacctcgtcaacggcatcaagcttcaagggaacattgaatcgttc
gaccagtacgtcgtgttgctccgtaatacggtgacccagatggtttacaagcacgccatc
tcgacggtcgtgccggcgcgcccggtgaatttccacccggacgcggaagcctcgtcctaa
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