Borrelia crocidurae: Q7M_456
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Entry
Q7M_456 CDS
T02051
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bcw
Borrelia crocidurae
Pathway
bcw02020
Two-component system
bcw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q7M_456
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q7M_456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcw03021
]
Q7M_456
Transcription machinery [BR:
bcw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q7M_456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_11
MarR
HTH_36
HTH_24
CBM_3
HTH_IclR
HTH_27
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AFI31235
UniProt:
I0FCM9
LinkDB
All DBs
Position
complement(475024..476280)
Genome browser
AA seq
418 aa
AA seq
DB search
MLKQNLKLTHKLQLTQINTIKMLSLDKQELIQIISDEVDNNEYIKVDSNKIFFESLKTYK
FKKFFYKENENNKTQYEIALAKTSPKISLKEHLLLQLRIQRLNEEEINIGEIIINNLNRK
GLYIINPYDFFNKEEWPQVTKMIKLIQQFDPIGICVPNIIESLILQAKYHNLDTNIIKIL
QKADLLTNTQEKLKKELNISTQDLNDAINTMKLKLNPNPTFEFKDKDDTNEYIEPDIIVI
NKGNKLKIKIKEVSIFKTEINKQEVKNLCKYKQAKWLIEALRYRDETLAKIGIAIYTLQK
EFLKRGFKSLRPMKLDDISTRINLSKSTISRAIKNKYLKFDWGTIAIKKLFNSIGGAKTN
EFSKLSIKLIIKGMLEQNKNMVDSQISDILKSKGITISRRTVNKYRNELKCEGEIYGT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaaaacttaaaattaacacacaaattacaattaacacaaattaacacaatt
aaaatgttaagtcttgataagcaagaattaatacaaattatatcagacgaagttgataat
aatgaatatattaaagtggattcaaataaaatcttttttgaatcactaaaaacttataag
tttaaaaaatttttttataaagaaaatgaaaataacaaaacacaatatgaaattgcactg
gctaaaacatcacctaaaatttcacttaaagaacatcttttattacaacttagaattcaa
agacttaatgaagaagaaattaatataggagaaatcataataaacaatttaaatagaaaa
ggactatacataataaatccttacgatttctttaataaagaagagtggccacaggtcact
aaaatgatcaaattaattcaacaatttgatccaataggaatttgcgtacccaatataata
gaatcattaatattacaagcaaaataccataacttagatacaaatataattaaaattctt
caaaaagcagatttacttacaaatactcaagaaaaattaaaaaaagaattaaacattagc
acacaagatttaaatgacgccattaatacaatgaaacttaaacttaatcccaatccaaca
tttgaatttaaagacaaagacgatactaatgagtatattgaaccagatattattgttatc
aataaaggcaataaactcaaaatcaaaattaaagaagtcagtatttttaaaacagaaatt
aataaacaagaagttaaaaacttgtgcaaatacaaacaagcaaaatggctcattgaagct
ttaagatatagagatgaaacactagctaaaataggaatagcaatatacacattacaaaaa
gaattcttaaaaagaggatttaagagcttaagaccaatgaaattagatgatatatctaca
agaatcaatctatcaaaatcaactatatcaagagcaataaaaaataaatatttaaaattt
gactggggcacaatagcaattaaaaaattatttaattcaataggtggtgctaaaacaaat
gaattttccaaattaagcattaaactaataataaaaggaatgctagaacagaataaaaat
atggtagatagccaaatttctgatatactaaaatctaaaggaatcactatttcaagaaga
actgtaaacaaatataggaatgaattaaaatgtgaaggagaaatttatggaacctaa
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