Bifidobacterium dentium Bd1: BDP_1988
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Entry
BDP_1988 CDS
T01143
Symbol
gatB
Name
(GenBank) GatB Aspartyl/glutamyl-tRNA(Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00970
Aminoacyl-tRNA biosynthesis
bde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BDP_1988 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
bde03029
]
BDP_1988 (gatB)
Enzymes [BR:
bde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
BDP_1988 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
BDP_1988 (gatB)
Mitochondrial biogenesis [BR:
bde03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
BDP_1988 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YqeY
Motif
Other DBs
NCBI-ProteinID:
ADB10561
UniProt:
D2Q6M0
LinkDB
All DBs
Position
complement(2254748..2256244)
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AA seq
498 aa
AA seq
DB search
MAEKLMKYADAVKKFDPVIGLETHVELSTTTKLFCPAEVSFGGAPNSQLTPVSLGLPGSL
PVLNKTAVDYAIKLGLALHCEIAEWSQFSRKNYFYPDMPRDYQISQYDKPTNGNGYLDVE
LEDGTVFRVLIERAHIEDDAGKNTHVGGADGRIEGANHSLVDYNRAGVPLIEIVTKPIEG
AGERAPEIAGAYVRAIRDIVRALNISHARMEQGNMRADVNVSLRNSPSDPFGTRSETKNV
NSFRGIEKTVQYEIRRQAQILSEGGEILQETRHWDEASQTTAGGRVKSDADDYRYFPDPD
LVMLHITKEHIEEMKAQMPEMPRERRNRLKGEWGFNDLEMRDVLNADALDLLEETVKAGA
SAAGAKKWWLGELSREANAKGVSLEELPIAPSDVAEVEKLIADGKLNDKLAKQTVAGVLT
GEGAPAEVVKKHGFQVVSDDGALEKAVDEALAANPDIVEKLKGGNMKPMGAIIGAVMRAT
RGQADAKAVTKIVMGKIK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagttgatgaagtacgccgatgccgtcaagaagttcgatccggtcatcggc
ttggaaacccacgtggagttgtccaccaccaccaagctgttctgcccggccgaagtctcc
ttcggcggtgccccgaactcccagctcaccccggtgagtctgggactgccgggctccctg
ccggtgctgaacaagaccgccgtcgactacgcgatcaagctgggtctggctctgcactgc
gaaatcgccgagtggagccagttctcccgcaagaactacttctatccggacatgccgcgt
gactaccagatctcgcagtacgacaagccgaccaacggcaatggctacttggatgtggaa
cttgaggatggcaccgtcttccgtgtgctgatcgaacgcgcgcacattgaggatgacgcc
ggcaagaacacccacgtcggcggtgccgacggccgtatcgaaggcgccaaccactccttg
gtcgactacaaccgtgccggcgtgccgttgattgagatcgtgaccaagccgatcgagggt
gcgggcgagcgcgctccggaaatcgcgggcgcctatgtgcgtgccattcgcgacatcgtg
cgtgcgttgaacatctcccatgcccgcatggagcagggcaatatgcgtgccgacgtgaac
gtgtcgctgcgcaacagcccgtccgatccgttcggaacccgctccgagaccaagaacgtg
aactcgttccgtggcatcgagaagaccgtgcagtatgagattcgccgtcaggcgcagatt
ctttccgaaggcggcgagatcctgcaggagacccgccactgggatgaggcttcgcagacc
accgcaggcggccgtgtgaagtccgacgccgacgattatcgttacttcccggatccggat
ttggtgatgctgcacatcaccaaggagcacatcgaagagatgaaggcccagatgccggaa
atgccgcgcgagcgccgcaatcgtctgaagggcgagtggggcttcaacgatctggagatg
cgcgacgtgctcaacgccgatgccttggatctgcttgaggagaccgtcaaggccggtgcg
agcgccgcaggtgccaagaagtggtggctgggcgagctgtcccgcgaggccaatgccaag
ggtgtgagccttgaggagctgccgatcgctccgtccgacgtggctgaggttgagaagctg
atcgccgacggcaagctcaacgacaaactcgccaagcagaccgtcgccggcgtgcttacc
ggtgagggtgccccggccgaggtcgtcaagaagcacggcttccaggtcgtctccgatgat
ggcgcgctggaaaaggccgtcgacgaggctctggccgctaatccggacatcgtcgagaag
ctcaagggcggcaacatgaagccgatgggcgcgatcatcggtgccgtcatgcgcgccacc
cgcggtcaggccgacgcgaaggccgtcaccaagatcgtgatgggtaagatcaagtaa
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