Brachypodium distachyon (stiff brome): 100844435
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Entry
100844435 CDS
T01717
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100844435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100844435
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
100844435
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100844435
Prokaryotic type
100844435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
SR-25
Motif
Other DBs
NCBI-GeneID:
100844435
NCBI-ProteinID:
XP_003580805
UniProt:
I1J398
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All DBs
Position
5:complement(27220628..27225361)
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AA seq
310 aa
AA seq
DB search
MASSPPTAAKSIADFFVRPAKRLRSSSSTVPATTTPAASLSSSSSSAAASLSPEQRRRAD
TNLALARARRNLHLAKSKASGGEAKLEELLVEETWLEALPGELRKPYALELCRFVAQERL
HGKVPVYPPPHLVFHALHSTPFDNVKAVIIGQDPYHGPGQAMGLSFSVPEGIKIPSSLTN
IFKELHKDLGCTVPSHGNLERWAVQGVLMLNTVLTVREHQANSHAKKGWEQFTDAVIKTI
SQKKSGLVFLLWGNSAQAKIRLIDETKHHILKSAHPSGLSANRGFFGCRHFSQTNEILER
LGLSTIDWQV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcccctcccaccgccgccaaatccatcgccgacttcttcgtccgccccgcc
aagcgcctccgctccagctccagcaccgtccccgccaccacaacccccgccgcctccctc
tcctcctcctcctcctccgccgccgcctcgctctcgccggagcagcgccgtcgcgccgac
accaacctcgcgctcgcccgcgcccgccgcaaccttcacctcgccaagtccaaagcgtcc
gggggcgaggcgaagctggaggagctgctcgtggaggagacgtggctggaggcgctaccc
ggggagctgcgcaagccctacgcgctcgagctctgccgcttcgtcgcccaggagcggctg
cacggcaaggtccccgtctacccgccgccccacctggtgttccacgcgctccactctact
ccattcgacaacgtcaaagccgtcatcatcggccaggatccataccatggtcctggtcag
gccatgggtttgtctttctcagtaccagagggaatcaaaattccttccagcctaacaaac
atatttaaagagcttcataaggatctaggttgtaccgtgccctcacatgggaatttggaa
agatgggctgtgcagggtgttcttatgctcaacactgtgctaactgtgagggaacatcaa
gcaaattcgcatgccaagaaagggtgggagcagtttactgatgctgtcatcaagacaata
tcgcaaaagaaatcaggattagtctttcttctctggggaaactcagctcaagcgaagata
agattgattgatgaaacaaaacatcacattttaaaatctgcccatccatcaggcctgtct
gcaaacagaggtttcttcggatgcaggcacttctcacaaacgaatgagatcttggagagg
ctaggactatccactatcgattggcaggtctag
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