Bradysia coprophila: 119070888
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Entry
119070888 CDS
T08269
Name
(RefSeq) Bloom syndrome protein homolog
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03440
Homologous recombination
bcoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119070888
03460 Fanconi anemia pathway
119070888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcoo03032
]
119070888
03400 DNA repair and recombination proteins [BR:
bcoo03400
]
119070888
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119070888
DNA replication proteins [BR:
bcoo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119070888
DNA repair and recombination proteins [BR:
bcoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
119070888
Bloom's syndrome complex (BTR)
119070888
FA (Fanconi anemia) pathway
119070888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
119070888
NCBI-ProteinID:
XP_037031304
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Position
IV
Genome browser
AA seq
1406 aa
AA seq
DB search
MSSKKIHLSLNRDIKQPNLTNFFLSKVKSQDNSTDGSQSQGSSSPSVSKKKDWINTDAFN
NKTESFSSSIVSISDSDEGTPIKLDPKKFDSDDDMFESASRDGCSYASKKNVTKMLEQYE
SPKKQRIDVTLKLTPEEKMLFREAQEMDPQFLDANRKLEESLRKCNGSKFRFNVPMSKNK
SGADSSQSNETISVIDASVVNLNSSHDLFDEMVAAKKTTNGVLDSGNRNQSLNDKSRSST
NGLDKSFDQLINDSVTFTSLSDITASESNPPNNETNSVPTTKPSESVRRNNKFVFRTATT
SKAAGSHTEGKAVDSERSNPTSRPTATIPKSKNHDHDKYDVDAVLKELSYENHLPIGANR
TRPSSPLKNTHQQAKKPAKPSTVRRKDLENSYDDEFSTSDFSFSTSRISLPSSTSTCLTS
PAANTVDKTSSKDPKTRTGFENLQNVLNRISNSPAVKTTSNPSHSTLEELHKYNVQLMES
CCDIIDQLPSEAYKTLFGDKVNDFVQLRSLRSRVKAKIVKFDKLLQNETAVPATRPKPVS
EYQQTPTPVAKPSFDFDDEEEICPDLMDFLKLNEEERDSWGRLDEINGSSFASSSGTTTS
NINRNSTYQERDISIIDLDSPSVSRSTATASNTTLMGKFQSHIQNDGITGEFDGYGYAHS
QRLKDCFKANFGLVVFRPNQLQVINATLTGKDCFVLMPTGGGKSLCYQLPALLNPGVTIV
ISPLKSLILDQVNKLQSLDIHAEHMSGDLSHADFRRISDNLNRNPPTIKLLYITPEKLFS
SESLPRLLHMLHSKKYLARFVIDEAHCVSQWGHDFRPDYKKLYTLRQDYPNVPLMALTAT
ATPRVRTDILKQLNLVQCKWFLCSFNRPNLQYVVKPKAGGPATIKDIVETVKKSPKASGI
VYCLSRKECDETADKLLECGIRASSYHAGMTDKNREQVQKDWISERVKIVCATIAFGMGI
DKADVRFVFHYSMPKSIEGYYQESGRAGRDGQKSLCILYYNYSDMLRYRKMIQRDNSSGS
YESRQVHINNLYKIVEYCENVIDCRRTLQLNYFAEQFSREQCLAVRDMACDNCLKRDCFK
VFDVTEDCKTIAKAVRDLCSGNNRFTMTHIVDVLKGGSSQKVVSSRHNESPYHGHLKKWQ
MNDIKRLLHRMITDEYLREDLIFCRDIPNAYLKIGTNIEKLMKSGVRIEFAISDEKKKKA
TSLDVVTTATPSTDTDEIKLDAPTEKLIKELQDRCHNDLLAIVQKLANQRQCTMGNIMNL
LTIKEMSIQLPSTEEEMLQLPHVTKANFEKFGKELLETTCVYAAEKLGILMDYKETLGTG
SGQSSNTANNQIYDSDDDGTNWSNLAAESSQSGSGAKRKRNWPAKGRYGGAAKRKKTNTP
KKRRAGARKKTPAKAKRALGFLTPKF
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaagaagatacatttatctttgaacagggatattaagcaaccgaatttaacg
aatttcttcctatcaaaagtgaaatcgcaggacaatagtaccgacggatcgcaaagtcag
ggctcgtcatctccaagtgtgtcaaagaagaaggattggattaacacagacgccttcaac
aacaaaacggaatcgttctcatcatcaatagtatcgatcagtgatagcgatgaagggaca
ccaatcaaactcgatccaaaaaaatttgattcagacgatgacatgttcgaatcagcgtct
cgtgacggttgctcctatgcttccaagaaaaatgtgacaaaaatgttggagcaatatgaa
agtccgaagaaacagcgaatcgatgtaacgttgaaattaacgccggaagaaaagatgctt
ttcagagaggcacaggaaatggatccacagtttctggatgccaatcggaagttggaagaa
agtttaaggaaatgtaatggaagtaagtttcgatttaacgtgccaatgagcaaaaacaaa
tctggagccgactcaagccagtcgaacgaaacaatctcggtcatcgatgctagtgtagtg
aatctcaattcgtcgcacgatcttttcgatgaaatggtcgcggcaaagaaaacaaccaat
ggcgtgctcgacagtggaaatagaaatcaatctttaaatgataagtctaggtcatcaacg
aatggattagataaaagttttgaccaactaattaacgatagcgttacgtttacatcacta
tcggatatcacagcttccgaatcaaatccaccaaacaacgagactaattcagtgccaacc
acaaaaccatcggaatcagtcagaaggaacaacaaatttgtttttaggacagcaactact
tcgaaagcagctggtagtcatactgaaggcaaggctgtcgattctgagcggagcaatcca
acctcgcgaccaacagcgacaataccgaaatcaaaaaatcatgaccatgacaagtacgac
gtcgatgccgttttgaaggaattaagttatgaaaatcatcttccgattggagctaatcga
acaagaccgagttcaccattgaagaatactcatcaacaagcgaagaagccggcaaaacca
tcgactgttcggcgaaaggacttggaaaacagctatgacgatgaattttctacgtcagac
ttttcgttttcaacgagcagaatatcgttaccatcatcgacctcaacgtgccttacctca
cctgctgccaataccgtagacaagacatcaagtaaagatccgaaaacgagaacaggtttc
gagaatttgcaaaatgttttgaatcgaatttcgaatagtccggctgtgaaaaccacatcg
aacccaagtcattccacattggaagaactgcacaaatacaatgtccaattgatggaatca
tgctgtgatataatcgatcaactgccatccgaagcgtataagacccttttcggcgacaaa
gtgaatgatttcgttcaactcagaagtctacgctcgagagtcaaggcgaaaattgttaaa
ttcgacaaattgctacaaaatgaaacagcagtgcctgcaacccgaccgaaaccagtgtct
gaataccaacaaacaccgactcctgtcgccaaaccgtcttttgattttgatgatgaggaa
gaaatttgtcccgatcttatggatttccttaaattaaacgaagaggaaagagattcgtgg
ggacgactagatgaaatcaacggttcatcatttgcctctagtagtggaactactacatcc
aacatcaaccgaaactcaacatatcaagaacgagacatttcaataatcgacctggacagt
ccttccgtttcccgatcaactgcaaccgcttcaaacacaacactgatgggaaaatttcag
tctcacattcaaaatgacggcataaccggagaattcgacggctacggttatgcacattcg
caaaggctaaaggattgtttcaaagcgaattttggtctcgtcgttttccgcccgaatcaa
ctgcaagtcatcaatgcgacgttgacgggcaaagattgtttcgttctgatgccgacagga
ggaggaaaatcgttatgctaccagttgccggccttgttaaatcctggcgttaccattgtc
atcagtccactcaagtcgttgatattggatcaagtaaacaaacttcagtcgttagatatt
catgccgagcacatgtcgggtgatttaagtcacgctgatttcagacgaatttccgataat
ctcaaccggaatccgccaacgataaaacttctctacattacaccggaaaaactgttcagt
tcggaaagtcttccgcggttattgcacatgctgcactccaaaaagtaccttgctcgtttt
gttatcgacgaggcgcattgtgtatctcaatggggccacgacttccgtcccgattacaaa
aagttgtacacacttcgccaagactacccgaatgttccactcatggcactaaccgcaaca
gctactcctcgcgtacgcacagacatcctgaaacaattgaatttggtgcagtgcaaatgg
tttttatgcagtttcaatcgaccgaacttacagtacgttgtgaaaccgaaggctggtgga
ccggcaacgatcaaggacattgttgaaacggtgaaaaagagtccgaaggcatctggaatc
gtgtactgtctttcgcgtaaagaatgtgacgaaactgcggacaaattgcttgaatgcggc
attagagcgtccagttatcatgcgggaatgactgacaagaatcgggaacaggttcaaaag
gattggatttcggaacgggtgaagattgtttgtgcgaccatagcatttggaatgggtatt
gacaaagcagacgtgaggtttgtgttccactactccatgccgaagtctatcgaaggatat
tatcaggagtcgggtcgcgctggccgcgatggtcagaaatcgttatgcattttgtattac
aactacagcgacatgctacggtaccgcaagatgattcagagagacaattcatccggatcg
tacgaatcgcggcaagttcacatcaacaacctgtataagattgtagagtattgcgaaaac
gtcatagactgtcgtcggacgctgcaactgaattactttgctgaacagttctcccgggag
cagtgtctagctgttcgtgatatggcgtgtgacaattgtcttaaacgtgactgcttcaag
gtctttgatgtaacagaggattgtaaaactattgcaaaggcggtacgagatctatgcagc
ggcaacaatagatttacaatgacccacatcgttgatgttttgaagggcggatcaagtcaa
aaagtcgtatcgtcgcggcacaatgaaagtccatatcatggacacttgaaaaaatggcaa
atgaatgacatcaaacgtttattgcatcgcatgatcaccgacgagtatctgcgtgaagat
ttgattttctgccgggacattccgaatgcctacctgaaaattggcaccaacatcgaaaag
ttgatgaaaagtggcgttagaatcgaatttgctatatccgatgaaaagaagaagaaggca
accagtttggacgttgttacgacggccacaccatcaacggatacggatgaaattaaattg
gatgctcctacggaaaaattgatcaaagaactgcaggacagatgccataacgatttgctg
gctatagtccagaagcttgccaaccagcgtcaatgcaccatgggcaatatcatgaatctc
ctgacgatcaaagaaatgtctatacaattgccgtccaccgaagaagaaatgcttcaatta
cctcacgtaactaaagctaatttcgagaaattcggcaaggaattgttggagacgacttgt
gtttatgcggccgaaaaattgggcattttaatggactacaaagaaacacttggaacggga
tcgggacagtcgtcgaatactgccaacaatcaaatttacgattccgacgacgatggaacg
aattggagtaatttggcggccgaaagctcgcaatctggatcgggtgcaaagcggaaacgc
aattggccggcgaaaggtagatacggtggagcggcgaaacggaagaaaactaatacgccg
aagaaacggagagctggtgcgcggaaaaagactcctgcaaaagccaaacgagctttgggt
tttcttacgccaaaattttga
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integrated database retrieval system