Cytobacillus dafuensis: FSZ17_10265
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Entry
FSZ17_10265 CDS
T06982
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bda
Cytobacillus dafuensis
Pathway
bda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSZ17_10265 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bda03019
]
FSZ17_10265 (rny)
Messenger RNA biogenesis [BR:
bda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FSZ17_10265 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
DUF4407
KH_NusA_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
QED50079
UniProt:
A0A5B8ZDZ6
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Position
2170460..2172028
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AA seq
522 aa
AA seq
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MDDLILAIIISSLLGLFVGAVVSYFVSKSIAQAKIAGAKDSADQILEDANREAEALKKEA
LLEAKDEIHKLRSEAEREIRDRRNELQKQENRLLQKEENLDRKDETLDKRETLLEKRDDS
LNKRQQHIEEMESKVDEMVRAQQAELERISGLTREEAKSIILERVEQEVAHDVALMIKES
EIRAKEEADKKAKDILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLET
LTGIDLIIDDTPEAVILSGFDPIRRETARLALDKLVQDGRIHPARIEEMVDKARREVDEH
IREIGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAQLSGLLAAELGQDE
TLARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAV
LVAAADALSAARPGARRETLENYIRRLEKLEEISESYEGVEKSFAIQAGREIRILVKPEQ
IDDLEAHRLARDIRKKIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttaatattagcaatcatcatctccagtttgcttggcctattcgtcggtgca
gttgttagttattttgttagtaagtccattgctcaagcaaagattgcaggagccaaggat
tctgcagatcagattttggaagatgcaaaccgtgaagcagaagctttaaagaaagaagca
ttgctagaggcaaaggatgagattcacaagcttcgttctgaagcggagcgtgaaattcgt
gatcgaagaaatgagcttcaaaaacaagaaaatcgtttactacaaaaagaagaaaatctt
gatcgtaaagatgaaacgttagataagcgtgaaacacttttagagaagagggacgattct
cttaacaaaagacaacagcatattgaagagatggaaagcaaagtggacgagatggtacga
gcacaacaagctgagctggaacgcatctcgggcttaactcgtgaagaggcaaagtccatc
attttggagcgagtcgagcaggaagtggctcatgatgtcgcgttaatgatcaaagagagc
gaaattagagcgaaagaggaagccgataagaaggcgaaagatattttgtcactggcaatc
caacgatgcgcagcggatcatgttgcggagacaactgtttcagttgtcaaccttcctaat
gatgagatgaaaggtcggatcatcggaagagaaggccgaaatatccgaacgctagaaacg
ctgacaggaattgatctcattattgatgatactccagaagcagtcatcttatctggattt
gatccaattcgccgtgaaactgctcgtttagctttagacaagcttgttcaggatggacga
attcatcctgcacggattgaagaaatggttgataaggcacgccgagaagtagatgagcat
atccgtgaaattggtgaacagactacatttgaagttggtgttcatggacttcatccagat
ctcattaaaattctaggtcgacttaaatttagaacaagttatggccagaatgtattaaag
cattcaatggaagtagcgcaattatcgggactgcttgctgctgaattgggacaagatgag
acgttggcacgccgtgcaggtttactccatgatattggaaaagcaatcgaccatgaagtt
gaaggaagccatgttgaaattggtgttgagcttgctacaaaatataaagagcacccagta
gttattaacagtattgcttcacatcatggggacactgagcctacttcaattattgccgtt
ttagtggctgcagctgatgcactttctgcagcgagacctggagcaagaagagagactctt
gaaaactatatccgtcgtcttgaaaagcttgaggaaatttctgaatcttatgagggtgta
gaaaaatcatttgctattcaagctggccgagaaattcgtatcttagtaaaaccagagcaa
atcgatgatcttgaagcacatcgactagcaagagatataaggaaaaagatagaagaagag
cttgattatccaggacatattaaagtaacggttattcgtgaaacacgagccgtggaatat
gcaaaataa
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