KEGG   Bradysia coprophila: 119073390
Entry
119073390         CDS       T08269                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
bcoo  Bradysia coprophila
Pathway
bcoo03040  Spliceosome
bcoo04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bcoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119073390
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119073390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bcoo03041]
    119073390
   04121 Ubiquitin system [BR:bcoo04121]
    119073390
   03400 DNA repair and recombination proteins [BR:bcoo03400]
    119073390
Enzymes [BR:bcoo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119073390
Spliceosome [BR:bcoo03041]
 Complex B
  Other components
   Prp19 complex
    119073390
 Complex C
   Prp19-CDC5 complex
    119073390
Ubiquitin system [BR:bcoo04121]
 Ubiquitin ligases (E3)
  U-box type E3
   119073390
DNA repair and recombination proteins [BR:bcoo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    119073390
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Prp19 Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_Aladin NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_SPT8 U-box Beta-prop_RIG_2nd Beta-prop_DCAF4 PEP5_VPS11_N Tricorn_2nd Beta-prop_WDR35_TULP_N Cytochrom_D1 PAS_11 B-prop_COPA_B_2nd Fez1 zf-Nse DUF6192 TPR_MLP1_2
Other DBs
NCBI-GeneID: 119073390
NCBI-ProteinID: XP_037034711
LinkDB
Position
Unknown
AA seq 503 aa
MALICSITNEVPEQPVISPLSGAIFERRIIEKYILENGCDPVNGKELKVEELIEIKTPPI
VKPKPPSATSIPATLKTMQDEWDALMLHTFTQRQQLQTARQELSHALYQHDAACRVIARL
NKEVTAAREALATLKPQAGILSSAMQQQSHRMEVNGAENQAAEQIGMTEDVIQKLQDKAT
VLTQERKRRGRNVPEELYTPEQVRNFRILASHPGLHSASIPGILTLDINSSDHSKLVTGG
NDKNATVFNKDTEQIVAVLKGHTKKVTKVIYHAEEDTVITASPDTSIRIWHVPTSQTQLL
LSCHSGPVTGLSLHPTGDYILSTSSDKHWAFSDIRTGRLLTKVIDTAEAGLTTAQFHPDG
LIFGTGADDSRVKIWDLKEQSNVANFPGHTGSISAISFSENGYYLATAAYDACVKLWDLR
KLKNFKTIQLDDGYEVKDLCFDQSGTYLAIAGTDVRIYQCKQWQELQVFSDHTALATGVR
FGKNAQYLASTSMDRTLKLYGVE
NT seq 1512 nt   +upstreamnt  +downstreamnt
atggctttaatttgttcaataacaaatgaagtgcccgaacagccggtgatttcaccttta
tctggggctatatttgagagacgtataattgaaaagtatattttggagaatggatgcgat
ccagttaatggtaaagagctgaaggtcgaagaattaattgaaattaaaacaccaccaatc
gttaagccgaagccaccgagtgcaactagcattccagctactttaaaaaccatgcaggac
gaatgggatgcactgatgttgcacacgttcactcaacggcaacagttgcaaaccgctcgt
caagagcttagtcacgctttatatcaacacgatgcggcgtgtcgagtcatagcacgtcta
aacaaggaagtaactgctgcacgtgaagctttggccactctgaaacctcaagctggcatt
ttatccagtgctatgcaacaacaatctcatagaatggaagttaatggagctgaaaaccag
gctgctgaacagatcggtatgacagaggatgttatccaaaagttgcaagacaaggcaacc
gttcttacacaagagcgtaaacgacgtggtcgtaatgtgccagaagagttatacactcca
gagcaagttcgtaacttcagaattttggcatcacatccaggtctacattccgcaagtatt
cctggtattttgacgttggatatcaacagttctgatcacagcaagttggttactggcgga
aacgataagaacgcaactgttttcaacaaggatacggaacaaatcgtggcagttttgaag
ggacacaccaaaaaggttaccaaagtcatttatcatgctgaagaagatacggtcattact
gcatctcctgatacatcgatccgtatctggcatgttccaacgtcccaaactcaattgcta
ttgagttgccattcgggtccagtaactggattgtcacttcatccgactggtgattacata
ctatccacatcatctgacaaacattgggctttctccgatattcgtaccggacgtttgtta
actaaggtaatcgatactgccgaggctggattaactactgcccaattccatcctgacgga
ttgattttcggaacgggcgctgacgattctcgagtaaagatttgggatttgaaggagcag
agtaatgtggccaatttcccgggacatacgggttccatttcggcaatttcgttttcggaa
aatggttactatctggccaccgcagcttatgatgcttgcgttaaactttgggatttgaga
aaattgaaaaatttcaagaccattcaactggacgatggttacgaagtcaaggatttgtgc
ttcgaccagagtggtacatatttggctattgccggtaccgatgtcaggatttaccaatgc
aaacagtggcaagagctgcaggtattcagtgatcatacggctctagcaaccggtgttcgc
ttcggtaaaaatgcgcagtatttggcatcgacaagcatggatcgtacgctcaaattgtat
ggggtggaataa

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