Brachypodium distachyon (stiff brome): 100835170
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Entry
100835170 CDS
T01717
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X2
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100835170
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bdi01001
]
100835170
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100835170
03036 Chromosome and associated proteins [BR:
bdi03036
]
100835170
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
100835170
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100835170
Protein kinases [BR:
bdi01001
]
Serine/threonine kinases: Other
TAF1 family
100835170
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100835170
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
100835170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
zf-CCHC_6
PNGase_A_C
Motif
Other DBs
NCBI-GeneID:
100835170
NCBI-ProteinID:
XP_003560349
LinkDB
All DBs
Position
1:complement(25977319..25992369)
Genome browser
AA seq
1830 aa
AA seq
DB search
MSDGERRDDDVPTTSAADDDDDEDYEEPGGGNHFLGFMFGNVDDSGDLDADYLDEDAKEH
LFALADKLGPSLKDIDLTKSSPAPVDPSEQDYDEKADDAVDYEDIDEEYDGPEVEAATEE
DHLLSKKDYFSSNTVFASVNTKASVFDEENYDEDEEPPNDEEPTNNNELPSDSKASVFDE
ENYDEDEEPPKKHSSVEQLDMSPSNGIPTTEMMSGSLSPRGESMDIEYEVCQDEVDTEED
QLESKSATSLPVLCIEDGSVILKFSEIFGIQEPVRKPKTDHHKRPVSKEIHITSDIVEDD
EEVFLRSTIQDLSYLKHIKMNEDVVESDSDDLISSDTFRLKDSCLSEQPMKDAYIDFPSA
QQSPVCPDFYPLEHEDWENGIIWGNSPANEGRHCLKSSIISEESGDTQEEEQAKDYGYVS
GCYDVQSKNNDSPLITEPFGCTEMPASASYHSPENSYPLLRKETPLEKNNLDEIEPNNIN
GTAKINTMKCLNNLSLLNKELLEGSWLDNIIWDPTEDTPKPKLIFDLKDDQMLFEILDEK
NGDHLRSHARAMIVSRPMKASAVEKFDHSNKAVTWSGQFNISNDNFYSNRKMSQQAKSHT
KKRSSMGIKVAHSVPAQKLQTMKPKLSNKEIVNFHRPKAKWYPHENKLAAKLQGDACSHG
SMTVIVMTLGGKGVKLVVNAEETPLSVKSKASKKLEFRPSEKIKLFGSGKELQDDISLAM
QNVRPKSILHVVRTEVHLWPKAQKLPGEDKPLRPPGAFRKRTDLSVKDGHVFLMEYCEER
PLLLANAGMGARLCTYYQKTSPTDQTATSLRSNSDGLGTVLAIEPADKSPFLGDIRSGSH
QSCLETNMYRAPTFPHKVASTDYLLVRSPKGMLSLRRIDKLYAVGQQEPHMEVFSPGTKN
MQNYLLNRILVYVYREFRVREMPGVPSQIRGDELPIQPPLTEAIVKKRLKHCADLKKLPS
GHTIWIQRPDFRIPSEEELRRLLTPEMVCCHESMQAGQHRLKRLGIEKLTQPVGLASAMN
QLPDEAIELAAAAHIERELQITSWNLTSNFVACTNQDRENIERLEITGVGDPSGRGLGFS
YVRVTPKAPVSNSSHKKKSAAAKGTTVTGTDADLRRLSMDAARELLLKFGVPDEQIDKLT
RWHRIAMVRKLSSEQAASGITIDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSL
SAIEGDDNGSDTEAHSDLDSFAGDLENLLDAEEFDDEDAGTADMRSDKADGMRGLKMRRC
PTQAQSNEEIQDDEAEAALVKKLLEDSGNDPKRKKQSVDLANYGTSMYNQGANKTKQGKA
GQMIKSSGYVSALLTPKEGTPRGGKEIEDSFTEGGLPSKLKTKQMVDANDIILVKKKNVL
GKDGFKEKRQGARGDSLVCGACGQLGHMRTNKLCPRYGEDPETLEMDALDVVSHVQAKTQ
GKRLVAKVSSEVPETEGPESIEKIKPVKFRCGAPEKFLERNMSVAGSLVSDKSIMDATDL
RSTGKVSKIKICSKVKSEDYPLDTPKPSVVIRPPAESEKDVPRKKVIIKQPKGHVDLQRA
LEISSSQEPKKIRKIAELSSFEKKNREDDHLYAGEPSQMNSSTDRLGLEGNRKNKEVLGG
DESWRAFKEQRERQEQRLIEARIYEANREEELQKAKKKSKKKKKHEFRDDDVLDHRPYRN
ERKVPERDRTAKRRTPADMTEFAPSAKRRRGGEVELSNILEKIVDLLRENTAISLLFLKP
VTKKVAPDYHDIILRPMDLGTIRDKARKMEYKNRDEFRHDVAQIAVNAHLYNDERHPHIP
PLADQLLEMCDYLLDESADVLDDAESAIEA
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatggggagcgccgcgatgacgatgttccgaccaccagcgccgcagatgacgat
gacgatgaggattatgaggagcctggtggagggaaccacttcctggggtttatgtttggc
aatgttgatgattctggtgacctagatgctgactatcttgatgaggatgcgaaggaacac
ctttttgcactggctgacaagcttggtccatctctgaaagatattgacttaaccaagtct
tctccagcaccagttgatccttctgagcaagactatgatgagaaagcagatgatgctgtt
gactatgaggacattgatgaagaatatgatggacctgaagttgaagcagctacagaagaa
gaccatttgctatccaagaaagattacttctcctcgaacacagtgtttgcttcagtcaat
actaaagcttcagtgtttgatgaggagaattatgacgaggatgaagagccacccaatgat
gaagaaccaaccaataataatgagttacctagtgatagtaaagcttcagtgtttgatgag
gagaattatgacgaggatgaagaaccaccaaagaagcactcttcagttgagcagctagac
atgtcaccctcaaatggtatccctaccactgaaatgatgtctggttcgttatcaccacga
ggggaaagtatggacattgaatatgaagtttgtcaggatgaagttgatactgaagaagat
cagctcgagtctaaatctgcaacttccctccccgttttatgcatagaggatgggagtgtc
atcttgaaattctctgaaatttttggcatacaggagcctgtaagaaaacccaagacagat
caccataagcgcccagtgagtaaagaaattcatatcacctctgacattgttgaagatgac
gaggaagtattcctgcggagtactattcaagatctctcgtatttgaagcatatcaagatg
aatgaagatgttgtcgagagtgacagtgatgacttaattagcagtgacacttttaggttg
aaagactcatgtctttctgaacaaccgatgaaggatgcatacatagatttcccttctgct
cagcaatctccagtttgtcctgatttttatccgcttgaacacgaagattgggaaaatggt
atcatttggggaaattcacctgcaaatgaaggccggcattgtttgaaaagcagcataata
tctgaagagagcggtgatactcaggaggaagagcaggctaaggattatggttatgtatct
gggtgctatgatgtacagagtaaaaataatgattctccactaataacagagccttttggc
tgtacagaaatgcctgcttcagctagttaccattcccctgagaacagttaccctctactg
agaaaggagactcccctggagaagaataacttagacgaaatagaaccaaataatataaat
ggaacagctaaaatcaatactatgaagtgtttgaacaacctctctctactgaacaaggaa
ttgctagaaggatcttggttggacaacataatttgggatcccactgaggatactccgaag
cctaagctaatctttgaccttaaagatgaccagatgctttttgagattctagatgaaaag
aatggggatcacctccgctctcatgctcgtgcgatgattgttagtcggccaatgaaggca
tcagcagtggaaaaatttgaccatagcaacaaagcagttacatggagcggccaattcaac
atttccaatgacaatttttattcaaacaggaagatgtcacagcaagctaaatctcatact
aaaaagcgttcttcaatgggcataaaggtggcgcattctgttcctgcacagaagctgcag
accatgaagccaaagttgagcaataaggaaattgtcaacttccatagaccaaaagctaaa
tggtacccccatgaaaataaacttgctgccaaattgcaaggagatgcttgtagtcatggg
tcaatgactgttatagtaatgactttgggaggaaaaggagtgaagcttgttgtcaatgca
gaggaaactcctctatctgtcaaatcaaaagcttccaagaagttagaattcagaccgtct
gaaaagatcaaattgttcggatctggaaaagaacttcaggatgatatctccttggctatg
caaaatgtgcgaccgaagtctattctgcatgttgttcgcactgaagtacatctatggcca
aaagcacagaagttgcctggcgaggacaagcctctacgtcctcctggggcattcaggaaa
agaactgacttgtccgttaaggatggacatgtatttttgatggaatactgtgaggagaga
cctctactacttgcaaatgcaggaatgggtgctcgactctgtacgtattatcagaaaact
tcacccactgatcagacagctacatccctgcgaagcaacagtgatggacttggtacagtg
cttgctattgagcctgctgacaaatctccctttcttggagatatacgttctgggtcccat
caatcatgtctcgaaacaaacatgtatagagcacctacatttcctcataaggtagcatct
accgattatcttttggttcgttcacccaaagggatgctttctcttcgtcgcattgacaag
ctatatgctgttggccaacaagaacctcatatggaagtattttcaccaggaacgaaaaat
atgcagaattatcttctgaatcgaattctcgtatatgtatatcgtgaattccgtgttagg
gagatgcctggtgttccttctcagattcgaggagatgaattacctatccagcctcctctg
accgaagctattgtgaaaaaacgattgaagcactgtgcagacttgaagaaattacccagt
ggacacacaatctggatacagagacctgattttcggattccatcggaggaagaactcagg
agactattgacaccagaaatggtctgctgtcatgagagtatgcaagctggtcagcatcgt
ctcaagcgcttaggaatcgaaaagcttactcagcctgtgggacttgcttctgcaatgaat
cagcttcctgatgaagcaattgagcttgctgctgcagcacatattgagagagagttgcaa
atcacaagctggaaccttaccagcaattttgttgcttgtactaatcaggacagagaaaat
atagaaagactagaaattactggagttggtgatccatctggccgtgggctaggatttagc
tatgtgcgagtaacaccaaaagcacctgtctccaattcatcgcataagaaaaagtcagct
gccgccaaaggtaccactgttactggaacagatgctgatctccgcaggttgagcatggat
gcggctcgagagttgcttctcaaatttggagtcccagacgagcaaattgataaattaaca
aggtggcatcggattgctatggtgaggaaactttcgagtgagcaagcagcgtcaggaatt
actattgatgaaattccagtcagtaagtttgcacgtggacaaaggatgtcttttctgcag
cttcaacagcaaaccaaagagaaatgtcaggaaatttgggacagacaaattcagtcactt
tcagctattgaaggggatgataatggcagtgatacagaagcccacagtgatctcgactca
tttgctggggatcttgagaacttgctagatgctgaagaatttgatgatgaagatgctggc
acagcagacatgagaagtgataaagcagatggaatgagagggcttaaaatgagaaggtgc
cctactcaagctcagtcaaatgaggaaattcaagatgacgaagcagaagctgctctagta
aaaaaattgcttgaagatagcggtaatgacccaaagaggaagaagcaatctgtggatctg
gcaaattatggtacctctatgtacaatcaaggtgccaacaaaacgaagcagggtaaggct
gggcaaatgattaaatcgtccggttacgtcagtgcattattgaccccaaaggagggcact
ccaagaggagggaaagagattgaagattcttttactgaaggtggcttaccctcaaaactg
aaaacgaagcagatggttgatgcaaatgatatcattctagttaaaaagaaaaatgttcta
gggaaggatgggtttaaggagaagaggcagggagcaaggggcgacagtctcgtatgcgga
gcttgtggccagcttggacacatgcggacaaacaaactgtgccccaggtatggggaggat
ccagaaaccttagaaatggatgctcttgatgtagtcagccatgttcaagcaaagacacag
ggcaagaggttggtggccaaggtttcatctgaagttcctgaaactgaaggcccagaaagc
attgaaaagatcaaaccagtaaaattcagatgcggggcaccagagaaattcttggagagg
aacatgtcagtggcaggttctttggtttctgataaaagcataatggatgctacagatttg
agatctactggaaaggttagcaagattaaaatatgtagtaaggttaaatctgaagattat
cctcttgacactcctaagccgtcagttgtaatacggcctcctgctgaatcagagaaggat
gtacctcgtaagaaggtcattatcaagcagcctaaggggcatgtagacctgcaaagagct
cttgaaattagtagtagtcaggaacccaaaaagataaggaaaattgctgaattgtcaagc
tttgaaaagaaaaacagagaggatgatcatttgtatgcgggagaacccagccagatgaat
tcctcaactgataggttgggtctggagggtaacaggaaaaacaaagaagtactgggaggt
gatgaatcctggagagcatttaaagagcaacgagagagacaagaacaaaggctaattgaa
gctaggatttatgaagcaaatagggaggaagaactccagaaggcaaagaagaaaagcaag
aaaaagaaaaaacatgaatttcgagatgatgatgttctcgatcacaggccatacagaaat
gaaagaaaggtacccgagagagatcgaacagcaaagagacgtactccagctgatatgaca
gaatttgcaccatcagctaagcggcgcagaggaggagaggttgagctctccaatatattg
gaaaagatagttgacctcctgcgggaaaacactgctatatcattactatttcttaaacca
gtgacaaagaaagtcgctcctgattaccatgacataatcctgcgcccaatggatcttggt
accatcagggacaaggcgaggaagatggaatacaaaaacagggatgagttcaggcatgat
gtggcccagatagcggtgaatgcacatctttacaatgatgaaagacatcctcacatccct
ccgctagctgaccagctcttggagatgtgcgattatcttctcgacgaaagtgcagatgtg
ctcgacgatgcagaaagcgcgatcgaggcctag
DBGET
integrated database retrieval system
