Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0301
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Entry
BBDE_0301 CDS
T04222
Name
(GenBank) cysteinyl-tRNA synthase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
bdn
Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BBDE_0301
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bdn01007
]
BBDE_0301
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdn03016
]
BBDE_0301
Enzymes [BR:
bdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
BBDE_0301
Amino acid related enzymes [BR:
bdn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
BBDE_0301
Transfer RNA biogenesis [BR:
bdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BBDE_0301
Prokaryotic type
BBDE_0301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
DALR_2
tRNA-synt_1
tRNA-synt_1f
DUF6052
tRNA-synt_1d
Motif
Other DBs
NCBI-ProteinID:
BAQ26295
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Position
complement(394288..395961)
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AA seq
557 aa
AA seq
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MSDSGNTLVGMTNTQEPQNTNTSGVAGTVQTVAGAATELKLYDTASHTVSSFVPLRPGQV
GIYVCGATVQSSPHIGHIRAAVAFDVVRRWFQRLGYKVTFVRNVTDIDDKILDKAAAAGQ
QWWERAYIYEREFTEAYDTLGVEPPTYEPRATGHMIDMIDLIRKIIDNGHGYVVTDENGN
PTGNVYFDVASWPHYGELTHQKQTAVSDDASKITDAMGPSVDNAGDDKYNPIDPADMSPD
KHDPRDFALWKAPKDSDPLDARWNTPFGTGRPGWHIECSAMSHRYLKDMFDIHGGGLDLR
FPHHENEMAQTRAAGYDSAARWMHSAWVTAKGEKMSKSLGNGLSVPAVLAENSAWVVRYA
LGSVQYRSMLEWSDQTLAEAQSAYDRVANFIERAGAAVGEQPSHDEIAAISADALPADFV
AAMNDDINVSGATAAIFTAIRSGNTLLSKLADRADSDAAKAEVREALVNVRAMLDTLGLD
PLAEPWVNGGVAGGAAGAAADSAEHAALDKLVSEQLAERAEARKSKDFARADAIRNALNA
AGIAIEDGPQGSTWSLQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctggcaatactctcgtgggtatgacgaacacgcaagaaccgcagaatacc
aacacttccggcgttgccggcacagtccaaacggtggctggcgccgcaaccgaactgaag
ctgtacgacaccgcctcgcacacggtgtcgagtttcgtgccgctcagacccggccaggtc
ggtatctacgtgtgtggcgccacggtgcagagctcaccgcatatcggccatatccgcgct
gccgtcgcattcgacgtggtacgtcgctggttccagcgtctcggctacaaggtcacattc
gtgcgcaacgtcaccgacatcgacgacaagattctcgacaaggcggccgccgcaggtcag
caatggtgggaacgtgcctacatctacgaacgcgagttcactgaagcatacgatacgctc
ggcgtcgagccgccgacctacgaacctcgcgccaccggccacatgatcgacatgatcgac
cttattcggaagatcatcgacaacggccacggttatgtggtgaccgacgagaacggcaat
ccgaccggcaacgtctacttcgacgtggccagctggccgcattatggcgaactgacgcat
cagaaacaaaccgccgtctccgatgatgcatccaagatcaccgacgcgatgggaccgtcc
gtcgacaatgccggcgacgacaaatacaacccgatcgacccggccgacatgtcgcccgac
aagcatgatccgcgcgatttcgcgttgtggaaggccccgaaggattccgatccgctcgac
gcccgttggaacacaccgttcggtacgggtcgtccgggctggcatatcgaatgctccgcg
atgagccatcgctatctgaaggacatgttcgacattcacggcggcggcctcgatctgcga
ttcccgcaccacgagaacgagatggcgcagacgcgcgccgccggttacgattcggccgcc
cgttggatgcattccgcttgggtcaccgcaaaaggcgaaaagatgagcaagtcgctcggc
aacggcctgtccgttccggcggttctggcggaaaattccgcctgggtggtgcgttacgca
cttggttccgtacagtaccgttccatgctggaatggtccgatcagacgctggccgaagcg
cagtccgcctacgatcgcgtggcgaatttcatcgaacgcgccggcgccgccgtcggcgaa
cagccgtcccatgatgagatcgccgcgatttccgcggatgcgctgccggccgatttcgtt
gccgcaatgaatgacgacatcaacgtttccggtgcgaccgctgcgattttcacggcgatc
cgttccggcaacacgttgctgtcgaaactggccgaccgcgccgattcggatgccgccaaa
gccgaagtgcgcgaagcactcgtgaatgtgcgtgcgatgctcgatacgttgggattggat
ccgctggccgaaccatgggtgaatggcggcgttgcaggaggcgcggctggcgctgccgcc
gattccgccgagcatgcggcgctcgacaagctcgtttccgaacagttggccgaacgtgcc
gaagcccgcaaatccaaggatttcgcccgagccgacgcgattcgcaacgcactgaacgcg
gcaggcatcgccatcgaagacggtccgcagggctccacttggtcgctgcagtag
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