Beutenbergia cavernae: Bcav_3155
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Entry
Bcav_3155 CDS
T00893
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bcv
Beutenbergia cavernae
Pathway
bcv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bcav_3155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcv03021
]
Bcav_3155
03400 DNA repair and recombination proteins [BR:
bcv03400
]
Bcav_3155
Enzymes [BR:
bcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bcav_3155
Transcription machinery [BR:
bcv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bcav_3155
DNA repair and recombination proteins [BR:
bcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bcav_3155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ACQ81399
UniProt:
C5C0K3
LinkDB
All DBs
Position
complement(3509803..3513312)
Genome browser
AA seq
1169 aa
AA seq
DB search
MAASRTPSNADAIATRTASRRVSFAKITEPLQAPDLLSLQTNSFDWLLGNERWRARVDAA
ASKNVSVPSSSGLEEIFSEISPIEDFGGSMSLSFRDHRFEPAKYTPEECKEKDFTYSAPL
FVTAEFVNYTTGEIKSQTVFMGDFPLMTERGTFIINGTERVVVSQLVRSPGVYFERTPDK
TSDKDVFTAKIIPSRGAWLEFEIDKRDAVGVRVDRKRKQSITVFLKALGLSEAEIREQFA
DYPVVIETLEKDTVNTREEALLDIYRKIRPGEPPTVEAGAALLENFYFNPKRYDLAKVGR
YKIDKKLGLDAPLTDSVMQVADVVATIKYLAALHKGVTELTGTRSGEEVALRVETDDIDH
FGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFG
TSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRASMEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLATYARINPFGFVETPYRKVVKGKVTDDVVYLTADDEDRHVIAQANAPLSEKS
TFVEATVLVRTRGGEAELVPAAEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQ
RQAVPLVRSEAPLVGTGMERRAAVDAGDVIVAAKPGVVAEVSADAIVVAQDDGTTFTYKV
AKFHRSNQGTSYNQRVLVSEGARVEVGSVLADGPATDEGELALGRNLLVGFMSWEGHNYE
DAIILSQRLVAEDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRI
GAEVGAGDVLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGTVIGVRE
FNREDGDELPPGVNQLVRVYVAQRRKITDGDKLAGRHGNKGVISKILPIEDMPFLSDGTP
LDIVLNPLGVPGRMNVGQVLETHLGWVAKQGWDAGIEDAKKGKLPSWAQHLDRGALQGEP
GTPVATPVFDGVREDELAGLLDSTLVTRDGERLVDSSGKALLFDGRSGEPFPEPIAVGYM
YILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQEL
LTIKSDDVPGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGTSIEMR
DTDEEVYRAAEELGIDLSRRPDASSVEEI
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcctcgcgcaccccttcgaacgctgacgccatcgctacccgtactgcctcgcga
agggtttccttcgcgaagatcacggagccgctccaggcaccggatcttctgagcctccag
accaacagcttcgactggctgctcggcaacgagcgctggcgcgctcgggtcgacgcggcg
gcgagcaagaacgtctcggtcccctcgtcgtcgggcctcgaggagatcttctccgagatc
tccccgatcgaggacttcggcgggtcgatgtcgctctcgttccgcgaccaccgcttcgag
ccggcgaagtacacgccggaggagtgcaaggagaaggacttcacctactccgcgccgctc
ttcgtgaccgccgagttcgtcaactacacgaccggcgagatcaagtcgcagaccgtgttc
atgggcgacttcccgctgatgaccgagcgcggcacgttcatcatcaacggcaccgagcgc
gtcgtcgtcagccagctcgtgcgttcgccgggcgtctacttcgagcgcacgcctgacaag
acgtccgacaaggacgtcttcaccgcgaagatcatccccagccgcggcgcgtggctcgag
ttcgagatcgacaagcgtgacgccgtcggcgtgcgcgtcgaccgcaagcgcaagcagtcg
atcaccgtcttcctcaaggcgctcggcctgtccgaggcggagatccgcgagcagttcgcc
gactacccggtcgtgatcgagacgctcgagaaggacacggtcaacacccgtgaggaggcg
ctgctcgacatctaccggaagatccggccgggcgagccgcccacggtcgaggccggcgcc
gcgctgctcgagaacttctacttcaacccgaagcgctacgacctcgcgaaggtcggtcgc
tacaagatcgacaagaagctcggcctcgacgcgcctctcaccgactcggtgatgcaggtc
gccgacgtcgtcgccacgatcaagtacctcgccgcgctgcacaagggcgtcacggagctc
accggcacgcgttccggcgaggaggtcgccctgcgcgtcgagaccgacgacatcgaccac
ttcggcaaccgccgcatccgcgccgtcggcgagctcatccagaaccaggtccgcaccggg
ctgtcgcgcatggagcgggtcgtccgcgagcggatgacgacgcaggacgtcgaggcgatc
acgccgcagaccctgatcaacatccgccccgtggtggcgtcgatcaaggagttcttcggc
acgtcgcagctgtcccagttcatggaccagaacaacccgctcgcgggcctgacgcacaag
cggcgtctgtcggccctcggccccggcgggctgtcccgtgaccgcgcctcgatggaggtc
cgggacgtccacccgtcgcactacggccgcatgtgcccgatcgagacgccggaaggcccg
aacatcggcctcatcggttcgctcgcgacgtacgcgcgcatcaacccgttcgggttcgtg
gagacgccgtaccgcaaggtcgtcaaggggaaggtgacggacgacgtcgtctacctcacg
gccgacgacgaggaccgccacgtcatcgcccaggccaacgcgccgctgtcggagaagagc
acgttcgtcgaggccaccgtcctggtgcgcacccgtggcggcgaggcggagctcgtcccg
gccgccgaggtggactacatggacgtctcgccgcgccagatggtgtcggtcgcgacggcg
atgatcccgttcctcgagcacgacgacgcgaaccgcgcgctcatgggcgcgaacatgcag
cggcaggcggtgccgctcgtccggagcgaggcgccgctggtcggcaccggcatggagcgt
cgtgcggccgtcgacgccggcgacgtcatcgtcgccgcgaagccgggcgtcgtcgccgag
gtgtcagccgacgcgatcgtcgtcgcccaggacgacgggacgacgttcacgtacaaggtc
gcgaagttccaccgctcgaaccagggaacctcctacaaccagcgtgtgctggtctccgag
ggcgctcgggtcgaggtcggctcggtgctcgcggacggcccggcgacggacgagggcgag
ctggcgctcggccggaacctcctcgtgggcttcatgtcctgggaggggcacaactacgag
gacgcgatcatcctgtcgcagcgcctcgtggccgaggacgtgctctcctcgatccacatc
gaggagcacgaggtcgacgcccgcgacacgaagctcggccccgaggagatcacgcgggac
atcccgaacgtctccgaggaggtcctggcggacctcgacgagcgcggcatcatccggatc
ggtgccgaggtcggtgcgggcgacgtgctcgtcggcaaggtcaccccgaagggcgagacc
gagctgaccccggaggagcggctgctccgcgcgatcttcggcgagaaggcgcgcgaggtc
cgcgacacgtccctcaaggtgccgcacggcgagtccggcacggtcatcggcgtgcgcgag
ttcaaccgggaggacggcgacgagctgcctccgggcgtgaaccagctcgtgcgggtgtac
gtggcgcagcgccggaagatcaccgacggcgacaagctcgccggccgtcacggcaacaag
ggcgtcatctcgaagatcctcccgatcgaggacatgccgttcctgtccgacggcacgccg
ctcgacatcgtgctcaacccgctcggcgtgccgggccggatgaacgtcggccaggtcctc
gagacgcacctcgggtgggtcgccaagcagggctgggacgccgggatcgaggacgccaag
aagggcaagctcccgagctgggcgcagcacctcgaccgtggcgcgctccagggcgagccg
ggtacgccggtcgccacgccggtcttcgacggcgttcgcgaggacgagctggcgggtctc
ctggactccacgctcgtcacgcgtgacggcgagcggctcgtggactccagcggcaaggcg
ctgctgttcgacggtcgcagcggtgagccgttcccggagccgatcgccgtcggctacatg
tacatcctcaagctgcaccacctggtcgacgacaagatccacgcgcgctcgaccggtccg
tactcgatgatcacgcagcagccgctgggcggtaaggcgcagttcggcggtcagcggttc
ggcgagatggaggtgtgggcgctcgaggcgtacggcgcggcctacgcgctgcaggagctc
ctcaccatcaagtccgacgacgtcccgggccgcgtgaaggtctacgaggcgatcgtcaag
ggggagaacatccccgaacccggcatcccggagtccttcaaggtcctcatcaaggagatg
cagtcgctctgcctgaacgtggaggtgctgtccagcgacggcacgtccatcgagatgcgc
gacaccgacgaggaggtgtaccgggccgccgaggagctcgggatcgacctctcgcggcga
cccgacgccagcagcgtcgaagagatctga
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