KEGG   Cytobacillus dafuensis: FSZ17_10265
Entry
FSZ17_10265       CDS       T06982                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bda  Cytobacillus dafuensis
Pathway
bda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FSZ17_10265 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bda03019]
    FSZ17_10265 (rny)
Messenger RNA biogenesis [BR:bda03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FSZ17_10265 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B DUF4407 KH_NusA_2nd KH_2
Other DBs
NCBI-ProteinID: QED50079
UniProt: A0A5B8ZDZ6
LinkDB
Position
2170460..2172028
AA seq 522 aa
MDDLILAIIISSLLGLFVGAVVSYFVSKSIAQAKIAGAKDSADQILEDANREAEALKKEA
LLEAKDEIHKLRSEAEREIRDRRNELQKQENRLLQKEENLDRKDETLDKRETLLEKRDDS
LNKRQQHIEEMESKVDEMVRAQQAELERISGLTREEAKSIILERVEQEVAHDVALMIKES
EIRAKEEADKKAKDILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLET
LTGIDLIIDDTPEAVILSGFDPIRRETARLALDKLVQDGRIHPARIEEMVDKARREVDEH
IREIGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAQLSGLLAAELGQDE
TLARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAV
LVAAADALSAARPGARRETLENYIRRLEKLEEISESYEGVEKSFAIQAGREIRILVKPEQ
IDDLEAHRLARDIRKKIEEELDYPGHIKVTVIRETRAVEYAK
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggatgatttaatattagcaatcatcatctccagtttgcttggcctattcgtcggtgca
gttgttagttattttgttagtaagtccattgctcaagcaaagattgcaggagccaaggat
tctgcagatcagattttggaagatgcaaaccgtgaagcagaagctttaaagaaagaagca
ttgctagaggcaaaggatgagattcacaagcttcgttctgaagcggagcgtgaaattcgt
gatcgaagaaatgagcttcaaaaacaagaaaatcgtttactacaaaaagaagaaaatctt
gatcgtaaagatgaaacgttagataagcgtgaaacacttttagagaagagggacgattct
cttaacaaaagacaacagcatattgaagagatggaaagcaaagtggacgagatggtacga
gcacaacaagctgagctggaacgcatctcgggcttaactcgtgaagaggcaaagtccatc
attttggagcgagtcgagcaggaagtggctcatgatgtcgcgttaatgatcaaagagagc
gaaattagagcgaaagaggaagccgataagaaggcgaaagatattttgtcactggcaatc
caacgatgcgcagcggatcatgttgcggagacaactgtttcagttgtcaaccttcctaat
gatgagatgaaaggtcggatcatcggaagagaaggccgaaatatccgaacgctagaaacg
ctgacaggaattgatctcattattgatgatactccagaagcagtcatcttatctggattt
gatccaattcgccgtgaaactgctcgtttagctttagacaagcttgttcaggatggacga
attcatcctgcacggattgaagaaatggttgataaggcacgccgagaagtagatgagcat
atccgtgaaattggtgaacagactacatttgaagttggtgttcatggacttcatccagat
ctcattaaaattctaggtcgacttaaatttagaacaagttatggccagaatgtattaaag
cattcaatggaagtagcgcaattatcgggactgcttgctgctgaattgggacaagatgag
acgttggcacgccgtgcaggtttactccatgatattggaaaagcaatcgaccatgaagtt
gaaggaagccatgttgaaattggtgttgagcttgctacaaaatataaagagcacccagta
gttattaacagtattgcttcacatcatggggacactgagcctacttcaattattgccgtt
ttagtggctgcagctgatgcactttctgcagcgagacctggagcaagaagagagactctt
gaaaactatatccgtcgtcttgaaaagcttgaggaaatttctgaatcttatgagggtgta
gaaaaatcatttgctattcaagctggccgagaaattcgtatcttagtaaaaccagagcaa
atcgatgatcttgaagcacatcgactagcaagagatataaggaaaaagatagaagaagag
cttgattatccaggacatattaaagtaacggttattcgtgaaacacgagccgtggaatat
gcaaaataa

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