Sutcliffiella cohnii: BC6307_18950
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Entry
BC6307_18950 CDS
T06787
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bcoh
Sutcliffiella cohnii
Pathway
bcoh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC6307_18950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoh03019
]
BC6307_18950
03009 Ribosome biogenesis [BR:
bcoh03009
]
BC6307_18950
Enzymes [BR:
bcoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BC6307_18950
Messenger RNA biogenesis [BR:
bcoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BC6307_18950
Ribosome biogenesis [BR:
bcoh03009
]
Prokaryotic type
rRNA helicases
BC6307_18950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CPDase
SnoaL_3
Motif
Other DBs
NCBI-ProteinID:
AST93190
UniProt:
A0A223KUQ6
LinkDB
All DBs
Position
complement(3753813..3755087)
Genome browser
AA seq
424 aa
AA seq
DB search
MDNFTTLGISDSLIEKITAQNIDKPTPIQEKTIPVLLEDQDVIAQAKTGTGKTLAFILPM
LQKIDVEKDHVQGLIVTPTRELAIQITAELEKLVPKQESDIHVLPVYGGQDVDKQIKQLN
RHVHIVVATPGRLLDHVRRETIDLSKVSMLVLDEADQMLHIGFLPEVEAIIEETPSTRQT
ALFSATISKEVRKLAKRYLKNANHIQVQNKEKTVEQIQQLVVETTDRQKQQALHKTIKEY
QPFLAIVFCRTKRRVSKLQYELKSKGYNTEELHGDLSQAKRERVMKLFREAKIHLLIATD
VAARGLDVEGVTHVFNYDIPEDVESYIHRIGRTGRAGEDGMAITFVAPKDRQQWDEIEKG
LQRTIERKVVEVADKSPEANQQKKKAPTESKKDRREQNIANNKERKQRTTFTSRNEKRKP
SRKR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttggacaattttacaacgttaggaatatcagattcattaatagaaaaaatcacagcacaa
aatattgataaaccaacaccgatacaagaaaaaacaattcctgttttattagaagatcaa
gacgtaattgcacaagcaaagacaggaacaggaaaaacgttagcatttattttaccgatg
cttcaaaaaatagatgtggaaaaagatcacgtacaaggtttaatcgtaacgcctacaaga
gagctagccattcaaattacagcagaattagaaaaattagttcctaaacaggaaagtgat
atacatgtattaccggtttacggtggacaagatgtggataaacaaattaaacaattaaat
cgtcatgtccatattgtcgtggcaactccaggtcgattactagatcatgtacgaagagaa
acgattgacttatcgaaagtatcaatgcttgtcttagatgaagcagaccaaatgttacat
atcggcttccttccagaagtagaagcaattatagaagaaacaccatccacaagacaaacg
gcgttattttctgcaactatttcaaaagaagtacgtaaactagcgaagcgatatttaaaa
aatgcgaatcatatacaggtgcaaaataaagaaaaaacggtggagcaaatacaacagcta
gtcgtagagacgacagaccgccaaaagcaacaagcattacataaaacgattaaagaatac
cagccgtttttagctatcgtcttttgccgtacgaaacgtagagtcagtaagttgcaatat
gagttgaaatcaaaaggatataatacggaagaattacacggtgacctttcgcaagcaaag
cgagaaagagtgatgaaactattccgagaagcaaaaattcatttattaattgctaccgat
gtggcagcgagagggctcgatgtagaaggagttactcacgtatttaactacgatattccg
gaagatgtagaaagctatattcatcgaattggtcgaactggtcgagctggggaagacgga
atggccatcactttcgttgccccaaaggaccgtcaacaatgggacgaaatcgaaaaaggg
ttacaacgcacaatcgagcgtaaagtagtagaagtagccgacaaaagcccagaagccaac
caacaaaagaaaaaagcaccaaccgaatcaaaaaaagacagacgcgaacaaaacatcgcc
aataacaaagaacgaaaacaaagaacaaccttcacaagccgaaacgaaaaaagaaaacca
tcacggaaacggtaa
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