Burkholderia dolosa: AK34_2806
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Entry
AK34_2806 CDS
T03793
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AK34_2806 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdl03021
]
AK34_2806 (rpoB)
03400 DNA repair and recombination proteins [BR:
bdl03400
]
AK34_2806 (rpoB)
Enzymes [BR:
bdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AK34_2806 (rpoB)
Transcription machinery [BR:
bdl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AK34_2806 (rpoB)
DNA repair and recombination proteins [BR:
bdl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AK34_2806 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
UbiD
BSH_YknX
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
AJY13178
LinkDB
All DBs
Position
1:complement(3006660..3010766)
Genome browser
AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRPIVHQVPFLLATQLESFSTFLQADVPATQRKPEGLQAAFTSV
FPIVSHNGFARLEFVSYALSAPAFNIKECQQRGLTYCSALRAKVRLVILDKESPNKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDE
GAQLEFVPERLRGEVARFDITDRDGKVIVQKDKRINAKHIRDLEAAKTKFISVPEDYLLG
RVLAKNVVDGETGEVIASANDEITESVLEKLREAGIKEIQTLYTNDLDQGPYISSTLRVD
ETTDKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEEAYDLSKVGRMKFNRRVGRDEI
TGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDGKVTDQIDYLSAIEEGRYMIAQANAAIDEDGRLIDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTCAVDSGT
TVQAFRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMG
DKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIR
LADDEAAAQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLQRQAKIEELRAFLTKIYNESGRAEDLDSFSDDEILELAKNLREGVPFAT
PVFDGATEDEMAKMLDLAFPDDIAKQLDMNPSKNQVRLYDGRTGEPFERRVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgcattcgcaagagtttcgcgaagcgccccatc
gttcaccaagttcctttcctgctggccacccagcttgaatcattcagcacgtttctgcaa
gccgatgtgccggcgacgcaacgcaagcctgaaggtttgcaggccgctttcacatcggta
tttcccattgtttcgcacaacggattcgcgcgcctcgagttcgtgagctatgcgttgtcc
gcgccggcattcaacatcaaggaatgccagcagcgcggcctgacgtactgctccgcgctg
cgcgcgaaggtccgcctcgtcatcctcgacaaggaatcgccgaacaagcccgtcgtcaag
gaagtgaaggagcaggaagtgtacatgggcgaaattccgctcatgacgccgaccggctcg
ttcgtcatcaacggcaccgagcgcgtgatcgtctcgcagctgcaccgttcgccgggcgtg
ttcttcgaacacgacaagggcaagacgcacagctcgggcaagctgctgttctcggcacgg
atcattccgtaccgcggctcgtggctcgacttcgaattcgatccgaaggacatcctgtac
ttccgcgtcgaccgtcgccgcaagatgccggtcacgatcctgctgaaggcgatcggcctc
acgccggaacagatcctcgcgaacttcttcgtgttcgacaacttcacgctgatggacgaa
ggcgcgcaactcgagttcgtgcccgagcgcctgcgcggtgaagtcgcgcgcttcgacatc
acggatcgcgacggcaaggtcatcgtccagaaggacaagcggatcaacgcgaagcacatc
cgcgacctcgaagccgcgaagaccaagttcatctcggtgccggaagactatctgctcggc
cgcgtgctggcgaagaacgtcgtcgacggcgagacgggcgaagtgatcgcgagcgcgaac
gacgagatcacggaaagcgtgctcgagaagctgcgcgaagcgggcatcaaggaaatccag
acgctctacacgaacgatctggatcagggtccgtacatctcgtcgacgctgcgtgtcgac
gaaacgaccgacaagacggccgcgcgcatcgcgatctaccggatgatgcgtccgggcgag
ccgccgaccgaagaagcggtcgaggcgctgttcaaccgtctgttctacagcgaagaagcg
tacgacctgtcgaaggtcggccgcatgaagttcaaccgccgcgtcggccgtgacgagatc
acgggcccgatgacgctgcaggacgacgacatcctcgcgacgatcaagatcctcgtcgag
ctgcgcaacggcaagggcgaagtggacgacatcgaccacctcggcaaccgtcgcgtgcgc
tgcgtcggcgaactggcggaaaaccagttccgcgcgggtctcgtgcgcgtcgagcgcgcg
gtcaaggaacgcctcggccaggccgaaagcgaaaacctgatgccgcacgatctgatcaac
tcgaagccgatttcgtcggcgatccgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgcgtttccgcgctgggc
ccgggcggtctgacgcgcgagcgcgcaggcttcgaagtgcgtgacgtgcacccgacgcac
tacggccgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggcctgatcaactcg
ctcgcactgtacgcgcacctgaacgagtacggcttcctcgagacgccgtaccgcaaggtc
gtcgacggcaaggtgaccgatcagatcgactacctgtcggcgatcgaggaaggccgctac
atgatcgcgcaggcgaacgccgcgatcgacgaggacggtcgactgatcgacgaactcgtg
tcgtcgcgtgaagccggcgaaacgatgatggtcacgccggaccggatccagtacatggac
gtcgcgccgtcgcagatcgtgtcggtcgcagcgtcgctgattccgttcctcgagcacgac
gacgcgaaccgcgcactgatgggttcgaacatgcagcgtcaggccgtgccgtgtctgcgt
ccggagaagccggtcgtcggtacgggcatcgagcgtacctgcgcggtcgactcgggcacg
acggttcaggcgttccgcggcggcgtcgtcgactatgtcgacgcaggccgtatcgtgatt
cgcgtgaacgacgacgaagcggttgccggtgaagtcggtgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatcgtgaagatgggc
gacaaggtgtcgcgcggcgacgtgctggcagacggcgcgtcgacggatctgggcgagctc
gcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaggat
tcgatcctgatctcggagaaggtcgtggccgacgatcgctacacgtcgatccacatcgaa
gagctgaacgtcgtcgctcgcgacacgaagctcgggccggaagaaatcacgcgcgacatc
tcgaacctggcggaagtccagctcggccgtctcgacgaatcgggcatcgtgtacatcggt
gcggaagtcgaagcgggcgacgtgctggtcggcaaggtcacgccgaagggcgagacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggcaccgtgatcgacgtgcaggtgttc
acgcgtgaaggcatccagcgcgacaagcgtgcccagcagatcatcgacgacgagctgaag
cgctaccgtctcgacctgaacgaccagctgcgcatcgtcgaaggcgacgcgttccagcgt
cttgcacggatgctcgtcggcaaggtcgcgaacggtggtccgaagaagctcgcgaagggc
acgaagatcgaccaggcttacctggaagatctcgaccactaccactggttcgacatccgc
ctcgcggacgacgaagcagcggcgcagctcgaagcgatcaagaactcgatcgaagagaag
cgtcaccagttcgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctcgcggtgaagcgccgtctgcag
cctggcgacaagatggcaggccgtcacggtaacaagggtgtcgtgtcgaagatcgtgccg
atcgaagacatgccgtacatggccgacggccgtccggcagacgtcgtgctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggttctggaagtgcacctcggctgggccgcg
aagggtctcggctggcgtatcggcgaaatgctgcagcgtcaggcgaagatcgaggaactg
cgtgcattcctgaccaagatctacaacgagtcgggtcgtgcggaagatctggacagcttc
tccgacgacgagatcctcgagctcgcgaagaacctgcgcgaaggcgtgccgttcgcgacg
ccggtgttcgacggtgcgaccgaggacgaaatggcgaagatgctcgacctcgcgttcccg
gacgacatcgcgaagcagctcgacatgaacccgtcgaagaaccaggttcgcctgtacgac
ggtcgcaccggcgagccgttcgagcgtcgcgtgacggtcggctacatgcactacctgaag
ctgcaccaccttgtcgacgacaagatgcacgcgcgttcgacgggcccgtactcgctcgtg
acgcagcagccgctgggtggtaaggcgcagttcggtggtcagcgtttcggtgaaatggaa
gtgtgggcactcgaagcgtacggcgcgtcctacgtgctgcaggaaatgctgacggtgaag
tcggacgacgtgaccggccggaccaaggtgtacgaaaacctggtcaagggcgatcacgtg
atcgatgcaggcatgccggagtccttcaacgtgctggtgaaggaaatccgttcgctcggt
atcgatatcgatctcgaccgcaattaa
DBGET
integrated database retrieval system
