Brachypodium distachyon (stiff brome): 100846359
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Entry
100846359 CDS
T01717
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
100846359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100846359
Transcription factors [BR:
bdi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100846359
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
LigT_PEase
Motif
Other DBs
NCBI-GeneID:
100846359
NCBI-ProteinID:
XP_003560684
UniProt:
I1GY68
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Position
1:35014445..35017795
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AA seq
347 aa
AA seq
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MGDIALCGQLLLDNVVDGEFQLPSDAEDLFSILETWEDCVNGSAATTALSPTSGASSGAL
LAPPDSKLGSKRRMAPQDQEDNDDTAAQAQKRRKCSPEAPKTAHITVERNRRKQMNEHLA
ALRSLMPCFYVKRGDQASIIGGVVDYIKELQQVKQSLEAKKQRKAYTEQVLSPRPLPSPS
PRLPLSPLLKSTPPLSPRLATMSPCRTPPTPGSPYKLIRPLPLPPTMSSGSSAYVSPAMT
PTGCHEPSLEAIAAELSVYAANRQATLLPDVRVEFRGANLVLKTVSPRAPGQAVKIVAAL
EGRALEILHAKISTVDDTDVNAFTVKIGIECELSAEELVQEIQQTFS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgggagacatcgcgctgtgcggccagctcctcctggacaacgtcgtcgacggcgagttc
cagctcccctccgacgccgaagacctcttcagcatcctcgagacatgggaagactgcgtg
aacggtagcgccgctacgacggcgttgagccccacgtccggcgccagcagtggtgcgctg
ttggcgccaccagacagcaagctgggcagcaagcggcgaatggcgccgcaggatcaggaa
gataacgatgacacggcggcacaggcgcagaagaggcgaaagtgctcgccggaggccccg
aagacggcgcacatcacggtggagcgcaaccggaggaagcagatgaacgagcacctcgcc
gcgctgcggtcgctcatgccgtgcttctatgtcaagcgtggcgaccaagcatccatcata
ggaggggtggtggactacatcaaggagctgcagcaagtgaagcagtccctggaggccaag
aagcagcgcaaggcctacacggagcaggtcctcagcccacgcccgctgccatcgcccagc
ccgcggctccctctcagcccgctcctcaagtccacgccgccgctcagcccgcgtctcgcc
acgatgagcccctgcaggacgcccccgacgcccggaagcccctacaagctcatccggccc
ctgcccctgccaccaacaatgtcgtcaggctcctccgcctacgtgtccccggcgatgacg
ccgaccggctgccacgagccgtcgctggaggccatcgcggcggagctatcggtgtacgcg
gccaacaggcaggcgacgctcctccctgacgtgagggtggagtttcgcggcgccaacctt
gtgctcaagacggtgtcgccccgcgcgccggggcaggcggtgaagatcgtcgcggcgctg
gagggacgggcgctggagatcctccacgccaagatcagcacggtcgacgacaccgacgtc
aatgccttcaccgtcaagattggaatcgagtgtgagctcagcgcggaagaactggtacaa
gagattcagcaaacgttctcgtga
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