Burkholderia diffusa: WI26_10920
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Entry
WI26_10920 CDS
T04698
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bdf
Burkholderia diffusa
Pathway
bdf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WI26_10920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdf03019
]
WI26_10920
03016 Transfer RNA biogenesis [BR:
bdf03016
]
WI26_10920
Enzymes [BR:
bdf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WI26_10920
Messenger RNA biogenesis [BR:
bdf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WI26_10920
Transfer RNA biogenesis [BR:
bdf03016
]
Prokaryotic type
tRNA degradation factors
WI26_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AOI58072
UniProt:
A0A1B4BTU0
LinkDB
All DBs
Position
1:complement(2365316..2367463)
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AA seq
715 aa
AA seq
DB search
MSMFNKVVKEFQWGQHKVRLETGEVARQASGAVIVDVEDTVVLATVVGAKSAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYIDNAYVLNPTREQLKASSLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVRDGGKPEWDWQPAPK
NEALIARVTELAHGDLLAAYQLRDKQARSTKLKEVYAATSAKLEEDALAAGTVAADKATV
GNILFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVK
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSSEGMAEAKKRIENITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAASQADTPPQQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaaggtcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggtgaagtcgctcgccaggcgagcggtgccgtgatcgtcgacgtggaagacacc
gtcgtgctggcaaccgtcgtcggcgcgaagtcggcgaagccgggccaggatttcttcccg
ctgaccgtcgactacctcgaaaagacctactcggccggcaagatcccgggcggtttcttc
cgtcgcgaaggccgtccgtcggagcacgagacgctgacgtcgcgcctgatcgaccgtccg
ctgcgcccgctgttcccggaaggcttctacaacgaagtgcaggtcgtgatccacgtgctg
tccgtgaatccggaaatcccggcggacatccccgcgctgatcggtgcatcggctgcgctc
gccgtgtcgggcctgccgttcaacggtccggtcggcgccgcgcgcgtcgcgtacatcgac
aacgcatacgtgctgaacccgacgcgtgagcagctcaaggcatcgagcctcgatctcgtc
gtcgccggtacggagcgcgcggtgctgatggtcgaatcggaagccgaccagctgccggaa
gacgtgatgttgggcgcggtcgtgttcggccacgagcagatgcagacggcgatcgacgcg
atccacgaactcgtgcgcgacggtggcaagcccgagtgggactggcagccggcgccgaag
aacgaggcgctgatcgcgcgcgtgacggaactggcccacggcgacctgctcgccgcttac
cagctgcgcgacaagcaggcgcgctcgacgaagctgaaggaagtctacgcggcgacctcg
gcgaagctcgaggaagacgcgctggcggccggcacggtcgcggccgacaaggctaccgtc
ggcaacatcctgttcgacatcgaagcgaagatcgtgcgttcgcagatcctgaacggcgag
ccgcgcatcgacggtcgcgacacgcgcacggtgcgtccgatcgagatccgcactggcgtg
ctgccgcgcacccacggctcggcgctgttcacgcgtggcgaaacccaggcgctcgtcgtt
gcgacgctcggcacgaagggtgacgagcagatcatcgacgcgctcgaaggcgaataccgc
gagcgcttcatgctccactacaacatgcccccgttcgcaaccggcgaaacgggtcgcgtc
ggctcgccgaagcgtcgtgaaatcggtcacggccgtctcgcgaagcgcgcactggtcaag
tgcctgccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcaccgag
tcgaatggttcgtcgtcgatggcgtcggtgtgcggcggctgcctcgcactgatggacgcc
ggcgtgccgatgaaggcgcacgtcgcgggtatcgcgatgggcctgatcctcgaaggcaac
aagttcgcggtgctgaccgacatcctgggcgacgaggatcacctcggcgacatggacttc
aaggtggccggcacggagcaaggcgtgacggcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggtcgcatgcacatc
ctcggcaagatgacgtcggcagtttcgggcgcgaacacgcaactgtcggaattcgcgccg
cgcatgatcacgatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgattcgcgcgctgaccgaagaaaccggcacgaccatcgacatctcggatgacggc
gtcgtgacgatcgcgagcacgagcagcgaaggcatggccgaggcgaagaagcgcatcgag
aacatcacggccgagatcgaagtcggccaggtgtacgaaggcacggtgctcaagctgctc
gatttcggcgcgatcgtgaacctgctgccgggcaaggacggcctgctgcatatctcggaa
atcgtcaacgagcgcgtgaaggacatcaacgactacctgaaggaaggccagcaggtgaag
gtcaaggtgatccagacggacgagaagggtcgcgtgcgtctgtcggcgaaggcgctgctg
aacgaagcggcggcagcgtcgcaggcggatacgccgccgcagcagtaa
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