Bdellovibrio sp. qaytius: CIK05_09940
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Entry
CIK05_09940 CDS
T05880
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bdq
Bdellovibrio sp. qaytius
Pathway
bdq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIK05_09940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdq03400
]
CIK05_09940
DNA repair and recombination proteins [BR:
bdq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIK05_09940
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CIK05_09940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
AAA_30
DUF87
IF2_N
Microtub_bd
AAA_22
SWI2_SNF2
COG5_N
Motif
Other DBs
NCBI-ProteinID:
AZZ37099
UniProt:
A0A3T0RSS5
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All DBs
Position
complement(2053416..2055527)
Genome browser
AA seq
703 aa
AA seq
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MSSTGKDKLNTKGTSAKKSPFKKNFKLVSPFQPAGDQPKAIETIVSNFKNGVKHQTLLGV
TGSGKTFTMAHTIAQLNQPALILAPNKTLAAQLYSEMKELFPENAVEYFVSYYDYYQPEA
YVPSSDTFIEKDSAINEQIDRMRHSATRSLFDRRDVIIVSSVSCIYGLGSPEAYEGMMVH
VVVEQKLKRDDLLRELIRIQYSRNNVDFSRGTIRVRGDIVEVFPPYEEERVVRIEFFGDF
VEKISWIDPLTGEVFEEMDQIGIYPGSHYATGDGSLKKAIVTIQEELGQRLNELKANIKF
LEAQRLEQRTYYDIEMMEQIGFCSGIENYSRHMTGRGPGEPPPTLIEYFPKEFITIIDES
HITVPQIGGMYRGDRARKTTLVEHGFRLPSALDNRPLNFQEFEKLMDKVVYVSATPAAYE
LEKSEGLIIEQIIRPTGLIDPPIEIRPVKTQIDDLLKEIRVRIAKNERVLITTLTKRSSE
DLTEYYESLGIKIKYLHSEIETLERTEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVGI
TDADKEGFLRSERSLIQTIGRAARNANGQVILYADRETDSMKKAIAETYRRRGIQDAYNK
EHGITPTTIKKRIKEGLGDLFDGSVSAYKLKGEKDKTAEKMAKFSTKPNKIQDEIKKLKD
KMKKLSAELEFEEAAKVRDEIKRLQILELQVRDAHLGQSGDDK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagtactggaaaagacaaattaaatactaaaggtacatcagccaagaaaagtcct
tttaaaaagaacttcaaattggtttctccgtttcaacccgcaggtgatcagccgaaagcg
attgaaacgatcgtttctaattttaaaaatggtgtaaaacaccaaacccttttaggggtt
accggttcgggtaagacttttaccatggcgcacacgattgcgcagttgaatcagccagct
ttaatcttggctccgaataaaaccttagctgcacagttgtattcagaaatgaaagaactt
tttcccgaaaatgcggtggagtactttgtctcgtattacgattactatcagcccgaggct
tatgtgccttcatcagacacctttattgaaaaagattcggccatcaatgaacagatcgat
cgtatgcgccacagtgccacgcgttcgctgtttgatcgtcgtgatgtgattattgtatcg
agtgtgtcgtgcatttacggtttaggttcgcccgaggcctatgaaggcatgatggttcat
gttgttgttgaacaaaaacttaaacgtgatgatttattgcgtgaattgattcgcattcag
tattcgcgcaataacgtggatttttcgcgcggaactattcgggttcgtggcgatatcgtt
gaagtttttcctccctatgaagaagaacgagttgttcgtattgaattcttcggagacttt
gtcgaaaaaatttcttggattgatcccttaactggcgaagtgtttgaagagatggatcaa
attggaatttatcccggatcgcattacgccacaggtgatggctcgttaaaaaaagcgatt
gtgaccattcaagaagagctcggacaaaggcttaatgaattaaaagcgaatattaaattt
ttagaagcccagcgcttagaacagcgtacctattacgatattgaaatgatggagcaaatt
ggtttttgttcgggtattgaaaattactcaagacatatgacagggcgcgggcctggcgag
ccgcctccaactttaattgaatattttccgaaagaattcatcactattattgatgagtcg
catatcacggttcctcaaatcgggggaatgtatcgtggtgacagagctcgtaagacgaca
ttagttgagcatggttttcgtttgccttcggctttagataatagaccgttaaactttcaa
gaatttgaaaagctgatggataaagtcgtgtatgtctcggcaacgcctgcagcttatgaa
ttagaaaaatctgaaggtctgatcattgaacaaattattcgtccgacaggattgattgat
ccgccgattgaaattcgtccggtgaaaactcaaattgatgatttgcttaaagagattcgt
gttcgtatcgccaaaaatgagcgcgtgttgattacgacattaactaaacgctcttcagaa
gatttaactgagtattatgaatctctgggtattaaaattaaatatttacatagcgagatt
gaaactttagagcgcactgaaattattcgtgatttacgtttaggcgtatttgatgtgctt
gtcggtatcaacttactgcgtgagggtttagatattccagaagtatcgcttgtgggaatc
accgatgcagataaagagggttttttacgttctgaaagatcactgattcaaacgattggc
cgcgcggctcgtaatgccaacgggcaagtgatcttgtatgcagatcgtgaaactgattcg
atgaaaaaagccatcgccgaaacctatcgtcgccgcggcattcaagatgcttacaacaaa
gagcatggtattacgccaaccacgattaagaaaagaatcaaagaaggcttgggcgatttg
tttgatggctcggtgagtgcgtacaaacttaaaggcgaaaaagataaaaccgctgaaaaa
atggcaaagttttcgactaagcccaataaaattcaagacgagattaaaaaattaaaagat
aaaatgaaaaaactttcagcagaacttgaatttgaagaagccgcaaaagtgcgtgacgaa
attaaacgtttacaaattttagagttgcaagtgcgtgatgctcatctaggtcagtcgggt
gatgataaataa
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