KEGG   Brachypodium distachyon (stiff brome): 100837688
Entry
100837688         CDS       T01717                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100837688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bdi03041]
    100837688
Spliceosome [BR:bdi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100837688
 Complex B
    100837688
 Complex C
   U2 SnRNP specific factors
    100837688
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 100837688
NCBI-ProteinID: XP_003570580
UniProt: I1IEX6
LinkDB
Position
3:complement(57469059..57477067)
AA seq 507 aa
MASTVLEATRAAHEDLERLERLAVRELQRDPANARDRLFQSHRVRHMIDLVVSTSEKLVE
IYDDKDSARKDEISTHLTAPVQDDIFNKFYDRLKEIRNYHRRNQSARFVSETDDYEELLK
EEPAIEFTGEEAFGRYLDLHELYNEFINSKFGSRMEYSAYVGTFAQTEKITHSLKATRQY
KEYLEHVLEYLTSFLYRTEPLQDLEKIFTKLESEFEEQWANGEVPGWENKGTEKETASQE
SAIDLDYYSTVEELVELGPEKLKEALAARGLKSGGTVQQRAERLFLLKHKALELLDRKHF
AKGSRSSVSNAPNGNNFKDDLKKEIALLEIKMRRLCEILDEVIVRTKENAEKKLTLTYEE
MEAEREEEEVQADSESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNH
SYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIDEAKALWDRIQSKQGLNKWRPD
LEEEYEDQDGNIYNKKTYTDLQRQGLI
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggcttcaactgtgctggaggccacgcgcgcggcgcatgaggacctggagaggctagag
cggctggctgtgcgcgagctgcagcgcgacccggccaatgcccgcgaccgcctcttccag
tcccaccgcgtccgccacatgatcgacctcgtcgtttccacctccgagaagctcgtggag
atctatgatgacaaggatagtgccaggaaggatgagatctccactcatcttactgccccg
gtgcaagatgacatcttcaacaagttttatgataggctcaaagagatccgtaactaccac
aggcgaaatcagtctgcccgttttgtcagtgaaactgatgattatgaagagctactaaag
gaggagccggctattgaattcactggcgaggaagcgtttggtcggtacctggacttacat
gaactctacaacgagttcataaattccaagtttggatcacgaatggaatactcagcatat
gttggtacttttgcccagacggaaaagatcacacatagtctgaaagctaccaggcagtac
aaagagtatttggagcatgttttggaatatctgacatcatttttgtatcgcacagagcca
ttgcaagacctcgagaagatttttacaaagttggaaagtgaatttgaagaacagtgggcc
aatggcgaagtgcctggctgggaaaataagggcacggagaaagaaaccgcgtcacaagag
tctgcgatagaccttgattactatagcactgttgaagaacttgtagagcttggtccagaa
aagttgaaagaggctttagctgctcgtggattgaagagtggtggaactgttcaacagcgt
gcggagcgacttttcttgctgaagcataaagccttggaactattggaccgtaagcatttt
gccaaaggttcgcgtagttctgtctcaaacgcacctaatggcaacaatttcaaggatgat
ttgaagaaagaaattgctttgctcgaaattaagatgaggcgcctatgtgagattctcgat
gaggtcattgtacggacaaaggaaaatgcagagaagaagttgacattgacatatgaagaa
atggaagcagaacgggaagaggaagaagtacaagctgatagtgaaagtgatgacgaagac
caacaaatctataaccctctcaagttaccaatgggttgggatgggaaacctatcccctat
tggctttataagcttcatggtcttggtcaggaattcaagtgcgagatatgtggcaaccat
agttactgggggcgaagggcttatgagcgccatttcaaggaatggcgccatcaacatggg
atgcggtgtcttggtattcctaatactaagaacttcaatgaaatcacatccatcgatgag
gcgaaagcactctgggatagaatacaatccaagcaagggctgaataagtggcggccagac
ttagaagaagagtatgaagatcaggatggtaacatttacaacaaaaagacctacactgac
ctgcagcgccaaggcctgatatag

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