Bradysia coprophila: 119066557
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Entry
119066557 CDS
T08269
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119066557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoo03021
]
119066557
Enzymes [BR:
bcoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119066557
Transcription machinery [BR:
bcoo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119066557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119066557
NCBI-ProteinID:
XP_037024998
LinkDB
All DBs
Position
IV:604714..611173
Genome browser
AA seq
1619 aa
AA seq
DB search
MAQHSCHLDLTNFRFNIFTPAETELLSVAKIENDHLVDAAGFPIPGGLYDPAMGPYDYDS
GSCQTCGNSFVDCVGHMGHIKLCKPVYNRIFGRAVYSIMRMSCLHCFKLQLPDEEIEILR
LQLRLTELGYVRESQELEIMKASLMMSSAERENKVAEYEALIEKNQPNPDCRTKTTEEQR
MSLVNPVILSRPKSKNCIHCRQVLSTFKYTQNRLIRSVLKAELQQTLGVEAARAADVPVL
PEECRDYLRNIYKQNPDLLNLLFPSLKAHNKLPHPVDICFTDIIPVTPINTRPQLKVEGG
RTTKHHEQTQMYINIILENSTLKLIMDQADKFAAENILNEKMLKAWQKLQSCVDQLWDEK
MGFERGFKGLKQLIEKKEGIIRMHMLGKRVNFAGRTVITPDPYINVDEIGIPEVFAKQLT
YPVPVTEWNADELRKYVINGPNVHPGAKFIEEGSSNKIIPGHSKAVRESMAKTLLVSNGP
KVVHRHLLNGDILLLNRQPSLHRPSIMAHKVKVMKHEKTLRLHYSNCKSYNADFDGDEMN
CHCPQNELARSEAYNLVNVANNFLVPKDGTPLGGLIQDHVVAGVKMTMRGRFFNREDYHQ
LVFVALSHIKRDLELLPPAIIKPVALWSGKQILSTIIKNISPKNKGINLKSTIKITSRMW
ETSEPREMLAGGTRLRDNEMTETEVIIRGGDIVAGVFDKTHFGATPHGLIHCMYELYGGA
VSSQLLSSFSKLFTFFLQREGFSLGVHDILVTPKADKKRKKYLKKIEKIGVDIVAGALEC
DPNISSSELAVKMEEEYNRNPHFRTILDRHYKGGLGLYVNKINKVCVPDGLLCKFPENNL
QLMVGSGAKGSSVNTVQISGSLGQMELEGKRPPLMISGKSLPSFNAFETSPKSGGFIVGR
YMTGISPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLLVHYDMTVRDSDKCV
VQFMYGEDGMDTMKVPFLNSKHIAFLDANRHVIENEEVDEKLQNDYEIERKIQKHKKSIK
SWAKKHGSNPARRSYFSQFIDDQGVGVDDKREILDKWTQMLENDAGLKAKYKKMNMKRPD
PAISKYQQDNYFGVISERLEWLINLHCKDNDIREKSKFKSLIYKKSMMSLASPGEPVGLL
AAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLKEILMTASKQLKTPSMDIPFKAGTTP
RMAEKLRLKLIRVTVADVLESVKVKTYISLSAGRVRKCVLKFNFLERDLYRDEYCVKPKH
IRGYVEKKFFKSMFRAIEKSSDAEPNIVKSKKVANTNRGAEDGDEDEADGDEDENVEGGK
DRYQGLSGSEASDNEDDDAGAAKKKRQNDDEQDYDESENESGDEPDDQDDSKDNDIDEIM
PSRMEEGGVSEIDYKNAREYVLSTYSNVKEYEFDKDNELWCKLTFDLPLTSKNIDFSTLL
REVARTSVIHEVKGIKRAITHPKDKDLILRTDGINITEMFKYDEILDLNRLYTNDIHTVA
MTYGIEAATRVIVREIQFLFSQYGIVVDPRHLLLIADYMTFTGRFQPLSREGMKYSASSL
QRMSFEAPIQPLQSATVFNYSDNLDSPASRIMVGKPCQGGTGLCSIIFKNTQVTNKKNC
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacattcgtgtcatctggacctaacgaatttccgtttcaatatttttaccccg
gcggagaccgaactgttaagtgttgcgaaaatcgaaaatgaccatttggtggatgcagcc
ggttttcccattccgggtggtttatacgatcctgcaatgggaccgtacgattatgattcc
ggatcatgccaaacgtgtggcaactcatttgtggactgtgttggtcatatgggacacatt
aaattgtgtaaaccggtctacaatcgaatttttggtcgagccgtttacagtatcatgcga
atgagctgtctgcattgcttcaagctgcagttgccagatgaagaaattgaaatccttcga
cttcaactacggctcaccgaattgggatacgttcgtgaatcgcaggaacttgaaataatg
aaggcatcgctgatgatgtcctctgcagaacgggaaaataaagtcgcggagtatgaagct
ctcatcgagaaaaatcaaccgaatccggattgccgtacaaaaacaaccgaagaacaacga
atgtcacttgttaatccggtcattctaagccgacctaagtcgaaaaattgtattcactgc
agacaggtgttgtctacctttaaatacacacagaacagactgatacgcagcgttctcaaa
gcggaactacaacagactctcggtgtcgaagctgcccgagcagcagatgtgccagtgcta
ccagaggagtgtcgagattatctacgcaacatctacaaacaaaatccggacttgttaaac
cttctctttccatcattgaaggctcacaataaattaccgcatcctgttgacatttgcttc
acggacatcattcctgtgacaccaatcaacacacgaccgcaactgaaagtcgaaggtggc
cgtaccactaagcaccacgaacagacgcagatgtacatcaacattattttggagaattca
acgttaaaattgatcatggaccaggcggacaagtttgcagcggagaatatactgaacgag
aaaatgttgaaggcttggcagaagttgcagtcgtgcgtcgaccagttgtgggacgagaaa
atgggattcgaaagaggtttcaagggcttgaaacagttaatcgagaagaaggaaggaatc
attcggatgcacatgctcggaaagcgcgtcaactttgcggggcgtacggtcattactcca
gatccctacatcaatgtcgatgaaatcggtatacccgaagtgtttgccaaacaactaacg
tatccggttcccgtgacagagtggaatgccgatgagctgcgtaaatacgtgattaatggt
ccaaacgtgcatccaggcgccaaattcatcgaggaaggaagcagcaacaaaataattccc
ggtcacagtaaggctgtacgggagagtatggcaaaaacacttctcgtcagcaatggaccg
aaagtcgttcatcgtcacttgttgaacggcgacattctactgctaaatcgtcaaccatcc
ctgcatcggccgagtataatggcgcacaaagtgaaagtaatgaaacacgagaagacgttg
cgtttgcactattccaactgcaagtcgtacaacgccgatttcgatggagacgaaatgaat
tgtcactgtccgcaaaatgaactggctagaagtgaagcttacaatttggtcaatgtggcc
aataattttctggtgcccaaagatggtacaccgttgggaggattgattcaagatcatgta
gttgctggcgttaaaatgacaatgcgcggacggtttttcaatcgagaggactaccatcaa
ttggtgttcgttgcacttagccacataaaacgagacctggaattgttaccaccagcgatc
attaagccggttgctctatggtctggcaaacagattttatcgacgataatcaaaaatatt
tcgccgaagaacaagggaatcaatctcaaatcgaccatcaagatcacgtcacgcatgtgg
gagacaagtgaaccgcgtgagatgttagctggtggcaccagattaagggacaatgaaatg
acggaaacggaagtgattatacgtggtggggatattgtggctggtgtctttgacaaaaca
cattttggtgccacaccacacggtctgattcactgcatgtacgagttgtatggcggggcg
gtgtccagtcaattgctttcatcgttttcgaaattattcactttcttcctgcaacgggaa
ggtttctcgctaggcgtgcacgatatattggtgacgccaaaggctgataagaagaggaag
aaatatttgaagaaaatcgaaaagatcggcgtggatattgttgccggagcattggaatgc
gatccgaatatttcgtcatcggaattggccgtcaaaatggaagaagagtacaacaggaat
cctcatttccgaacgattttggatcgtcactacaaaggtggtctgggtctctatgtgaac
aagataaacaaagtttgtgtacccgacggtctactgtgtaaatttcccgagaacaattta
cagttgatggttggatctggtgccaagggatcgtccgtcaacacggtacaaatttccggt
tcattgggacaaatggaattggaaggtaaacgtccgccgctcatgatttccggtaaatcg
ttgcccagtttcaatgcattcgagacatctccgaaatctggtggtttcattgttggtcgt
tacatgactggcatttcgccgcaagaatttttcttccattgcatggctggtcgagaaggt
ttgatcgatacagccgtcaaaaccagtagatccggttacttgcaacgatgccttgtcaag
catttggaagggcttctcgtgcattatgacatgactgtgagggacagtgataaatgcgtc
gttcagttcatgtacggagaagatggaatggacacgatgaaggtgccatttttgaattcg
aagcacattgccttcttggacgccaatcgtcacgtaattgaaaacgaggaagtggacgag
aaattgcagaatgactacgagatcgagcgcaaaattcagaagcacaagaaatcgatcaaa
tcgtgggcgaagaaacatggcagcaatccggcacgccgaagctatttctcgcagttcatc
gacgatcaaggtgtcggagtcgatgataaaagagaaattctggacaaatggacacagatg
ctggagaacgacgctggcttgaaagcgaagtataaaaaaatgaacatgaaacgtcccgat
ccggcaataagtaagtatcagcaagacaattactttggtgtgatttccgaacgattggaa
tggttgatcaacctgcactgcaaagacaacgacataagggaaaaaagcaaattcaagtcg
ctgatatacaagaaaagtatgatgtcgctagcatcgccgggagaaccagttggtttattg
gcagcacagtccattggagaaccatccacccagatgacattgaacacattccattttgcc
ggacgaggtgaaatgaacgtgacacttggtatccctagactgaaggaaatcctaatgaca
gcatcaaagcaactcaaaacgccgtcgatggatattccgtttaaggcgggcacaacacca
cgaatggctgaaaaacttcggttgaagttgatccgtgtgacagtggcggatgttttggaa
tcggttaaagtgaaaacctacatatcgctttcggcgggacgagttcgaaagtgcgtgttg
aagttcaacttcctcgaacgagacctgtaccgagatgagtattgcgttaagccgaaacac
attcgtggctatgtcgagaagaagttcttcaagtccatgttcagagcaatcgaaaaatca
tcggacgctgaaccaaacatcgttaaaagcaaaaaagtggcaaacacaaaccgaggtgcc
gaagatggtgatgaggacgaagctgatggggatgaagatgaaaatgttgaaggcggaaaa
gatcgctatcaaggattgtcgggaagtgaggcatcggataatgaggatgatgacgctggt
gctgctaaaaagaaacgacaaaacgacgacgaacaagactacgatgaatcggaaaatgaa
tctggagacgagccagatgatcaagacgacagcaaggataacgacatcgatgaaatcatg
ccgagtagaatggaagagggtggagtttcggaaattgattacaagaatgctagagagtat
gtgctgagcacttacagtaacgtcaaggaatatgaattcgataaggacaatgagctgtgg
tgcaagttgactttcgatttaccgctgaccagcaaaaatattgatttttcaacgcttctg
cgggaagtggctcgcacgtctgttatacacgaggtgaagggtattaaacgagccattact
catcccaaggataaagacttgatactgcgaacggatggtatcaacataacggaaatgttc
aaatacgacgaaattttggatttgaatcgtctgtacaccaacgacattcatacggtggca
atgacctatggcattgaagcggcaactcgagtcattgtcagggaaattcagtttctcttt
tcccaatacggaattgtggttgatcctcgacatttgctactgattgctgattatatgaca
tttaccggtcgtttccaaccactgagtcgtgaaggaatgaaatattcagcgtcatccctg
caacggatgtcgtttgaggctcccattcaaccgttacaatcggctacagttttcaattac
tcagataatttggattcgccggccagtcgtatcatggttggcaagccatgccaaggagga
actggattgtgttcgataattttcaaaaatacgcaagtgacgaataagaaaaattgttaa
DBGET
integrated database retrieval system
