Baudoinia panamericana: BAUCODRAFT_159617
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Entry
BAUCODRAFT_159617 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bcom
Baudoinia panamericana
Pathway
bcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAUCODRAFT_159617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_159617
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BAUCODRAFT_159617
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BAUCODRAFT_159617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_HEAT
CNOT1_TTP_bind
ARM_Cnot1
Motif
Other DBs
NCBI-GeneID:
19109371
NCBI-ProteinID:
XP_007680178
JGI:
Bauco1_159617
UniProt:
M2M920
LinkDB
All DBs
Position
Unknown
AA seq
2310 aa
AA seq
DB search
MNRPLSSSPHKPPNTESAGPTSAGAGGTRSHHSPWPALQSSSHRTGLPPIAIGPTWPNNP
TPSISRSPFSPTHSTFTHNQAAANRYSNSWQSFATSAQPLQSPSASGQYTTSSAYPGQRS
RAATGASSPRIASPLTGLSSPFQAISGGAFGGGGGAARLARHSPSLSSSTVGSPTSSGGG
QLNSLLLTQLNILLSTVKDSNFDLQADKIRKLLDENGMELFETYFRRLLSNSWSLVFPHH
PRPASSQANAETYRLLEQEVQKLRTDPRQAERIASAFGSHDLDIDLTAFADHFQLDQVTR
AALLLACRLAANGDLRSRADQILTSNTQPFLSTLANPPSGPTGAIHDDVSPQVLALIIER
LDQDPPHEWSERQKEDLSYAVKVHYQKLNSRLPPAVEAAMYLNELLQLPDSRLARVVQRA
GPRATASLDACRDMLAVVETRDISYPQIANALLFLVISQNGEAYDAGVFVEGLRQHKAGL
KIDWTDVVQGFDKEHLRVTKKQFLGLYNALLPLAREYANFDIQHLWGGQWTFPATQLSFV
TAFLSTTSEELDVAQIPDFRQCFTLADYADAPEGIKAYAAEAVKYPLVSRDATEALFVMI
FRSQEAYNEAQMLSIPETIINPNMTIFLCAASAVPKPWGALQDQALKQLFYPFLMKQHPN
YDFVMHSLWMHDKTWVAQRLVEFYQTDSTLLGLVHEHAVEHGWLDLLLTIHSNFALDLAA
LAHSKGQYDIVEWAQPLIHQLGHGPFAKALFDFMRPKLDDEIITQKERVPPTTVPLSLKT
VYAMLMLLAELVREEELGPFYRQCLQTYPRLFNYGENDRRDSILEANCANGHALPEDADE
KMQERYKKMYGGEATPDDIKNELKVLKESDDPADQDLFAVMLQGLFDEYNCFGEYPLEAL
ATTAVLFGGLLAYHIPSSVAEHAAIFMILEAVSEYGPEDSMYKFGLQAMVHMSSRLKEWP
HVAERITQIPSLRGTQVVPVAEAVLKELQQETSGLNGDTVNGLTNGALDEEFPADSPTPP
FTSIRPDPPLQAEMYEEPNEDVSDKVMFALNNVSMRNLDEKFKDLETLEETHHQWFAKYL
VEELAKSQPNFQSLYLQLLEKFDRKMLWAEVLRETYVSCARMLNAPSTMEKMPERQSLKN
LAGWLGALTLARNQPVLHRNLSFKDLLIEGHDTQRLLVAIPFTCKALWHARVSKVFRPPN
PWLMELLGLMSELYNTVDLKLNLKFEIEVLCKDLDQDIKKIEPLQIIRARPLMPENNLLQ
PYVGDGGPDGFGDMHLMQLSKRPPNERFSPEAVIQALPDLGGMLQIPTAAGNITQPQLRG
IFVNAAQRAIYEIIAPVVERSVTIAAISTAELIQKDFATEADVEKLRNSAHTVVKALSGS
LALVTCKEPLRMSIMNNIRIFAQQNVHDPLPEGQIIMFVNDNIDTVCGLVEHAAEEHSLA
EIDAQLAQAIEERERHNEQRPNELFNNPPVSRWAQLIPEPFRQDPQGVNANGLNRQQLGL
YEDFGRQARITPTTHANSVSQDARGQLPDMLADTYLPNLPTPAEAPALPRPTPQLQRLQM
QSAQGQHQVNGYSDGPDSGRRILSLLHELQQAAQEAQEDSINEVGEATAIRRIFEQLIAL
LDSSVQRDELTIAAGEHCLSVIYHTAQKRLEVEVFVRLMAQLCRMSTHAARVLMMYLANQ
EDDKAFNAIAVVALANEGMVDLQHVDIRTAKALKQKRPAVVGFLRQLLEETLISENAIAM
RTDFVMTYEGISQWLAEDPDNESLRDIMSRLQLESTQQNGVPSSPQDDERDHIEYVFEEW
VRMQQRKDIPEHRHVAFLKQLNKFHIVDNPEKSVVFYRACLEMAGSAFERVTNAPYATPD
AAYVHIDAFARLVAYSVLYHSPINGEAPHDKARVLGGVIALIVMVMADHHNKQRERWNSR
IYFRLFSSLLCELNDKRHSMSPAEQQAMSQETFGKVLLLLQPRYFPNFTYPWLALISHRL
VITSFLSGAGRSNGGWAHFAGILGTLFESLGQLFSIPEASTVIQDYYKGVIKFLLTLHHD
FPEFLVEHHFELNSSIPHGLAQLHNIINSAAPRPIEQPDPLTPGLKINRLETIRSPPIVH
GNQDVLLAELGIKDAIDRVYESGDISNDDFSKILDALALGDGPADARRANAFVIYLGIQA
TTSSSVFSSAAPPARLLERLLRESRPAARYELISAMINQVRYVNAHTHYFSTALQHMFTV
AAEDLQEQIMRVMMERLIVPRPHPWGIIVMILELVKNSTTDLWELPWLRNASQVQSMLMN
LAQSAPSQGPGMLPGRLPRSPLGPPTMLQH
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccccctctcctcctcacctcacaaaccccccaataccgagagcgcaggcccc
acgtccgccggagcaggaggcacgagatcacatcactcgccgtggcctgccctacagtct
agcagtcatcgtactggtctaccgcccatcgctataggaccgacgtggccaaataatccc
acaccgagcatatcgcggagtccattctctcccacccactccaccttcacccacaatcaa
gcggccgccaaccggtatagcaacagctggcagtcattcgctacgagtgcacagccactt
cagtcaccatctgcgtctggtcaatatactacaagctcggcatatcctgggcagcgctca
cgtgctgctactggcgcgtctagccctcgaatagcatccccactcactggtctgtcgtcg
ccgttccaagcaatcagcggcggggcatttggtggcggtggaggcgctgctcgactagca
cggcactcaccgtcactctcaagctccacggttggctcgcctacctccagcggaggcggg
cagttgaatagcttgctcctcactcagctcaacatcttgttgagtactgtcaaggactcc
aacttcgatttacaggcggacaagatacgaaaacttctcgatgaaaacggcatggagctg
ttcgagacgtacttcagacggcttttaagcaatagctggtcgcttgtcttcccacaccat
ccaaggccagcgagttcgcaagcgaatgcggagacatatcgcttactagagcaagaagtt
cagaagttgagaacggaccctcggcaggcggagagaatagcctcagccttcggatcgcat
gacctcgacattgacctcactgcgtttgccgaccatttccaactagatcaagtcacgcgg
gctgcactgctcttagcgtgtagattagctgccaatggtgacttgcgctcaagagccgac
caaatattgacgagcaatacacagcctttcctctccacccttgcaaacccaccatctggc
ccaaccggcgcgattcacgacgatgtctcaccgcaggtcttagcgctgattatcgaacgt
cttgatcaggatcctccccacgagtggagcgagcggcaaaaggaggacttgagctacgca
gtaaaggttcactatcagaagctgaacagcagactgccacctgcagtggaagcagccatg
tatctgaatgagctactccagctcccagacagtaggcttgccagagtagtgcagcgagca
ggcccgcgtgccaccgcaagtctggacgcttgcagagatatgctcgccgtggtcgagact
agggacatctcctacccgcaaatagcgaatgcgctgctgtttctggtcattagccagaac
ggagaagcttacgatgcaggcgtattcgtggaaggcctacggcagcataaggctggcctg
aagattgactggacagacgtcgtacaaggcttcgacaaggagcacttgcgagtaacgaag
aagcagttcctcggcttgtacaatgcgctgctccctctggcgcgagagtacgcgaacttc
gacatccagcacctttggggcggtcaatggaccttcccagccacccaactcagcttcgtc
actgcattcctgtccacgacctcggaagagcttgatgttgctcagataccagactttaga
caatgcttcactctggccgactacgcggatgcacccgagggcatcaaggcatatgcggca
gaagccgtcaagtatccgcttgtctcgcgcgacgccactgaagctctgttcgtcatgatc
ttccggtctcaggaagcctataacgaagcacagatgctcagcatcccggagacgatcatc
aacccgaacatgacaatcttcctttgcgccgcatcagccgtgccaaagccgtggggcgca
ttgcaggatcaagcgcttaagcagctcttttatcccttcctcatgaagcagcaccctaat
tacgactttgtgatgcattcactatggatgcacgacaagacgtgggtagcgcaacggctt
gttgaattttatcagacggacagcacgctactcggacttgttcatgagcatgcagtcgaa
catggctggctggacctgttgctcaccattcacagcaacttcgcccttgacttggctgcg
ttggcacatagtaaaggccagtacgatattgtggaatgggcgcagccgctcattcatcag
ctcggccatggtccgtttgcaaaagcgttattcgacttcatgcgaccgaagctggacgac
gagataatcactcagaaagagcgcgtgccgccgacgactgtgccgctgtcgctgaagact
gtgtacgctatgctgatgcttttggcagagctggtgagagaagaagagctcggccctttc
tatcggcagtgcttgcaaacttatccacgcctcttcaattacggcgagaacgaccgccga
gattccatcttggaagccaattgcgccaacggacacgctcttcctgaagatgccgatgag
aagatgcaagagcgctacaagaagatgtacggcggggaagccactccggacgacatcaag
aacgagctgaaggtgctcaaggagtcggatgatcctgccgaccaagaccttttcgccgtc
atgctgcaaggactatttgacgagtataactgctttggagagtatcctttggaggcactc
gcaacaactgcagttttattcggcggcctgttagcataccacattccttccagtgtcgcc
gaacatgccgctatttttatgattctagaggcagtctcggagtacggaccagaggattcc
atgtataagttcgggttgcaggcaatggtccacatgtcttcgagactcaaggagtggcca
cacgtggctgagcgcatcacccaaataccaagcttgcgaggtactcaggttgtacccgtt
gcggaagccgttctgaaggagctgcaacaggagacttccggcctcaatggagatactgtc
aatgggctcaccaacggggcgctagatgaggagtttccagctgactctcccacgccgccg
ttcacctccattcgtcctgacccgccgttgcaagcagagatgtacgaagagccgaacgaa
gacgtttcggacaaggtgatgtttgccctgaacaacgtttcgatgaggaatttggacgag
aagttcaaggacttggagactctggaggagactcaccatcagtggttcgcgaaatacttg
gtcgaagagctcgccaagtcgcagccaaacttccagagcctatacctgcagttgctggag
aagtttgaccggaagatgctctgggccgaagtgctgcgagagacatacgtcagctgcgcg
aggatgctcaatgcgccatcgactatggagaagatgcccgagcgacaaagcctgaagaat
ctggcaggctggctaggcgcactgacgctggcgcgcaatcagccggtcttgcacaggaac
ctttcgttcaaggatttgctgattgaagggcacgacacacagcgattactcgtcgctatc
ccattcacttgcaaagcactttggcacgctagggtgtcgaaggtcttccgaccgccaaac
ccatggcttatggagttgctaggtctgatgagcgagctttacaataccgttgacctaaag
ctcaatctcaagttcgagatcgaggtcttatgcaaagatctggaccaagacatcaaaaag
atcgaaccgctgcagatcatacgcgccaggccgctcatgccagaaaacaacttgcttcaa
ccgtacgtcggcgatggcgggccggatggttttggcgacatgcaccttatgcagctttcg
aagcggccgccgaacgagcgcttctcacccgaagcggtcatccaagcactgcccgatctt
ggcggtatgctccagatccctacagccgccggcaacatcacccagcctcagctccgtggc
atcttcgtgaacgctgcccagcgggcgatctatgagatcatcgcgcctgtggtagagcga
tccgttaccattgctgcgatctctacggctgagctgatccaaaaagacttcgctaccgag
gccgatgtcgagaagttgcgcaattcggcgcacactgtggtgaaggcgctgtctggcagt
ctcgctctggtcacctgcaaggagcctctccgcatgagtatcatgaacaacattcgtatc
ttcgcacaacagaacgtgcacgacccactcccggaaggccaaatcatcatgttcgtcaac
gacaatatcgacactgtgtgcgggcttgttgagcatgcggcagaggaacactctctggcg
gagattgatgcgcagcttgcgcaagcaatcgaagagcgcgagcggcacaacgaacaaaga
ccaaatgagctgttcaacaacccgcccgttagtcgctgggcgcagctgattccggagccg
ttcagacaggatccgcaaggtgtcaatgcgaacgggctcaaccgccaacagcttgggttg
tatgaagacttcgggcgtcaggcaaggatcacaccaacgacgcatgcgaacagtgtgtcg
caagatgcgagaggacagctgccggatatgttagctgacacttatctgcccaacctgcct
acacctgctgaagcgcctgcgctgccgagaccgacgccacagctgcaacgcttgcaaatg
cagtccgcgcagggccaacaccaggttaacggttacagtgacgggccagatagtggacgg
cggatattatctctgctccacgaactgcagcaagcggcacaggaggcgcaagaagactcc
atcaacgaagtcggcgaagctacggccatcaggcggatcttcgagcagctcatagctctg
ctcgactcctccgtgcagagggatgaacttacgattgcggcaggagagcactgtctctcg
gttatttaccatactgcgcaaaagcgtcttgaggtcgaagtgtttgttcgcttgatggca
cagctgtgccggatgtcgacgcatgcagcccgggttctgatgatgtacttggcaaaccag
gaggacgacaaggctttcaacgccatagctgtggtggctttggccaatgaaggtatggtc
gaccttcagcatgtcgacatccggaccgcgaaggcactcaagcagaagcggccggcagtt
gttggcttccttcgtcagctgctagaagagacattgatcagcgaaaatgcgattgcgatg
cgcaccgattttgtcatgacttacgaagggattagccaatggctcgcggaagatccggac
aacgagagcctccgagatatcatgtcgagactgcagctcgagtctacacaacagaacggt
gtgccgagctcaccgcaagatgacgagcgggatcacatcgaatacgtcttcgaggaatgg
gttcgcatgcagcagcgcaaagacatccccgagcacagacacgttgctttcctgaagcaa
ttgaacaagttccacatcgtggataacccggagaaatccgtcgtattctaccgcgcctgc
ttagaaatggcgggctctgctttcgagcgagtgacgaacgcgccgtatgcgacaccagat
gctgcatatgtacacatcgacgcgttcgccaggcttgttgcgtactccgtcctctatcac
agtccgatcaacggagaggcaccgcatgacaaagcacgtgtgttgggcggcgtcattgca
ttgattgtgatggtgatggcggaccatcacaacaagcagcgagagcggtggaattcaagg
atctatttccgacttttctcatcgctgctttgtgagctaaatgacaagagacactcgatg
agccccgcggaacagcaagctatgtcccaagaaactttcggcaaagtattgctgctcttg
cagccgcgatacttccccaacttcacgtacccgtggttagctcttatcagtcaccgcctt
gtcattacctcgttccttagcggagccggcaggtccaacggcgggtgggcgcactttgct
ggcatacttggcacgctgtttgagagcctcgggcagctcttcagcataccagaagcgtcc
acagtgatccaagactactacaagggcgtcattaagtttttgcttacgctgcaccacgac
ttcccggagttcttggttgagcaccacttcgagctgaacagtagcatacctcacggtctg
gcgcagctgcacaatataatcaacagtgctgcaccgaggccaatcgagcagcctgacccg
ctcacacctggtctgaagatcaacaggctggaaacgatccgttcgccacctatcgtgcac
ggtaaccaggatgtgctattggcagagctcggtattaaggatgccattgacagggtctac
gaaagtggcgacatcagcaatgatgatttcagcaagattctggacgcgctcgcgttggga
gatggtccggcagatgcacgacgcgcgaatgcgttcgtcatctaccttggtatacaagct
acaacgtcctcgtcggtcttctcatctgcagcgccgcccgctcgcttgctcgaacgcctc
ctccgcgagagccgcccagctgcccgttacgagctgatatcggcaatgatcaatcaggtc
cgctacgtcaacgcgcacacgcactacttctcgactgcgctacagcacatgttcacggta
gcggcggaagacttacaagaacagattatgcgcgtcatgatggagcggctcatagtgccg
agaccgcacccgtgggggatcatcgtgatgatactggagttggtaaagaactcaacgacg
gatctgtgggagctgccatggttgaggaatgcgtcccaagtgcagagcatgctgatgaat
ctggcccagagcgctccgagccaaggcccgggaatgttaccaggacgcttgccgcggagt
ccgttgggaccaccaacgatgcttcaacactaa
DBGET
integrated database retrieval system
