Bactrocera dorsalis (oriental fruit fly): 105233667
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Entry
105233667 CDS
T09719
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bdr
Bactrocera dorsalis (oriental fruit fly)
Pathway
bdr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105233667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdr03019
]
105233667
Messenger RNA biogenesis [BR:
bdr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105233667
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105233667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
CNOT1_1st
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
105233667
NCBI-ProteinID:
XP_049318010
UniProt:
A0ABM3K979
LinkDB
All DBs
Position
Unknown
AA seq
2470 aa
AA seq
DB search
MNQLKFTLAEIGILVKQLNKKNFAETSENINQYIKEIGLEADRHCLRCLFSVINFTDTIS
TSPNSNYNFIVEAQARLLGAQLENQLTRASFISNICFAVDHCFSQQKTLKPTPQLIAQIT
KLTGISKLCEVVLSIALTHSSQADLRQYSLEHLKVSFSELIESFLENKENSIAEKCNLQD
VSVEILQLLLVCINEVVSKELKSKFLDLLRKQFPLERVPLILSPHLYRKRLNCCDSPALL
PPEDTELIYNKQYADGGTVSQHLTEIGIEDIYDNLCKTIFTTQLNNNIMDTSWINLILEI
GYEFTSSVEECKNHLRCGSRELQSQDVAKIIGLMCRRHSSLLDCNVNLGTPANFWPGQPG
TGPNAQQQNVANNNDGSNVTSSGVDKTTNLNDKKDKVGGNPVGTISTETTQAWKPDVFVQ
ALKEVVPQLNWKEVCLELDHPEFILKDRIGLDLLLTIFRLGTQSALFPHPECIYRHWQNV
NGQLSLIAVMLKNPDLFTFSDYIFTAAPVEMLKTPPDTDNKEVCAWKSLHLVEVLLYIAD
QGFYHQVIELFKFPAQHCPDILFLSLLHINPPITALRQELFSQLIPTFLANHPNSGVILM
TAWSSQNFGGILRPIIMQSMSDWYQRGTEYDQVKLSRILDVAQDLKALSTLLNERSFLFV
IDLACLASRREYLKLEKWLSDKIREHGEPFIQAILKCLQRRCPQITNAKIPESQLPSKQA
QLPPETVTTMLQCLQGCIGNVPPEIVDLIMQMTANCSIMANKARAAVPPLVPQLQGVMRG
HRGMDMAGVPGVPPPPFSANLNAQQMFGPTMDTLSNLTTNIASLNLGGPNGAFNFGNVLG
NLASTPASPSRLMNPAASPYPLNAMQIPPPNIGNLGRMPQAAQQPTPTPPNPINPGMADL
QGPVSKEVEDEANSYFQRIYNHPPHPTLSIDEVLDILQRFKDSNIRREQEVYQCMLRNLF
EEYRFFPHYPEKELQITAQLFGGIIERNLVPSCVALGLALRCVLDALRKQDSKMYNFGIT
ALDRFKNRLHSYNKYCEYIRSIAHFNDFPPHLIQYVECGYLQQEPPPAKIQMLMAGSGQQ
PQPDSIYRSNSVTGNIVTTPTQQKPMVVAQSIHASRMKSIATATNIDTLLVANQEEKITI
PPEPVQDKTAFIFNNLSQLNIPQKCEEIKEIMTKEYWPWLAQYLVLKRASLEFNFHSLYF
NFLEALKNPEINKYVTKETLRNIKVLLRSDKGVVNFSDRSLLKNLGHWLGMMTLGRNKPI
LQIELDLKTLLAEAYHKGQQELLFVVPFVAKILESSGKSKVFKTPNPWTMAIMNVLGELH
QEPELKLNLKFEIEVLCKTLNLDLQKLKPIVYLKDPSRSMNIEHQMAQPKPKNVEAPPQQ
QQQQQQPSQGQTPGPGQMGPNDSDAQALLMGGGGSGGVSGANITGGVVPSPSISNESAGQ
VIMQAPEPRFSFVDINIANFHLIAQHVVLSPNITFLHANPGLKHIVLNAIERTITEWLQP
VVDRSVRIAVTTTEQIVRKDFGLDPDENRMRTAAHQMVRYLSAGMAMITCKDSLSQTLTN
NIRKAFLSALTGGPSYQDIEAAAIQLSNDNVELACAFIQKTAAEKSTPEVDRRMSTDFDT
RKMTRDEGGRFYDTQTLAYQTERMPEQVRLKVGGIPHTQFAVYAEFARNIPGFQQMTERD
IALFLPKPQELPPATFGNDEMGLLYAELAAKMDAFLNSTMNISTLQLQASKIHALLNALM
VTRRIRDNESALNLLTRVVEGLIEGLVNIPEHIEQMKLYRDIHLRILNMLQNTFGAGVTE
RAITKCIFDVREEVRYNVEAIKWLITSHFINVPQFDLLLREAMDNGNNYMAVTFAMTLME
RLLDGRTSATLETEMTGTFEMLGRLPQNRHRYPDATTHQIDMMDAGPFGGTDHYLAGSRQ
YMTSGMQHVRSNDCDDPPGLQEKTEFLLKDWVSIYNQSNNLSREAKIFTSFVQKMNMYGI
LKTDDLITRFFRQATQICIDLVYRILNDPSNSPLQARTKIFHWIDAFVHLIALLVRHSGE
SGNTTTKMNLLNKVLGIVLGILRQDQELHGTAFQQLGYHRFFVMLFLELSSPDAVLESLM
HSIITAFSHTYHLLNPEHAPGFGYAWLELISHRIFIGRILAQIPQQKGWPLYSQLLLDLF
RYLAPFLRNAELAKPVQTLYKGTLRVLLVLLHDFPEFLCDYHFGFCDAIPPNCIQMRNII
LAAFPRNMRLPDPFTPNLKVDMLAETATAPKICSNYVFNIQPANFKKDLDSYLKARAPVT
FLSELRSHLQISNEPGSRYNIPLMNALVLYVGTQAISHIRSKNFVPNTSNIAHSAHMDIF
QNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSEAIQEQITRVLLER
LIVNRPHPWGLLITFIELIKNPIYKFWDHDFVHCAPEISRLFESVARSCMVKSNHQPQIN
NMDGDIQEIN
NT seq
7413 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaactgaaattcacactagcggagattggtattttggtcaaacaactgaacaag
aaaaattttgctgaaaccagcgagaacataaatcagtatataaaagagatcggtttggaa
gcggaccgccattgtttgcgctgcctattctcggtgatcaattttactgacacgatatca
acaagtccgaattcgaattacaattttattgtagaagcacaagctagattactgggcgcc
caattggaaaatcaactgactagagcgtccttcatatcgaatatttgctttgctgtcgac
cattgcttttctcaacaaaagactcttaaaccgacaccacaacttatagcgcaaataact
aagttaacaggaattagtaaactttgtgaagttgtattgtcaatagcattaactcattcg
tcacaagcagatttacgccaatactctttggaacatctcaaagtatcattcagtgagctg
attgaatcattcttagaaaataaagaaaacagcattgctgagaagtgcaatttacaagac
gtatctgtagaaatattacaactgcttcttgtttgtataaacgaagttgtaagcaaagaa
cttaaaagtaaatttttggatttactacgcaaacaatttccccttgaacgagttcctctc
atactatcgccacatttatatcgtaaaagacttaattgttgtgattctccagcgttattg
ccaccagaagacactgaattgatttacaacaaacaatacgctgatggcggtaccgttagt
caacatttgacggaaattggtattgaagatatttatgacaacttatgcaagacaatattt
actacacagttgaataataatattatggacacatcctggattaatttaatcctagagatt
ggttacgaattcacctcaagcgttgaagaatgtaagaatcatctacgttgtggttcgcgc
gaacttcaatcacaggatgtggccaagatcattggtctcatgtgccgcaggcactcctca
ttactcgattgcaatgtgaacttaggaactccggccaatttttggccgggtcagccggga
actggccccaacgcacaacaacaaaatgtggccaataataatgacggcagtaacgttacg
agcagtggcgttgataaaacaaccaacttaaatgacaaaaaagacaaagtcggtggcaac
ccagtgggtaccatcagcacagaaaccacgcaagcatggaaaccggacgtgtttgtgcag
gcactgaaggaagtagtgccacagctgaattggaaagaggtttgcttagaacttgatcat
ccggaattcattttgaaggacagaatcggacttgatctgctgctgaccattttccgtttg
ggtacacaatctgctctattcccacatccagaatgtatatatcgtcattggcaaaacgta
aacggtcagctatcgctgatagcggttatgttaaaaaatcccgatctgtttacattctcc
gattacatcttcaccgccgcaccagtagagatgctaaaaacgccaccagataccgataac
aaagaagtgtgcgcttggaaatctctacacttagtggaagttttgctgtatattgcagac
caaggattctaccatcaagttattgaattgttcaaattcccagcacaacattgccccgat
atattgtttttgtcacttttacacataaatccaccaattactgcattacgtcaagaactt
tttagtcaactcataccgacttttctagcaaatcatccaaattcaggcgtaatacttatg
actgcttggagttcacaaaattttggtggaattttacgtcccattattatgcagtccatg
tcggattggtatcagcgcggcaccgaatatgatcaggttaagctttcgcgtatacttgat
gtagcacaggatttaaaagcactatcgacactgcttaatgaacgttcatttctatttgtg
atcgatttggcatgcctagcatcgcgacgcgaataccttaaactggaaaaatggctaagt
gataagatacgtgaacatggtgagcccttcattcaagctattttgaaatgcctacaacgt
cgttgcccacaaataacaaacgctaaaataccggaaagccaattgccatccaaacaggct
cagctaccacctgaaacagtgacaacaatgttgcaatgcctacaaggttgcattggcaat
gtaccaccagaaatagttgatcttattatgcaaatgacagcgaactgttcgatcatggcg
aacaaggcaagagccgccgtgccaccattagtgccacaactacaaggtgttatgcgtggg
catcgtggcatggatatggccggtgtaccgggcgtaccgccaccacctttctccgccaat
ttgaatgcacaacaaatgtttggacccacaatggatacgctatcgaatttaaccacaaat
atagccagcttaaatctcggtggacctaatggcgccttcaattttggaaacgtcttaggt
aatttggcgtctacaccagcttctccgtcgcgtcttatgaatccagctgccagtccatat
ccgctaaatgctatgcaaattccaccaccgaatattggaaatttaggtagaatgccgcaa
gcagcgcaacagccgacaccaacgccacctaaccccataaatccgggtatggctgatctg
caaggacccgtctccaaggaagttgaagatgaggctaattcatattttcaacgcatctat
aatcatccaccacatcccacactgtctattgatgaagtacttgatatattgcaaagattc
aaggattcgaatatacgtcgtgaacaggaagtttatcaatgtatgttgcgtaatctattc
gaagagtatcgctttttcccacactatccagagaaggagttacaaatcacagcacaatta
tttggtggcataatagagcgtaatttagtgccctcatgtgtggcattaggtttggccttg
cgctgtgttttggatgcattgcgcaaacaggactcgaaaatgtataattttggcataacg
gcattggatcgtttcaaaaatcgactacattcatacaacaaatactgtgaatacatacgt
tccattgcgcattttaatgactttccaccgcatttgattcaatatgtagaatgtggctat
ttgcaacaggaaccaccacctgccaagatacaaatgcttatggctggtagtggacaacag
ccgcaacccgattcaatttatcgcagcaattctgtgacaggaaatattgtaacaacacca
acacaacaaaagcctatggttgttgctcagtccatacatgcatcacgtatgaaatcaatt
gctaccgctactaatatcgatacactattggttgccaatcaagaggagaagatcactata
ccgcccgaaccagtacaggataaaaccgcattcatatttaacaatttaagtcaactgaat
ataccgcagaaatgcgaagagattaaggaaatcatgacgaaggaatattggccgtggcta
gcacagtatctggtgctgaagcgcgcttcattggaattcaactttcattcgttatatttc
aatttcttggaggcactgaagaatcccgaaatcaataaatatgtaaccaaggagacactc
cggaatataaaagttttactccgttccgataagggtgtggtgaatttctctgaccgcagt
ttgttaaagaatctgggtcattggttgggcatgatgacgttgggacgcaataagcctatt
ttacaaattgaattggacttgaaaaccctattggccgaggcatatcataaaggacaacag
gaattgctgtttgttgtgccatttgtagctaaaatattggaatcttcaggtaaatcgaag
gtcttcaaaacacccaatccatggacaatggctattatgaatgtacttggagaattgcat
caggagcctgaattgaaacttaatttgaaatttgaaattgaagtgctttgcaagacatta
aatctggatttgcagaaattaaagccgatcgtctatttgaaggacccctcacgttcgatg
aatattgaacatcaaatggcccagcctaaacccaaaaatgttgaggcaccgcctcagcag
caacagcaacaacaacaaccgtcacaaggtcaaactccaggtcccggacaaatgggtcca
aacgattcagacgcacaagccttactcatgggtggcggtggtagtggtggcgttagcggc
gcaaacataacaggcggtgtagtgccttcacccagcattagcaacgaatcagccggacag
gttataatgcaagcgcccgaaccgcgtttctctttcgtcgatataaatatagccaatttc
catctgatcgctcagcatgtggtactatcgccgaacataacatttttgcatgccaatcca
ggtctcaagcatattgtactcaatgcaattgaacgcacaattaccgaatggctgcaaccg
gtcgtagatcgcagtgtgcgtattgcagtgaccacaacagagcaaattgtgcgcaaagat
ttcggactcgatccagatgagaatcgcatgcgcacagctgcacatcaaatggtgcgttat
ttatcggctggcatggcgatgattacctgtaaagactccttgtcgcaaacattgacaaat
aacatacgcaaagcgttcttatctgcgctgactggcggaccaagttatcaggacatcgaa
gcggcggcaatacagcttagcaatgacaacgtcgagctcgcttgcgcttttatacaaaag
acagcggctgagaaatcaacacccgaagtagatcgtcgcatgtccaccgactttgataca
cgtaaaatgactagagatgagggcggtcgcttttatgacacacaaacattggcctatcaa
accgagcgcatgccggagcaagtacgtttgaaagtcggcggcataccacatacacaattc
gctgtgtacgccgagtttgcacgcaatattcccggcttccaacagatgaccgaacgcgat
atcgctctattcttgcccaaaccacaagagttgcccccggctaccttcggcaatgacgaa
atgggcctcctgtatgccgaattagctgccaaaatggatgcattcctcaacagcaccatg
aatatatccacactgcagttgcaggccagcaaaatacatgcgcttctgaatgcgctaatg
gtaactaggcgtatacgtgataatgaatcggctttaaatctactgacacgcgtcgttgag
ggtctcattgaaggattggtgaacatacccgaacacatcgagcaaatgaaattgtaccgt
gatatacatttacgtatactcaatatgttacagaatacttttggtgctggtgtaacagaa
cgagcaatcaccaaatgcattttcgatgtacgcgaagaggtgcgctacaatgttgaagct
atcaaatggcttataacctcacatttcataaatgtgccgcaattcgatttgttgttgcgc
gaagctatggataatggcaataattacatggctgtcacgtttgccatgacattaatggag
cggctgcttgatggacgcaccagcgccactttggaaacagaaatgactggcacattcgag
atgttgggtcgcttgccacagaatcggcatcgctatcctgacgccacgactcatcagatt
gatatgatggatgcgggaccatttggcggaactgatcactatttggccggttccagacaa
tacatgacctcgggcatgcagcatgtacggtccaatgattgcgatgatccacctggtttg
caagagaagaccgaattcctgctcaaagactgggtctccatctacaaccaatcgaacaat
ttgtcgcgtgaggccaagatcttcacatcatttgtacagaagatgaatatgtatggcatt
ctgaagaccgatgacttgataacacgctttttccgtcaggccacacaaatctgcattgat
ttggtgtatcgcatactgaacgacccaagcaattcaccattgcaagcgcgtaccaaaatc
ttccattggatcgacgcatttgtgcatttaattgctctgctggtacgccactccggcgaa
tcgggcaataccacgacaaaaatgaacctgctaaacaaggtgctcggcattgttctcggc
atattgcggcaggaccaagaattgcatggcaccgcattccaacagctcggctatcatcgc
ttctttgtgatgctattcctagagctgagctcacccgacgcagtactagagagtctgatg
cacagcattataactgccttctcgcacacgtatcatcttctcaatccagaacatgcaccc
ggtttcggctacgcctggttggagttgatctcacatcgcatttttatcggacgtatacta
gcacagataccgcaacagaagggctggccactgtactcacagctgctgctcgatttgttc
cgctatctggcgccattcttgcggaatgccgagctagcgaagcccgtacaaacattgtac
aagggaacgctgcgcgttctgctcgtgttattgcacgatttccctgaatttttatgtgac
tatcattttggtttttgtgatgcaataccgccaaattgcatacaaatgcgcaacataata
ttggctgcttttccacgcaacatgcgtttacccgatccgtttacgcctaatttgaaagtg
gatatgttggcggagactgcaacagcaccgaaaatttgctcaaattacgtattcaatata
cagccagcaaatttcaagaaagatctcgactcctacctgaaggcacgcgctccggtaact
ttcctctcggagctgcgctcacacttgcagatctcaaatgagcccggctcacgttacaac
attccgctcatgaatgcgctcgtactgtatgtgggtacgcaagctatttcgcacataaga
agtaaaaatttcgtgcccaatacatcgaacatcgcacacagcgcacacatggatatattc
cagaatttggctgtcgacttggataccgaaggacgctatctcttcctgaacgccattgcc
aatcaattgcgttatccgaatagccacacgcactacttcagctgcgcagtgctacatttg
ttcgccgaggccaactctgaggccatacaagagcagattacacgtgtgctacttgaacgt
ctcattgtgaatcggccacatccatggggtttgttgattaccttcatcgagctgatcaag
aatcccatctacaagttctgggatcatgactttgtgcactgtgcaccagagatttcaaga
ttattcgagtcggtggcacgttcgtgtatggtcaagtcgaatcatcagccgcaaatcaac
aatatggatggtgacattcaggaaatcaattaa
DBGET
integrated database retrieval system
