Brachypodium distachyon (stiff brome): 100829297
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Entry
100829297 CDS
T01717
Name
(RefSeq) ABC transporter B family member 11 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100829297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdi02000
]
100829297
04147 Exosome [BR:
bdi04147
]
100829297
04090 CD molecules [BR:
bdi04090
]
100829297
Enzymes [BR:
bdi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100829297
Transporters [BR:
bdi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100829297
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100829297
CD molecules [BR:
bdi04090
]
Proteins
100829297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
RsgA_GTPase
AAA_21
AAA_16
AAA_15
Zeta_toxin
AAA_23
DUF87
AAA_30
AAA_24
YobI-ATPase
DLIC
Motif
Other DBs
NCBI-GeneID:
100829297
NCBI-ProteinID:
XP_003569618
LinkDB
All DBs
Position
2:complement(47486303..47495050)
Genome browser
AA seq
1309 aa
AA seq
DB search
MRIYSASTITRDRNHTRSTQCGRRLVQQAHHQRYQEMDATAATGTGTSSGEARHHGDQQG
KDGRPEKDAAGKKVPLLSMFRYADRLDVLLIMVGTVGAMGNGMSEPLISVLFGNVINSFG
ESTSSTVLRSVTKVVLNFIYLGIGTAVASFLQVSCWTMAGERQSARVRSFYLKSVLRQDI
AFFDTEMTTGEAVSRMSSDTVIIQGALGEKAGKLVQLSSGFLGGFIIAFTKGWLLTLVML
TSLPLVAIAGAVSAQLLTRASSKRLTSYSDAGDTVEQTIGSIRTVVSFNGEKKAMAMYNN
FIKRAYKTIIEEGLINGFGMGSVFCILFSSYGLAFWYGGKLIIDKGYTGGTIITILFAVL
TGATSLGNATPSISAIAEGQSAAYRLFETIERKPDIDSDDTSGIVLENIKGDVKLKDVYF
RYPARQGQLILDGLSLQVASGTTMAIVGESGSGKSTVISLVERFYDPQAGEVMIDGINIK
NLRLDWIRGKIGLVSQEPLLFMTTIKDNIIYGKEDATLEEIKRAAELANAANFIDKLPNG
YDTLVGQRGTLLSGGQKQRIAIARAILKDPKILLLDEATSALDVESERIVQEALNRIMVE
RTTLVVAHRLSTVRNVDCITVVRQGKIVEQGPHYELVKDTNGAYSQLIRLQETRGDKRHK
IQDSGVPNTLSKSTSLSIRRSMSKDSFGNNNRYSFKNPLGLSIEFHEDESTGRNEKDELT
DGKALKKAPIGRLFSLNKPEVPFLLLGSIAAAVHGLIFPLFGILMSGVIKSFYEPPDKLQ
KDSRFWALISVVLGIASLISIPAEYFLFAIAGGKLIQRVRTLSFQNIVRQEVAWFDNPSN
SSGALGTRLSVDALNVRRLVGDNLAIIVQSIATLITGFAIAFSADWRLALVITCVIPLVG
AQGYAQVKFLKGFSEEAKEMYEDASQVATDAVGSIRTVASFSAEKRVVRTYNKKCEALRK
QGIRSGIVGGLGFGFSFLVLYLTYALCFYVGAQFVRQGKMTFADVFKVFFALVLAAVGVS
QASALASDATKARDSAISVFSILDRKSKVDSSSDEGLTLENITGNIDFCNVSFKYPSRPD
VQIFSDFTLHIPSRKTIALVGESGSGKSTIIALLERFYDPDSGRISLDGVEIKSISISWL
RDQMGLVGQEPVLFNDTIRANITYGKHGEVTEEEIMAVAKAANAHEFISSLPQGYDTFVG
EKGVPLSGGQKQRIAIARAIIKDPKILLLDEATSALDAESEHIVQDALDRVMVSRTTIVV
AHRLSTIKRADMIAVLKEGKIVEKGKHEALTRIKDGVYASLVELRSNSE
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatatatagtgcctccaccattaccagggacagaaaccacacacgatcgacacag
tgcggccggcggctcgtacagcaagcacatcaccaaaggtaccaggaaatggacgccaca
gcagcaactggtactggcactagtagtggagaagcgcgccaccacggcgatcagcaagga
aaggatggccggccggagaaggatgcggccgggaagaaggtgcccttgctcagcatgttc
aggtacgccgaccgcctcgacgtgctgctgatcatggtcggcacggtgggggcgatgggc
aacggcatgtcggagccactcatatcggtcctcttcgggaacgtcatcaactccttcggc
gagagcacgagcagcaccgtcctccgcagtgtaaccaaggttgtcctgaacttcatatat
ctgggcattggaacagcagttgcctcctttcttcaggtgtcatgctggacaatggcagga
gaaaggcagtcagcgcgggtccgttctttttacctgaaatcagttctgaggcaagatatt
gcattcttcgacacagaaatgacaactggtgaagcagtttctagaatgtctagtgatacg
gtcataattcaaggcgctcttggtgaaaaggcagggaagcttgtacaactctcatctggt
ttccttggtggttttataatagcattcacaaaaggctggcttctgactcttgtcatgcta
acatcactaccactagttgctattgccggtgcagtgtctgcgcagctactaaccagggct
tctagcaagagactaacatcatacagtgatgctggcgacactgttgagcagacaattgga
tctatacgaacagttgtgtccttcaacggtgagaagaaagctatggcaatgtacaacaat
ttcataaaaagggcatacaagacaattattgaggaaggccttatcaatggttttggcatg
ggctccgtcttttgcatcttatttagcagctatggactagccttctggtacggtggaaag
ctaattattgacaaaggttatactggagggacaatcatcactattttatttgccgtgttg
actggtgcaacttctttaggtaacgcaacaccatcaatttctgcaattgcagaaggtcaa
tctgcagcatacagactatttgaaacaatcgagaggaaaccggatatagattcagatgat
accagtggcatagttttagaaaatatcaagggtgatgttaagctaaaagatgtgtacttt
cgctaccctgcaagacaagggcagttaatattagatggattgtcattgcaagtagccagt
ggaacaacaatggccatagttggagagagtggaagtggcaagtcaactgttataagctta
gttgaaagattctatgatccacaggctggtgaagttatgatagatggaatcaacatcaag
aatctgaggcttgattggataagagggaagatcggtcttgtgagccaagaaccattgctc
tttatgaccaccattaaagataacataatctatggcaaagaagatgcaacacttgaagag
atcaagagagcagccgaacttgcaaatgccgcaaacttcatcgacaagttaccaaatggc
tacgacacactagttggtcagcgtggcactctgctttctggaggacaaaaacaaagaatt
gcaattgcaagggccatccttaaagatcccaaaatccttttgctagatgaagcaacaagt
gcattggatgtggaatctgagaggatagttcaggaggcactcaataggataatggtagaa
agaaccacactagtggttgctcatcgcttgagcactgtaaggaatgttgactgcatcaca
gttgttcgtcaagggaaaatagttgaacaaggtcctcattatgaattggtgaaggatacc
aatggagcttactcccagcttattaggctacaagaaactcgtggagacaaaaggcataaa
atacaagattctggagtgccaaataccttatcaaaaagcactagtttgtcaattcgacgg
tcaatgagtaaagattcttttggcaataacaacagatattccttcaagaaccctttagga
ttatctattgagtttcatgaggatgaaagcacaggcagaaacgaaaaggacgagcttacc
gatgggaaggcccttaagaaagcaccaattggtcgtcttttttctcttaataagccagag
gtaccatttcttctgctcggttctatagcggcagctgtgcatggactcattttcccactg
ttcggaatactaatgtctggtgttataaaatcattctatgagccacctgataagctgcaa
aaagattctagattttgggcactgatatctgttgttctggggattgcatctctgatttca
atcccagcagagtattttttgtttgcaattgctggaggcaagcttatacagcgtgtccgg
acactgtcatttcaaaacattgtgcgtcaagaagttgcttggttcgataatccctcaaat
tccagtggggcacttggcacaaggctctcagttgatgcattaaatgtccggcgcttagta
ggtgataacctggccattatagtccaatctatagctacattaattactggctttgccata
gctttttcggcggattggaggcttgcattggttatcacttgtgtcatccctttagtgggt
gcacagggttatgctcaagtgaagttcttgaaggggtttagcgaagaagctaaggagatg
tatgaagatgcaagccaagttgcaactgatgctgttggtagtatcagaacagtagcatct
tttagtgcagagaaaagagtggtcagaacatataacaagaaatgtgaagctttaaggaaa
cagggaattcgaagtggaatcgttggagggcttggttttggtttctcattcttggtgtta
tatctcacatatgctctatgtttctatgttggtgcacagttcgtacgtcaggggaaaatg
acgttcgcagatgttttcaaagttttctttgctttagttttggcagctgttggggtttca
caagcaagtgcattagcatctgatgcaacaaaggcgagggattctgccatttctgttttc
agtattctagatcggaagtccaaagttgattcaagcagcgatgagggcctaacgttggaa
aatattaccggcaacattgatttctgtaatgtcagtttcaagtacccatcacgccctgat
gtccaaatattcagtgacttcaccttgcacattccttccagaaagaccatagcacttgtt
ggagaaagcggaagtggcaagtctacaatcattgctttactggagcgtttctatgatcct
gattccggtagaatctcactagatggcgtcgaaattaaaagcataagcattagctggtta
agggatcaaatggggctggtaggccaggagccagttcttttcaatgacaccatccgggcc
aacataacatatgggaaacatggagaggtgacagaagaagagatcatggctgttgccaag
gcagcaaatgctcatgagttcatatcaagcttgccacaaggatatgacacttttgtcggc
gagaaaggagtgccactatctggtgggcagaaacagcgaatagcgatcgcaagggccatt
ataaaggaccccaagatactgctgcttgatgaggcaaccagtgccttggatgcagaatct
gagcatattgttcaagatgcattggaccgagtcatggtcagcaggaccaccattgtggtg
gcgcaccgcctctccacaattaaaagggctgatatgattgcagtcctcaaggaaggcaaa
attgtagaaaaaggaaagcatgaggccctgacgcgaatcaaggatggagtctatgcttcg
ctggttgaacttcgctcaaattctgagtag
DBGET
integrated database retrieval system