Brachypodium distachyon (stiff brome): 104581271
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Entry
104581271 CDS
T01717
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin 3
KO
K08770
ubiquitin C
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104581271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
104581271
Ubiquitin system [BR:
bdi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
104581271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
104581271
NCBI-ProteinID:
XP_024312649
LinkDB
All DBs
Position
1:complement(27851800..27895009)
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AA seq
735 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGLFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP
PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSD
TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQXMQI
FVKTLTGKTITLXVESSDTIDNVKSKIQDKEGLPPDQQRLIFAGKQLEDGRTLADYNIQK
XSTLHLVLRLRGGMQIFVKTLTGKTITLEVKSSDTIDNVKAKIQDKEGTPPDQQQLIFAG
KQLEDGRTLADYNIQKESTLHLVLRLRGGQXMQIFVKTLTGKTITIEFESSDTIDNVKAK
IQDKEGIPXELEDGRTLADYNIQKXSTLHLVLRLRGGMQIFVKTLTGXDTIDNVKAKIQD
KKGIPPDQQRLIFAGKQLEDGRTHADYNIQKEPTLHLVLRLRGGQICSVKCLTHGLFGLC
FGQTAKTMLLPITSVINDWEHTFAKSQCPESYKNSAIHLSLLHFSPAEIVTCDMVGRDFN
SFSSTLPCNKHSKQC
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcaccggcaagaccatcacccttgaggtcgagtcttct
gatacgatcgacaatgtcaaggcaaagatccaggacaaggagggcatccccccggaccag
cagcgtctcatcttcgccgggaagcagctggaggatggccgcaccctggcagattacaac
atccagaaggagtccaccctccatctggtgctcaggctcaggggtggcatgcaaatcttt
gtgaagacccttactggcaagaccatcacactcgaggtcgagtcgtctgacacgatcgac
aatgtgaaggcaaagatccaggacaaggagggcatccccccagaccagcagcgcctcatc
tttgctggcaagcaactggaagacggtcgcaccctggcagattacaatatccagaaggag
tccaccttgcaccttgtgcttcgcctccgtggtggcatgcaaatctttgtcaagaccttg
acaggcaagaccattactctggaggtcgagtcgtctgacacaatcgataatgtgaaggcg
aagatccaggacaaggagggaattccaccggaccagcagcgcctaatctttgctggcaaa
cagcttgaggatggcctctttgtcaagaccttgacagggaagacaatcacactggaggtc
gagtcgtctgacacaatcgataatgtgaaggcgaagatccaggacaaggagggcattcca
ccggaccagcagcgccttatcttcgccggcaagcagcttgaggatggccgcacccttgct
gattacaatatccagaaggaatccaccctgcacctggtgcttcgcctccgtggtggcatg
cagatctttgtcaagactttgaccgggaagaccattacactggaggttgaatcttcagac
accatcgacaacgtgaaggcgaagatccaggacaaggagggcatccccccagaccagcag
cgcctgatctttgctggtaagcagcttgaggatggacgcactctggcggattataacatc
cagaaggagtctaccctacacctggtgctccgcctccgtggtggccagtaaatgcagatc
tttgtgaagactctcaccggcaagaccattaccctctaggtcgagtcttccgacacgatc
gacaatgtcaagtcaaagatccaggacaaggagggcctccccccggaccagcagcgcctc
atcttcgctggcaagcagctggaggatgggcgcactctcgcggattacaacatccagaaa
tagtccaccctccaccttgttcttcgcctacgtggtggcatgcagatcttcgtcaagacc
ttgactggcaagaccattaccctagaggttaaatcttctgacacaatcgacaatgtgaag
gcgaagatccaggataaggagggcacacccccggaccagcagcagctcatctttgctggt
aagcagcttgaggatggccgcactcttgcggattataacatccagaaggaatccacactg
cacctggtcctccgtctccgtggtggccagtaaatgcagatctttgtgaaaaccctcact
ggcaagaccatcaccatcgagttcgagtcttcggacacgatcgacaatgtgaaggccaaa
atacaggacaaggagggcatccccncagagctggaggatggacgtaccttggctgattat
aacatccagaagtagtcgacccttcacctcgtactcaggctccgtggtggtatgcaaatc
tttgtgaagacgttgacaggcnaagacacgattgacaatgtcaaggcaaagatccaagac
aagaagggcattcccccagaccaacagcgcctaatctttgcaggtaagcagctcgaggat
ggccgcactcatgcggattacaacattcagaaggagcccaccttgcacctggtgctccgc
ctccgcggtggtcaaatttgctcggtcaaatgtttaacgcatggcttgtttggtttgtgt
tttgggcagacagccaaaaccatgctactaccaatcacttcagtgattaatgattgggag
catacatttgccaaatctcagtgcccggaatcttacaaaaattcggctattcatttgagc
ttattgcatttttcacccgcagaaatcgtcacttgtgacatggttgggcgagattttaat
tctttttctagcactttgccctgtaataaacattcaaaacaatgttag
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