Brachypodium distachyon (stiff brome): 100833676
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Entry
100833676 CDS
T01717
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100833676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100833676
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100833676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
100833676
NCBI-ProteinID:
XP_014755189
UniProt:
A0A2K2DAP7
LinkDB
All DBs
Position
2:complement(25125793..25134700)
Genome browser
AA seq
1506 aa
AA seq
DB search
MLRRHKPPLTRRERESASGTHARLPCLCKPHLPPSAPPRRCETRSLFPRMDRSGRRGRAR
GRGETLAEASPRTRRRHAETIVIDLDSEDGGGGSSTAAAAASSSSSRRSSAPLTLVTSGS
VATRTRSRSLAMKSPVAEAEAAPRAKRRRKGTSAEADGGGGSKGAEASESASKGNRRGRS
RTASEPPDRALARKSKDADAEEEAEAEAEEEAEAEAPACGKRVEVSRVDGCANSERGEDP
LDDHNNGSNAREACGIGHGNEEHHNAAGKNRIGEPCGNGVASILNSSHGMNVVASGHAEG
VKDWGNKGGELDDGFEVDEEYMNEEDTEDDDEMLEEKLVGDLIRAYSNGDDLDADGVDWE
AEDEMEFDDDGDDDYFVHDADECGMSEPMCDDYKVGTQYLSDHEVVVGEVSCQLEEDVVK
DEVDPKREGTTCFDQGRLHIEILESDDEVKVLSDASNPLKRKPLPQAKIPVLPCVAWRTR
SLWGVKQDRISYNAYFEELSDEPIEDDDTEVELDDEDDNDDDSASFEEEEEEETKQEEVA
EKSKHKKGIHSSFPEIRSRPMPLFVNRERRMQTSIPKWRGTSKKARQPETCHVIYSSDDE
IIDDTAKDGLKCEVDEDPRNNVFQPLNFEKVGSDGTVGNGITTEQQKGSRFTWDLERRKK
LKLGIIKSRHSYERGLDLDSDSSGSGENERHGYQEGGDNKVGRKKKHLSSKSGKSGKKSS
RSTMLKRQSLLKLLMDKMTGDKDGECSPFDLHSQFEYNSNDSHPLVFSFGDEDHIPANKA
EQNAEHDMLWADYDFALELENIGTYYDDEHQEESNMLNLGLACTTPCSRGKHEFIIDDQI
GIRCKYCSLVNLEIRFVLPSMVSNYAEKSAWRNSSCLKDALMYHDLCEQAGSIDGQSQGF
HPYGTVWDLIPGAINTMYQHQREAFEFMWTNLVGDIRLDELKHGAKPDVVGGCVICHAPG
TGKTRLAIVFIQTYMKVFPDCRPVIIAPRGMLFAWEEEFKKWDVNVPFHILNTTEYSGKE
DRDICRLIKKEHRTDKLTRLVKLLSWNKGHGILGISYGLYMKLTSEKSVCTEENKVRSIL
LENPGLLVLDEGHTPRNERSVMWKTLGKVKTEKRIILSGTPFQNNFLELYNILCLVRPRF
GEMFLTKTKVGRRHYVSKKQRDKFSDKYEKGVWASLTSNVTDDNAEKVRSILKPFVHIHN
GTILRTLPGLRESVIVLKPPPLQKSIIRKVENIGSGNNFEHEYVISLASTHPSLVTAINM
SDEEASLIDKPMLERLRSNPYEGVKTRFVIEVVRLCEALKEKVLIFSQFIQPLELIKEHL
RKFFKWREGKEILQMDGKILPRYRQNSIEVFNNPDSDARVLLASTRACCEGISLTGASRV
VLLDVVWNPAVGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFSA
EDEFNNVRNMLSKAEMEHCSKLISQDKVLEEIASHDQLKGMFLKIHYPPTESNIVFTYNQ
ITPELS
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgctccgacgccataaacccccgctaaccaggagagagagagagagcgcatcaggtacc
cacgccaggttgccttgcctctgcaaaccccacctgcctccgtccgcccccccacgccgt
tgcgaaacgcgctctctcttcccccgcatggatcgctccggccgccgcggccgcgcccgc
ggccgtggagaaaccctagcggaggcctccccgcgcacgcgccgtcgccatgccgagacg
atcgtcatcgacctcgatagcgaggacggcgggggcggctcctcgacggcggcggctgct
gcgagcagcagcagcagccgtcgctcctcggcgcctttgacgctggtgacttcggggtcg
gtggcgacgcggacgcgatcgaggagcctggcgatgaagtcgccggtggcggaggcggag
gcggcgccgagggccaaaaggaggaggaaggggacgagcgccgaagcagacggcggcgga
gggagcaaaggcgccgaggcctcggagtcagcatcaaaaggaaatcgccgtggacgctcg
cggactgcctcagagccaccggatcgggctcttgcgcggaagagcaaggatgcagatgca
gaggaggaagcagaggctgaagcagaggaggaagcagaggcggaggcgcccgcttgtgga
aaacgggtggaggtatcacgggttgatggttgtgcgaacagtgagcgaggcgaggatcct
ttagatgaccataataacgggtctaacgctcgggaggcatgtggcattggtcacgggaac
gaggagcatcacaatgctgctggtaagaatcgaataggtgagccttgtgggaatggggtg
gccagtattttgaattcaagtcatgggatgaatgtggtggcatcaggccatgcagagggt
gtgaaagactgggggaataagggaggtgagctagatgatggttttgaggtcgatgaggag
tacatgaatgaagaggatacagaggacgatgatgagatgttggaggaaaagctcgtcggc
gatctgattcgtgcttacagtaatggtgatgatttggatgcagatggagtggactgggaa
gctgaggatgagatggagtttgatgatgatggcgacgacgactattttgtgcatgatgct
gatgaatgtggcatgtctgaaccaatgtgcgacgattataaggtgggaacacagtatctg
tcagatcacgaggttgtcgttggtgaagttagctgccaattggaggaagatgttgtcaag
gatgaggtggacccgaagagagaaggaactacatgctttgatcaagggagactgcatatt
gaaattctcgagtctgacgatgaagtcaaagtgctcagtgatgctagtaatcccttgaag
aggaagcctctaccacaagcaaagataccagttctgccatgtgttgcatggaggactcgg
tcattgtggggcgttaagcaagatagaatttcgtacaatgcatattttgaggagttgtct
gatgagccaatagaggatgatgatacagaagtggaactggatgacgaagatgacaacgat
gacgatagtgccagttttgaggaagaggaagaagaggagacgaaacaggaagaagttgct
gaaaagagcaaacacaagaaaggaattcactcatcctttcctgaaataaggtcaaggcct
atgcctcttttcgttaatagagagagaagaatgcaaacatcaataccaaaatggcgtggc
acctcaaagaaagcgaggcagccggaaacatgccatgtaatttactcatctgatgatgag
ataattgatgatactgcaaaagatggtttgaaatgcgaggttgatgaagatccaaggaat
aatgtttttcagccactcaattttgagaaagttggcagtgacggtacagtgggcaatggc
attactacagagcaacagaaggggtcacgatttacttgggatcttgagaggaggaaaaag
ctgaagcttgggataattaagagccgtcattcatatgagcggggtttggacttggattcg
gactcatcgggttctggtgagaatgaaaggcatggatatcaagaaggtggtgataacaaa
gttgggaggaaaaagaagcatttgtcatcaaaatctggaaaatctggcaagaaatccagc
cgttcaaccatgttaaagcggcagtctcttctgaagcttcttatggataagatgactggc
gataaagatggtgaatgttctccttttgaccttcattcccagttcgaatataattccaac
gattcccatccattagtattctcatttggtgatgaagatcatataccagctaacaaggca
gagcaaaatgctgaacatgatatgctatgggctgactatgactttgctttagagttggag
aatattggaacctattatgatgacgagcaccaagaagagagcaatatgctaaatcttggc
cttgcttgtacaacaccttgttctcgtgggaagcatgagtttattattgatgatcaaata
ggaatcagatgcaaatactgctccttggtaaatctagaaatcagatttgttttaccatca
atggtctcaaattatgcagagaaatctgcatggagaaattcatcttgtttgaaggatgcg
ttgatgtatcatgatctttgtgaacaagcagggagtattgacgggcaatctcaaggtttc
catccatatggaacagtgtgggacctcattcctggtgccattaatactatgtatcagcat
caacgtgaagcatttgaatttatgtggacaaatctagttggtgatattagacttgatgag
cttaagcatggagctaagcctgatgttgttggaggatgtgtgatttgtcatgccccaggg
acaggaaagacacgtttagctattgtgtttatccagacatatatgaaggtatttccagac
tgccggccagtgattattgcacctcgcgggatgctgtttgcttgggaagaggagttcaag
aaatgggatgtcaatgttcctttccatatactgaacactacagaatactcaggaaaagaa
gacagagacatatgtaggttaataaagaaagaacatcggacagacaagttgacaaggctt
gtaaaactgctttcatggaacaagggacatggtattcttggaataagttatggtctatat
atgaaactaacatccgaaaaatctgtctgcactgaggaaaacaaagtacgaagcattctt
ctcgagaaccctggtttgcttgtcctagatgaagggcacacacctaggaacgaacgcagt
gttatgtggaagacgttgggaaaagttaaaactgagaagcgcataattctatctggaact
cctttccaaaacaattttctcgagctttacaatatactatgtttggtgaggcccaggttt
ggtgaaatgtttttgactaaaacaaaagtgggcagaaggcattacgtgtcaaagaagcaa
cgtgataaattttctgataaatatgaaaaaggtgtttgggcttcattaactagcaatgta
actgatgataatgctgagaaagtgcgatcaatattgaaaccatttgttcatatccataat
ggaaccattcttcgaactcttccaggtctccgagagagtgtgattgttctgaaacctcct
ccccttcagaagagtatcattaggaaggtggaaaacattgggtctggtaacaattttgaa
catgaatatgttatttctttggcatccacacatccttctcttgtaactgccatcaacatg
tccgatgaggaagcttcacttattgataaacctatgcttgagagattaaggtcaaatccc
tatgaaggggtgaaaacaagatttgtaattgaagttgttcgtttgtgtgaagcactgaaa
gaaaaggtattgatctttagtcaatttattcagccattagaactgataaaagaacatctt
cggaagtttttcaaatggagagaagggaaagaaattctccaaatggatgggaagatcctt
ccaagatatcgacagaattcaattgaagttttcaataatccagatagtgatgcgagggtg
ttacttgcatctacaagagcatgttgtgaagggatcagcctaacaggagcttcaagagtt
gttctcttagatgttgtttggaacccagcagttgggaggcaagctattagcagggcattt
cggataggacagaaaaaatttgtgtatacatacaatttaataacttatggaacaggcgaa
ggtgacaaatatgacaggcaagcagaaaaagatcacttgtccaagttggtcttctctgca
gaagatgagttcaataatgtcaggaacatgctttcaaaagctgaaatggagcactgttct
aagttgatctcccaggataaggttctggaggagatagcttcccatgaccagctaaagggc
atgtttttaaagatacactatccaccaactgagtcaaatattgtttttacttacaaccag
attacccctgagttgagttaa
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integrated database retrieval system
