Bdellovibrio sp. qaytius: CIK05_02115
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Entry
CIK05_02115 CDS
T05880
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIK05_02115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_02115
Enzymes [BR:
bdq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CIK05_02115
DNA repair and recombination proteins [BR:
bdq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIK05_02115
Prokaryotic type
CIK05_02115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
OB_SHLD2_2nd
Motif
Other DBs
NCBI-ProteinID:
AZZ35641
LinkDB
All DBs
Position
406532..407200
Genome browser
AA seq
222 aa
AA seq
DB search
MVNIKLSDSWQNQLKSEFQSDYMKNLNKFLQKEYESGKVIYPDAKKYFNALDLVDLKNVK
VVILGQDPYHGPGQAHGLSFSVPEGVRLPPSLQNIFKELKADLGKEIPKSGNLERWAKQG
VLLLNAVLTVEESKAAAHQKKGWEQFTDKIIEVVNNECEHVVFILWGAYAQKKGSIVDRS
KHLVLESVHPSPLSSHRGFFGSKPFSQANKWLKAKGIDPIDW
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacataaaactatctgatagctggcaaaatcaattaaaatccgagttccaatct
gactatatgaagaacctaaataagtttctgcaaaaagaatacgagagcggaaaagttatt
tatcctgatgcgaaaaaatattttaacgctttagatttagttgatttgaaaaatgtgaaa
gttgttatcctagggcaagatccttaccacggcccagggcaagcgcatggtttaagtttt
tctgttcctgaaggagtgcgtttaccaccttcgttacaaaatatttttaaagaattaaaa
gctgatttaggaaaagaaattccaaaatcaggtaatcttgaacgttgggctaaacaaggc
gtacttttattaaacgccgttttgactgtcgaagaaagtaaagcggccgctcaccaaaaa
aaagggtgggagcaattcaccgataaaattatcgaagttgtgaataatgaatgtgagcac
gtggtgtttattttatggggagcttacgcccagaaaaaaggttccatcgttgatcgtagc
aagcatctggtgcttgaaagcgttcatccatcgccattatcatcacatcgcggatttttt
ggctctaagcccttctcgcaagcgaataaatggttaaaggccaaaggcattgatccgatt
gactggtaa
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