Brevundimonas diminuta: EQG53_00535
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Entry
EQG53_00535 CDS
T05851
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bdm
Brevundimonas diminuta
Pathway
bdm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EQG53_00535 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdm03400
]
EQG53_00535 (uvrB)
DNA repair and recombination proteins [BR:
bdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EQG53_00535 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EQG53_00535 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
UB2H
eIF3_p135
DUF87
Motif
Other DBs
NCBI-ProteinID:
QAT12957
UniProt:
A0A410NSQ7
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All DBs
Position
111208..113529
Genome browser
AA seq
773 aa
AA seq
DB search
MFMARSPAKPTKPVHTPNPGMAEAPVAFDHGRAPMFAPVNGPRLTPEEAPAAPADWVPHR
PDRPTNKKRVPFRLETKYQPAGDQPSAIAELVAQADEGDREQVLLGVTGSGKTFTMAKVI
EQTQRPALILAHNKTLAAQLYSEFKAFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDS
SINEQIDRMRHAATRAILERDDVIVVASVSCIYGIGSVETYTAMTFNLKVGDQIDEAKLR
ADLIALQYKRNDVHFERGMFRKRGDTLEIFPVHLEDRAWRISLFGDEIEAIDEFDPLTGK
KTNALDEVTVYAASHYVTPRPTLNQAVNGIKAELKETLDWMVENGKLLEAQRLEQRTRFD
LEMMEATGSCAGIENYSRWLTGRAPGEPPPTFFEYIPDNALLFVDESHVTVGQIGAMFRG
DYRRKSTLAEYGFRLPSAIDNRPLKFEEWDAMRPQTVFVSATPGAWELDKTGGVFTEQVI
RPTGLIDPPVEIRPVSGSTRNQVDDVIDEVKATSRAGYRSLVTTLTKKMAEDLTEYMHEQ
GVRVRYMHSDVDTLERIEILRDLRLGSFDCLIGINLLREGLDIPECGLVAILDADKEGFL
RSETSLIQTIGRAARNVDGRVILYADRMTGSMERAIAETDRRREKQQAYNLEHGITPETV
KRDIKEILESPYESRDLDRLTRPGVAEEAKPFVGSNFQAALKDLEGRMRDAAANLEFEEA
ARLRDEIKKMKLLDLEFANEALTGAGEEVDKSAPKRWRKEAAAEKAEAFRKGR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggcccgttctcccgcgaaaccgaccaagcccgttcacacgcccaatcccggc
atggccgaggcgccggtcgccttcgaccacggccgcgcgccgatgttcgcgcccgtgaac
ggcccgcgcctgacgccggaggaggcgcccgccgcccccgccgactgggtgcctcaccgc
cccgaccggccgacgaacaagaagcgcgtccccttccggctggagacgaaataccagccc
gctggggatcagccctcggccatcgccgagcttgtggcccaggcggacgagggcgatcgc
gaacaggtgctgctgggcgtcaccggttcgggcaagaccttcaccatggccaaggtgatc
gaacagacccagcgcccggccctgatcctggcccacaacaagacgctggcggcccagctc
tattccgagttcaaggccttcttccccgacaatgcggtcgagtatttcgtcagctactac
gactactaccagcccgaggcctacgtcccgcgcaccgacacctacatcgagaaggacagc
tcgattaacgagcagatcgaccggatgcgccacgccgccacccgtgcgattctggagcgg
gacgacgtcatcgtcgtcgcctcggtcagctgcatctacggcatcggctcggtcgagacc
tataccgccatgaccttcaacctgaaggtcggggaccagatcgacgaggccaagctgcga
gccgacctgatcgccctgcagtacaagcgcaacgatgtccatttcgagcgcggcatgttc
cgcaagcgcggcgacacgctggagatcttccccgtccacctcgaggaccgcgcctggcgc
atcagcctgttcggcgacgagatcgaggccatcgacgagttcgatcccctgaccggcaag
aagaccaatgcgctggacgaggtcaccgtctacgccgccagccactacgtcaccccgcgc
ccgacgctgaatcaggccgtcaacggcatcaaggccgagctgaaggagacgctcgactgg
atggtcgagaacggcaagctgctggaggcccagcgcctcgaacaacgcacccgcttcgat
cttgagatgatggaggccaccggctcctgcgccggcatcgagaactacagccgctggctg
accggccgcgcgcccggcgagccgccgccgaccttcttcgaatacatccccgacaacgcc
ctgctgttcgtcgacgagagccacgtcaccgtcggccagatcggcgccatgttccgcggc
gactaccgccgcaagtcgaccttggccgaatacggcttccgcctcccctccgccatcgac
aaccgcccgctgaagttcgaggaatgggacgccatgcggccccagaccgtcttcgtctcg
gccacccccggcgcctgggagctggacaagaccggcggcgtcttcaccgaacaagtcatc
cgccccaccggcctgatcgaccccccggtcgagatccgccccgtctccggctccacccgc
aaccaggtcgacgacgtcatcgacgaggtgaaggcgaccagccgcgccggctaccgctcc
ctggtcaccaccctgaccaagaagatggccgaggacctgaccgaatacatgcacgaacag
ggagtgcgcgtccgctacatgcactccgacgtcgacacgctggagcggatcgagatcctg
cgcgacctgcgcctgggctcgttcgactgcctgatcggcatcaacctgctgcgcgagggc
ctcgacatccccgagtgcggcctggtcgccatcctcgacgcggacaaggagggcttcctg
cgctccgagacctccctgatccagactatcggccgcgccgcgcgcaacgtcgacggccgc
gtcatcctctacgccgaccgcatgaccggctcgatggagcgcgccatcgccgagaccgac
cgccgccgcgagaagcagcaggcctacaacctcgaacacggcatcacgcccgagacggtc
aagcgcgacatcaaggagatcctcgagagcccctatgagtcccgcgacctggaccgcctg
acccgccccggcgtcgccgaggaggccaagcccttcgtcggctccaacttccaggccgcc
ctcaaggatctggaaggccgcatgcgcgacgccgccgccaacctcgagttcgaggaagcc
gcccgcctgcgcgacgaaatcaagaagatgaagctcctcgacctcgaattcgccaacgaa
gcgctgacgggcgcgggggaagaggtcgacaagtcagcgccgaaacgttggcggaaagag
gcggcggccgaaaaggcggaggcgttcagaaaggggcggtaa
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