Brachypodium distachyon (stiff brome): 100832973
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Entry
100832973 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100832973
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100832973
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100832973
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100832973
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100832973
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100832973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
100832973
NCBI-ProteinID:
XP_014756042
UniProt:
I1I8U5
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All DBs
Position
3:complement(42810710..42816345)
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AA seq
876 aa
AA seq
DB search
MGEDKRQVTTVEEEAAAEAAAKSPRKSPRLTAAVVPLAAVPLAAVSPESSESPSTQLDSS
ESTCSDDSQEHQHMFMTDEELAAIANNFKTAKEHPMCQHDDCKVTWKGASDGGGEDAGMM
LCTECGCHFCTGPVGDMLNPRGHAYWHAHEAMHRVALWYDDPYKAYCFDCEEGLTLGGNS
SQDKDAWAVVAKNGKDQWGSEDVGGHASGVAYVYGDGYVIRGILNLGSSCYMNASLQCLL
ALRKLRRMILGLDAWLGFTGHYLKELFVETGSANDATCLLNPRMLLDCVGGSGQQFKGNE
MEDTYEFLVSLRNALDKEVKELNDLNCVQGGAVLPEFGESIFRVQMCQTISCKSCPNNSV
QQIELYDLQAPVALPSKDPLARSVVSSPKIESHMSPRNICKKLFQETQKSDGEKLQTIAE
GCELGDGAMEKKPEPLQVDSTEMKDVVDDRLQTHENDGPREIVEVSIKALDFIPNLFDGI
EGVEIADSRNPKDIVPPLFTTEDKGKAQSSDIIPPIVSTEDKGKAKSCDIIPPLVITEDM
GKAQSSDIIHDVAEHMNSLSSIEDCLALLLIEQPVEWTCENCSNVAELRRTNSSKNGEQM
MGSTNVNTTVGGDQTEQADRKTCPSEQSVDLNRFSSECTSPSRRPHGLDAQDKVILYEDR
TTKGITSETSCDEKDSPSSSTGNKKSESHQGVQEAVLICLPTDKRTNMLVVQDSQDTSTE
NQGRGKQVKLDDHSVKQVDKDQNEQKNEDGGATQTILLTKLPPVLTIQLKRSAADLSKLV
GHVSFNEILHVGPFMDPSCEDKDNSSYRLVGVIEHIGSTLRGGHYIAYVRADRNQQSGSS
SWVCANDSSIREVSLQEVLRCEAYILFYERMEEEDD
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggacaagaggcaggttacgacggtggaggaggaggcggccgcggaggcggcg
gccaagagcccgcggaaatccccgcgcctgaccgcggccgtggtgccgctggccgcggtg
cccctggccgcggtgtcgccggaatcgagcgaatcgccatcgacacagctggattctagc
gagtccacatgttctgatgacagccaggagcaccagcacatgttcatgaccgacgaggag
ctggctgcgatcgcgaataacttcaagaccgccaaggagcacccgatgtgccagcatgac
gactgcaaggtcacctggaagggagcctctgatggcggcggtgaggacgccgggatgatg
ctatgcacggagtgcggctgtcatttctgtactgggccggtgggggacatgctaaatccg
agggggcacgcgtactggcacgcccatgaagccatgcaccgtgttgctctgtggtacgat
gatccgtataaggcatactgcttcgattgtgaagaaggtctgacgctcggtgggaacagc
tcccaggacaaagatgcgtgggcagtggttgccaaaaatggaaaggatcagtggggaagc
gaagatgtaggtggccatgcatctggggttgcttatgtttatggggatggatatgttatc
agagggattctaaatcttggaagctcatgctacatgaatgcatcgctgcagtgcctcctt
gcgcttcgtaagctgaggagaatgattttaggactggatgcttggttggggttcactgga
cattacctgaaggagttgtttgttgagacaggcagtgcaaatgatgccacatgcttgcta
aatccacgtatgctattggattgtgtggggggatctggccagcagttcaagggcaacgag
atggaagacacctacgagtttcttgtgtctttgcgcaatgctttagataaggaggtgaag
gagctaaacgatttgaattgcgtgcaagggggtgcagtgttgcctgaatttggcgaatcc
attttcagggtccagatgtgtcaaaccatatcctgcaaaagttgcccgaataattcagtt
caacaaattgagttatatgatctccaggcacctgtggcattgccatcaaaggatccacta
gcaagaagtgttgtgtcatcaccaaagatcgagagccacatgtctccaaggaatatttgc
aagaaactatttcaagaaactcaaaagagtgatggagaaaagcttcaaacaattgctgaa
ggttgtgaactgggagatggggccatggagaaaaaacccgagcctttgcaagttgattct
actgaaatgaaggatgttgtagatgatcgtttgcagactcacgagaatgatggcccaaga
gagatcgttgaggtgtctataaaagctcttgatttcattcctaacttgtttgatggcatt
gaaggagtggaaatagcagattctcgcaatccgaaagatatagttcctccactgtttaca
accgaagacaaggggaaagctcagagtagtgatattattcctccaattgtttcaacagaa
gacaaggggaaagctaagagctgtgatattattcctccacttgttataacagaagacatg
gggaaagctcagagcagtgatattattcatgatgtcgcagaacatatgaactctctttcg
tcgattgaggactgcctggcactgcttttgattgaacaaccggtagaatggacttgcgag
aactgttccaatgttgctgagctgcggagaacgaacagtagtaaaaatggtgaacagatg
atgggaagtactaatgtaaatacaacagttggtggagaccagactgaacaggccgacagg
aaaacatgcccaagtgagcaatctgttgatttgaacaggttctcatcagaatgtacttct
ccaagtaggcgaccacatggtttggatgcacaggataaagttatactctatgaggacaga
actactaaaggaatcacttcagagacgagttgtgatgaaaaggactcaccctcttccagc
acaggcaataaaaaatctgaaagtcatcaaggtgttcaagaagctgttcttatatgcctt
ccaactgataaacggactaacatgttggtcgtccaagatagtcaagataccagcacagaa
aatcagggcagagggaagcaggtaaagctggatgatcatagtgtaaaacaagtggacaaa
gaccaaaatgagcagaaaaatgaggatggtggtgccactcaaacaattttgcttaccaag
ctgccacctgtattaaccattcaactgaagagatctgcggctgatctttctaaattggtt
ggacatgtgagctttaatgagattcttcatgtaggaccattcatggacccaagttgtgag
gacaaagataactctagctatcgtctagttggtgtcattgagcacattggctccaccttg
cgtggagggcattacattgcttatgtgagggcggatcgcaatcagcagagtgggtcttcc
tcatgggtttgtgcgaatgattcctccatcagagaagtctctctacaagaagttctcagg
tgcgaggcctacattcttttctatgagaggatggaggaggaggacgactga
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