Brachypodium distachyon (stiff brome): 100841064
Help
Entry
100841064 CDS
T01717
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100841064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100841064
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100841064
mRNA degradation factors
5'-3' decay
Decapping complex
100841064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
WH1
Motif
Other DBs
NCBI-GeneID:
100841064
NCBI-ProteinID:
XP_003557337
UniProt:
I1H2E6
LinkDB
All DBs
Position
1:complement(51865311..51870641)
Genome browser
AA seq
384 aa
AA seq
DB search
MAHGGGGRAKVTPNLAMDEEGTRMLNLTVLQRLDPAVEDILITAAHVTLYDFDTVLNQWS
RKDVEGSLFVIKRNAQPRFQFIVMNRRNTDNLVENLLGDFEYQLQVPYIMYRNAAQEVIG
IWFYNSQECEEVANLFSRILNAFSKVPLKPKIPSIKSEYEELEAAPALVEGPLEPPALDI
IAPTNHAREDPLSAFFNAAANVGGASGAVVMGHAPNESFGAAPLSSHAQTSITASQPPAL
HHLHPLQASSVSGIPHDVHDGTGVISRSTNLVNPSLFSPLMSSQAMACNNSAVPTVPHQH
HWNTQQPQSAPLLQPFPLPTASPSPPYGTPLLQPFPPPNPSPSLASAPDYSSLLSRDKIR
DALLRIVANEDFIDLVYREIVKGQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggctcatggcggtggcggaagggcgaaggtgacgccgaacctggcgatggatgaggag
ggaacgcggatgctcaacctcaccgtgctccagcgcctcgacccagccgtcgaggacatc
ctcataaccgccgcgcacgtcacgctttacgacttcgacaccgtcctcaaccagtggagc
cggaaggacgtggaaggctcgctctttgtcatcaagaggaatgctcagcccagatttcaa
tttattgtcatgaaccgtcgaaatacagataatcttgttgaaaatctcttgggtgatttc
gagtatcagcttcaagttccctatataatgtaccgcaatgctgcacaagaagttattgga
atttggttttataactctcaggaatgtgaagaagttgctaacctttttagcaggatactg
aatgcattctctaaggtccctctgaagccaaagattccctcgatcaaaagtgaatacgaa
gagctggaagcagcacctgctttggttgaaggtccactagaaccgccagctttggatatt
atagcccctactaaccatgcacgagaagatcccttgtctgcattcttcaatgctgctgca
aacgttggtggtgcatctggagcagtagttatgggacatgcgccaaatgaatcttttggg
gctgctccattatcttcacacgcgcaaacaagtattactgcatcgcagcctccagccttg
catcatttgcatcctttgcaagcttcctcggtttctgggataccccatgatgttcatgac
ggcactggtgttatatcgaggtccacgaatcttgtaaatccatcacttttttctccattg
atgtcttcgcaggcaatggcttgcaataattctgcagtgccaaccgtgccacatcaacat
cattggaacactcagcaaccacaaagtgctcccttgcttcagccttttccattgccaact
gcttcgccttcgccgccatatgggactccgttacttcagccatttccaccaccaaatcca
tccccatctcttgcatcagcaccagactacagctctctactgtccagagacaaaataagg
gatgcattactgagaattgtagcgaatgaagatttcattgatttagtctaccgggagatt
gtgaagggacaataa
DBGET
integrated database retrieval system
