Bdellovibrio sp. KM01: HW988_09120
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Entry
HW988_09120 CDS
T08445
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
bdk
Bdellovibrio sp. KM01
Pathway
bdk02024
Quorum sensing
bdk03060
Protein export
bdk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HW988_09120 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HW988_09120 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HW988_09120 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bdk02044
]
HW988_09120 (ffh)
Enzymes [BR:
bdk01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HW988_09120 (ffh)
Secretion system [BR:
bdk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HW988_09120 (ffh)
Eukaryotic Sec-SRP protein
HW988_09120 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
nSTAND3
AAA_22
6PF2K
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QLY27129
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All DBs
Position
1864359..1865690
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AA seq
443 aa
AA seq
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MFENLSDKIMASLKKVRGQNKITEANIEDVIKEIRLSFLEADVNFKVVKNFVDRVKTKAL
GADVLQNVNPGQQFVKIVHDELVQTLGGGAVDINVRENPSVIFMVGLQGAGKTTSSAKLA
LYIRQKLGKKPGLIPADIYRPAAIDQLQTLGKQNNIPTFPTPIGMKPEEILEKSKQWAKD
NMIDVVIVDTAGRLQVDDELMGELGRLKDIWAPQEILLVADAMLGQQSVNVAEGFHKRLN
LTGLVLTKVDGDARGGAALSIREVTGIPIKFLGVGEKVNALEVFHPDRLAGRILDMGDVL
SLVEKAAEVMDEKAARESAKKMMKNEFTLDDFLGQIQQLKKMGGFETILKFLPGMGEISK
QLKNMTPPDNEIKKIEAIIRSMTIQERNNHKILNASRRTRIANGSGTQVSDVNKLIKQFE
DAKKMMSGMMKMGMGRGGMKFPF
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacttatctgataaaattatggcgtcccttaaaaaggttcgtggtcaaaac
aagatcacggaagccaacatcgaagatgttatcaaagagatccgtttaagcttcctggaa
gctgacgtgaattttaaagtcgtaaaaaactttgttgatcgcgtaaaaaccaaagcactg
ggtgcggatgttcttcagaacgtaaacccaggtcagcaattcgtaaaaatcgtgcatgat
gaattggtgcaaaccttgggtggcggcgccgttgatatcaatgtgcgtgaaaacccaagt
gttattttcatggtgggtttgcaaggtgcgggtaaaaccacatcctctgcgaaattggct
ctttatatccgtcagaaattaggcaaaaagccaggtttgattccagcggatatctatcgt
cctgcggcgatcgatcagcttcaaacattgggtaaacaaaacaacatcccaacatttcca
actcccattggaatgaaaccagaagagattctggaaaaatccaaacaatgggcaaaagac
aatatgatcgacgtagttatcgtcgatactgccggtcgtttgcaggttgatgatgaatta
atgggtgagctaggtcgcctgaaagacatctgggctccacaagaaatcttgttggttgcg
gatgccatgctggggcagcagtccgtgaacgtcgcagagggcttccacaagcgtttaaat
ctgaccggtcttgttcttactaaagtagacggtgacgcccgtggtggtgctgccttgtca
attcgtgaggttactggcatccctattaaattcctgggggtgggcgagaaggtgaatgct
cttgaagtgtttcatccggatcgtctggcaggtcgtattctggatatgggtgacgttctt
tctttggtggaaaaagccgctgaggtgatggacgaaaaggcggctcgcgagtctgctaag
aagatgatgaagaatgaatttaccctggatgacttcctggggcagattcagcagcttaaa
aagatgggtggctttgagactatcttgaaatttttaccgggcatgggtgagatttcaaaa
cagcttaaaaatatgacccctccggataatgagattaaaaaaattgaggcgatcattcgt
tcgatgacgatccaagaacgtaataaccataagattcttaacgcttcgcgccgtacgcgt
attgctaacggttcggggactcaggtttctgacgtaaacaagctgattaagcagtttgag
gacgctaagaagatgatgagcgggatgatgaaaatgggcatgggtcgtggtgggatgaag
ttcccattttaa
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