Brachypodium distachyon (stiff brome): 100829304
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Entry
100829304 CDS
T01717
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100829304
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bdi01009
]
100829304
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100829304
03036 Chromosome and associated proteins [BR:
bdi03036
]
100829304
Protein phosphatases and associated proteins [BR:
bdi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
100829304
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
100829304
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
100829304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
100829304
NCBI-ProteinID:
XP_024318021
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All DBs
Position
3:complement(4878194..4882783)
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AA seq
547 aa
AA seq
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MEAAPDLSAVAAVAYPAPSALALQVDLLQLPPEIPAPGAPALRGVLDRLFTHWLTLPDTV
ALVNCMAQKAKANGGGGAGFAGCAMLPSMMMQGGNVPPLSPRSPRLARKPSGLSGGQSNR
SASPLRPATARAVKEIIPQFYFRDGRPPPYEQKKQCIFVVDQLFAGHSNGLRIQEFRMVT
RELCKLPSFLTTVLFGKIDKENTEFVTRDAFMDFWVNSNMMTMDIATQVFMILKQDNHEY
LTKEDFKPVLRDLLDNHPGLEFLKSTPEFQERYAETVVYRIFYSLNRIGSGLLTLRELKR
GNLIDSLRHADDEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDKENLIKFGNHALT
YRIVDRIFSEVPRKFTSKVPGKMGYEDFVHFILSEEDKSSEPSQEYWFKCIDLDGNGILT
HNELQYFFEEQLHRMECMAQEPVLFEDILCQLVDMVGPEDDTFFTLKDFRRCKLSGHFFN
VLFNLNKFMAFEARDPFLIRQMREEPTLTDWDRFARREYIRLAMEEDGEDASNASGDVWD
ESLESPF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccggatctgagcgccgtggcggcggtggcgtacccggcgccgtcggcg
ctggcgctgcaggtggacctcctgcagctgccgccggagatccccgcgccgggggccccc
gcgctgcggggcgtcctcgaccgcctcttcacccactggctcaccctccccgacaccgtc
gcgctggtcaactgcatggcgcagaaggccaaggccaacggcgggggaggagcgggcttc
gccgggtgcgcgatgctgccgtccatgatgatgcaggggggcaatgtgccgccgctctcg
ccgaggtcgccccgcctcgcgaggaagcctagcgggctgagcggtgggcagtccaaccgc
tccgcgtccccgctccggccggccaccgcccgcgcggtcaaggagatcataccgcagttc
tatttccgagatgggcgcccaccgccatatgagcagaagaagcaatgcatatttgtagtt
gatcagctcttcgctggacactccaatggccttcggattcaagaatttcggatggttacc
agggagctctgcaagctaccgtcgttcttgaccactgttcttttcggaaagattgataag
gagaacactgaatttgtcacgagggatgccttcatggatttctgggtgaatagcaacatg
atgactatggacattgcaacgcaagtatttatgattttgaagcaagataatcatgagtac
ctcacaaaggaagatttcaaaccagttcttcgagatcttctggacaaccatcctggcctg
gagttcttaaagagcacgccggaatttcaagaaagatatgctgagactgtcgtatatagg
atattttatagcttgaatcgaattggaagtggccttctcactcttagggagctgaagcgt
ggaaatctgattgattcgctgcggcatgctgatgatgaagaggatatcaataaagttcta
aggtatttctcatatgagcatttctatgtgatatattgcaagttctgggagctcgacaca
gatcatgatttctttattgacaaagaaaatcttattaagtttggaaaccatgcgttgaca
tataggattgtagatagaattttctcagaggtgcctaggaaatttaccagcaaggttcca
gggaaaatgggttatgaagattttgttcatttcattttgtctgaagaggacaaatcatca
gaaccaagccaagaatattggtttaaatgtatagatttggatggcaacggcatactcaca
cacaatgaactacaatacttttttgaggagcaacttcatcgcatggaatgcatggcccag
gaacctgtactatttgaggacatcttgtgtcaactagttgatatggttggacctgaggat
gacaccttttttacattaaaagacttccggaggtgcaaattgtctggacatttcttcaat
gttctattcaacctcaacaaatttatggcgttcgaagctagagatcccttcctcatccgc
caaatgcgtgaagagccaaccttgactgactgggatcgttttgctcggagagagtatata
agattggcgatggaagaagatggtgaagatgcttcaaatgcaagtggagatgtttgggat
gagtcccttgaatctcctttctaa
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