KEGG   Burkholderia orbicola: Bcenmc03_1831
Entry
Bcenmc03_1831     CDS       T00669                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bcm  Burkholderia orbicola
Pathway
bcm02024  Quorum sensing
bcm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bcenmc03_1831
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Bcenmc03_1831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcm03019]
    Bcenmc03_1831
   03036 Chromosome and associated proteins [BR:bcm03036]
    Bcenmc03_1831
Messenger RNA biogenesis [BR:bcm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Bcenmc03_1831
Chromosome and associated proteins [BR:bcm03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Bcenmc03_1831
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ACA90992
UniProt: B1JT87
LinkDB
Position
1:complement(2036233..2036472)
AA seq 79 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDAEASS
NT seq 240 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgcaaagagcac
gttcccgtttcgatctacctcgtcaacggcatcaagcttcaagggaacattgaatcgttc
gaccagtacgtcgtgttgctccgtaatacggtgacccagatggtttacaagcacgccatc
tcgacggtcgtgccggcgcgcccggtgaatttccacccggacgcggaagcctcgtcctaa

DBGET integrated database retrieval system