Bifidobacterium coryneforme: BCOR_0346
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Entry
BCOR_0346 CDS
T03236
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bcor
Bifidobacterium coryneforme
Pathway
bcor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BCOR_0346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcor03021
]
BCOR_0346
03400 DNA repair and recombination proteins [BR:
bcor03400
]
BCOR_0346
Enzymes [BR:
bcor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BCOR_0346
Transcription machinery [BR:
bcor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BCOR_0346
DNA repair and recombination proteins [BR:
bcor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BCOR_0346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AII74366
UniProt:
A0ABD4AE21
LinkDB
All DBs
Position
444830..448396
Genome browser
AA seq
1188 aa
AA seq
DB search
MAANKAARSTTTTYARADEDQIGLHKASDRVNFGSIREPIEVPYLLGVQTDSFDWLVGNE
RWKKQVEEDAANGTHTVPTVSGLDEVFQEISPIENFAQTMSLTFSDPYFEEPRHTVQECK
EKDYTYSAPLYVNAEFENGDTGEIKSQTVFMGDFPLQTPHGTFIIGGSERVIVSQLVRSP
GVYFDRTPDRTSDKEIFGAKIIPSRGAWLEFEIDKRDVLGVRVDRKRKQSAIVFLMAIGM
TKPQIRKAFKGYPLVLDALEKETIETQDEALTDLYRKIRPADTASAEAGRNLLDSFYFNT
KRYDLARVGRYKINRKLGLEADFNDRSLHPEDIIATLKYLVTLHSGDQTFPGTRDGKEIE
LRVDVDDIDHFGNRRIRQVGELIQNQLRTGLSRMERVVRERMTTQDAEAITPQSLINIRP
VNATIKEFFGTSQLSQFMDQNNPLAGVTNKRRLSALGPGGLSRDRASMEVRDVHPSHYGR
MCPIESPEGPNIGLIGSLATFARVNPFGFIETPYRKVVDGQVTDEVVYMTADQEAEHTIA
QANQEIDDTGHFVEDEALVRDAEAEAKDVPISEVDLMDVSPRQMVSVGASLIPFLEHDEG
HRALMGTNMQRQAVPLVKSERPLVGTGSEWRSAIDSGDVILAEKPGVVTYVSADMIRVMN
DDGTQSSYKLAKFQRSNQTTCYNQVPLIKDGERVEAGTVLADGPATEKGEMALGKNLLVA
FMPWNGYNYEDAVIISQRLVQDDTLSSIHIEEYETDARETKLGAEEITRDLPNVGEDAVA
NLDERGIIRIGAEVEAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLRVPHG
ETGTVIEVKEITREDAEEDGDELPNGVNRMIRVYIAQHRKITQGDKLSGRHGNKGVISRI
MPEEDMPFMADGTPVDIMLNPLGVPSRMNLGQVLELHLGWIAHSGWDISLDPDLEAEWKK
HIPAGAEKGEAGTAVATPVFDGVRQDALNGLLKTTLPNRDGERLVGDDGKAVLYDGRTGE
PFTKPISVGYMYMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLHEMMTTKSDDVDGRVRAYGAIVRGENLPAAGIPESFKVLLKEMQSLSLNVEV
LNAEGNVIEMKDEDDDPNAASNDLGFNIGARPDAAAKADQSTPEPEYR
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
ttggctgccaataaagctgcaagaagtaccaccacaacatacgcacgcgctgatgaggat
cagatcgggctgcacaaggcttcggaccgtgtgaatttcggttccatccgcgaacccatc
gaggtgccctacctgctgggtgtccagaccgacagcttcgactggctggtcggcaatgag
cgctggaagaagcaggtcgaagaggacgcggccaacgggacccataccgtccccacggtt
tccggactggatgaggtcttccaggagatctcccccatcgagaactttgctcagaccatg
agcctgaccttctcggatccctacttcgaggagccccgccacaccgtccaggagtgcaag
gaaaaggactacacctattcggcacccctctatgtgaacgccgaattcgagaatggcgac
acgggcgagatcaagtcccagaccgtattcatgggcgacttccccctccagaccccccac
ggcaccttcatcatcggtgggtccgagcgcgtcatcgtctcccagctggttcgttccccg
ggcgtctacttcgaccggaccccggaccgcacctccgacaaggagatcttcggagccaag
atcatccccagccgcggagcctggctggagttcgaaatcgacaagcgtgatgtgctgggc
gtgcgggtggaccgcaagcgtaagcagtccgccatcgtcttcctcatggccatcggcatg
accaagccgcagatccggaaggccttcaagggctacccgctggtccttgatgccctggag
aaggagaccatcgagacccaggacgaggccctgaccgatctgtacaggaagatccgcccc
gccgacaccgcctctgccgaggccggccggaacctgctggattccttctacttcaatacc
aagcgctacgacctggcccgcgtcggtcgctacaagatcaaccggaagctgggtctggaa
gccgacttcaacgaccgcagcctccaccccgaggacatcatcgccaccctgaagtacctg
gtgaccctccactcgggtgatcagaccttccccggaaccagggacggcaaagagatcgag
cttcgagtcgatgtggacgacatcgaccacttcggcaaccgccgcatccgtcaggttggc
gagctgattcagaaccagctccgcaccggcctgagccgtatggagcgcgttgtcagggaa
aggatgacgacccaggacgccgaggccatcaccccccagtccctgatcaacatccgtccg
gtcaacgccaccatcaaggagttcttcggaacctcccagctgagccagttcatggatcag
aacaatcccctggcaggcgtgaccaacaagcgtcgtctctcggccctgggccccggcggc
ctctcccgtgaccgtgcctccatggaggtgcgcgatgtgcacccgtcccactacggacgt
atgtgccccatcgagtctcccgaaggcccgaacatcggtctgatcggatccctggcgacc
ttcgcccgggtcaaccccttcggcttcatcgagaccccctaccgcaaggttgtggacggt
caggtgaccgacgaggtggtctacatgaccgcagaccaggaggccgagcacaccatcgcc
caggccaaccaggagattgacgacaccggtcacttcgtcgaggacgaagccctggtgcgt
gacgccgaggccgaggccaaggatgtgccgatttccgaggtcgacctgatggatgtctcg
cccaggcagatggtttccgtgggcgcctccctgattcccttcctggagcacgacgagggc
caccgagcgctgatgggcaccaacatgcagcgtcaggccgtccccctggtcaagtccgag
cggcctctggtcggtaccggttccgagtggcggtccgccatcgattccggtgacgtcatc
ctggccgagaagccgggcgtggtcacctacgtctccgccgacatgatccgcgtcatgaat
gacgacggcacccagtcctcctacaagctggccaagttccagaggtccaaccagaccacc
tgctacaaccaggtcccgctgatcaaggacggggagagggttgaagccggtaccgtcctg
gccgatggtcccgccaccgagaagggcgagatggcactgggcaagaacctcctggtggcc
ttcatgccttggaacggctacaactatgaggacgccgtcatcatctcccagcgtctggtc
caggacgacaccctgagctccatccatatcgaggagtatgagaccgacgcccgcgagacc
aagcttggtgccgaggagatcacccgcgacctgcccaacgtcggcgaggatgcagtggcc
aaccttgacgagcgaggcatcatccgtatcggtgccgaggttgaggccggcgatatcctg
gtcggcaaggtcacccccaagggcgagaccgagctgacccccgaggagcgactcctgcgc
gccatcttcggcgagaagagccgcgaggtgcgtgacaccagcctcagggttccccacggc
gagaccggcacggtcatcgaggtcaaggagatcacccgcgaggatgccgaagaggacggc
gacgagctgcccaacggcgtcaaccggatgatcagggtctacatcgcccagcaccgtaag
atcacccagggcgacaagctgtcgggtcgtcacggcaacaagggcgtcatctcccggatc
atgccggaagaggatatgcccttcatggccgacggcacccccgttgacatcatgctcaac
cccctgggcgtgccctcccgaatgaacctgggacaggtcctggagctccacctgggatgg
atcgcccattccggctgggacatcagcctggatccggacctggaggccgagtggaagaag
cacatcccggccggagccgaaaagggcgaggccggtaccgccgtggccaccccggtcttc
gacggtgtgcggcaggacgccctgaacggcctgctcaagaccaccctgcccaaccgtgac
ggtgagcgcctggtaggcgacgacggcaaggccgtgctctacgacggccgcaccggtgag
cccttcactaagccgatttccgtgggctacatgtacatgctcaagctccaccacctggtg
gacgacaagatccacgcccggtccaccggcccctactccatgatcacccagcagcccctg
ggcggtaaggcccagttcggcggccagcgcttcggcgagatggaggtctgggccctggag
gcctacggtgccgcctacaccctgcacgagatgatgaccaccaagtccgacgacgtggat
ggtcgtgtgcgggcctatggtgccatcgtgcgtggcgagaacctcccggcggcaggcatc
ccggagtccttcaaggtgctcctcaaggagatgcagtcgctctccctgaacgtggaggtg
ctcaacgccgaaggcaacgtcatcgagatgaaggacgaggacgacgaccccaacgccgca
tccaacgacctgggcttcaacatcggagcccggcccgacgcagcggccaaggccgaccag
tccactcccgaaccggagtatcgctga
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integrated database retrieval system
