Borrelia duttonii: BDU_383
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Entry
BDU_383 CDS
T00768
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bdu
Borrelia duttonii
Pathway
bdu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bdu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BDU_383 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdu03021
]
BDU_383 (rpoB)
03400 DNA repair and recombination proteins [BR:
bdu03400
]
BDU_383 (rpoB)
Enzymes [BR:
bdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BDU_383 (rpoB)
Transcription machinery [BR:
bdu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BDU_383 (rpoB)
DNA repair and recombination proteins [BR:
bdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BDU_383 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ACH93335
UniProt:
B5RLU9
LinkDB
All DBs
Position
complement(414326..417793)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGKAEEILNLPNLIEIQLNSYEKFLQLERLKNNKPLLNEGLESVFRDVFPMK
SSNGEVALEYEKYYIEYDSISFTEKECKRKGQSYEAVLKIRLNLQFLTTGEIRQKDVYMG
TIPLMTDRGTFIVNGAERVIVSQIHRSPGVVFYKEKDLYYARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILVTLFLRALGLDTREKIIETFYKIRKIEVNDDTKREITGQYLATNITI
KENMTYRAGDKITLQDIEDFLQNGVKEINLIDFDGYDSVPGKHFISSDVILNCFEKEDAY
FALKDGFKELSRESVMLAVYSVLLPGEPISIDNAENDLRTVFFSEKRYDLGHVGRYKLSK
KFGLDDLTTSVLTMTDIVNTISHLLRIYDGHDVLDDIDHLGNRRVRSVGELLTNIYKGAM
SRVEKIAKDRMSNKEVFNLKPQELISVKPVVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSKVNDYGFLE
TPYRKVIDGKVTDDIEYLSAIDEEKKCIAQANASVSSDGNYTDDLVSVRISGDYTTMMPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPQPPIVGTGMERIV
AKDSGVVIKAKRPGRVVLATNKKIVIKPDNATSERDLDEYELYKYERTNQDTSFNHSVLV
KNGQIVNKDEIIADGPATRYGELALGNNLLVGFIPWNGFNYEDAILISERIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTADIPNVSGKILSKLDENGIVRIGTYVKPGDILIGKVTPKS
EGDITPEFKLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKDDVGNLPPGVDEILK
VYIAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLGEYYDVPVFESATNECIQEKLKKAGFNETSKAVLYDGYTGEPFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGIPTNVSGIPESFNVLMQELRGLGFDLSIYDDNGN
QIPLTEKEEELINKT
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagggttcatctaggacaaggaaaagccgaagaaatcttaaacttacctaac
ctaatagaaatacaattgaattcttatgaaaaatttttgcaacttgagagattaaaaaat
aataaacctttgctcaatgagggccttgaatctgtgtttagagatgtttttcctatgaaa
agtagcaatggtgaggttgctcttgaatatgaaaaatattatattgaatatgattctatt
agctttactgagaaagagtgtaaaagaaaggggcaaagttatgaggctgttttaaagata
agattaaacttacagtttctaacaacaggagagataagacaaaaagatgtttatatggga
actattcctttaatgacagatagaggaacttttatcgttaatggtgcagaaagagtcatt
gtatcacaaattcatagatctccgggggttgttttttataaggaaaaagatttatattat
gctcgtattattccttatcgtggttcttggcttgaatttgagattgactcaaaaaaagat
tacctttatgttaagatagacagaaaaaaaagaatattagttactcttttcttaagagct
ttaggtcttgatactagagaaaaaataatagagactttttataagattagaaaaattgaa
gtaaatgatgatactaaaagagagattacaggacagtatttagctacaaacattactata
aaagaaaatatgacttatcgggcaggtgataagataactttgcaagatattgaagacttt
ttgcaaaatggagttaaagaaataaacttgattgattttgatgggtatgatagtgttcct
ggaaaacatttcattagttccgatgttattttaaattgttttgaaaaagaagatgcttat
tttgctttaaaagatggatttaaagagctttcacgagaatccgtgatgcttgcagtttat
agtgtacttttgcctggtgaaccaatatcaattgacaatgctgagaacgatttaagaact
gtatttttttcagaaaaaagatatgatttaggtcatgtaggaagatataaactttctaag
aagtttggtcttgatgatcttacaacatcagttcttactatgacagatatagtaaatact
atatctcatcttttaagaatatatgatgggcatgatgttcttgatgatatagatcatctt
ggaaatagaagagtgcgttctgttggtgagttacttacaaatatatataagggtgcaatg
tcaagagtagaaaaaattgcaaaggacagaatgtctaataaagaagtatttaatttgaaa
cctcaagaattaattagtgttaagcccgttgtttctgctgttaaagaattttttgcaacc
agtcagctttctcagtttatggatcaggttaatcctttagccgaacttactcataagaga
cgtcttaatgcattgggtcctggtggactctcaagggatcgagcaggttttgaagtaaga
gatgtacattatactcattatggtaggatgtgtcctattgaaactcctgaaggcccaaat
attggacttattgtttctttggctacttattcaaaagttaatgattatggtttcttagaa
actccttataggaaggtgattgatggtaaggtgaccgatgatattgaatatttgtctgct
attgatgaggaaaaaaaatgtattgcgcaagcaaatgcttctgttagttctgatggtaat
tatactgatgatttggtgtctgttaggatttctggtgattatactacaatgatgcctaaa
aatatcgattacatggatgtttcgcctagacaattaatatctgtctcttcggcgttaata
ccttttcttgaacataatgatgcaaatcgtgctcttatgggttcgaatatgcaacgtcag
gcagttcctttattatttccacagccacctattgttggtacaggcatggagaggatagtt
gcaaaagactctggtgttgttattaaagcaaaaagacctggtagagttgtcttagccaca
aacaaaaagatagttattaaacctgataatgcaacttctgaacgagatttagatgaatat
gaactttataaatatgagaggacaaaccaggatacttctttcaatcattcagttttggtg
aagaatggccaaattgttaataaggatgagataatagcagatggtcctgctactagatat
ggagaattggcgcttggtaataatttattagttggttttattccgtggaatggatttaat
tatgaggatgctattttaatttctgagagaattgtaaaggaagatctttatacttcaatt
catattaaagaatttagcattgaagtaagagagactaagcttggacctgaaaaagttacg
gctgatattcctaatgttagtggaaagatattgagtaaacttgacgaaaatggaattgta
agaatagggacttatgtaaaaccaggtgatattttaattggtaaagttactccaaaatca
gaaggagatattacccctgaatttaaacttttaacttctatatttggtgagaaagcaaag
gatgttaagaataattcattaaaagttcctcatggtactgaaggaactgtaattgatgtt
caaagaattactaaagatgatgttggaaatcttccacctggtgtggatgaaatattaaag
gtttatattgccaaaaaaagaaaacttaaagaaggtgataaaatggcaggaagacatgga
aataagggtgtagttgcaaagattcttcctgttgaagatatgccatatcttgcagatggg
acccctcttgatatatgcttgaatcctttgggagtgccatctcgtatgaatattggacaa
ttgatggaatctcagcttggtcttgctggtaagtatcttggcgaatattatgatgttcct
gtttttgagtctgctacaaatgaatgtattcaagaaaagttaaaaaaagctggatttaat
gagacgtcaaaggcagtcttgtatgatggatatacaggtgaaccatttgaaaatgaagtt
atggttggagttatatatatgttgaaacttcatcatcttgttgatgataagatgcatgca
aggtctacaggcccttattcacttgtatctcaacaacctcttggaggaaaagctcaattt
ggtggacaaagacttggagagatggaagtttgggctcttgaagcttatggagctgcgcat
actttgcaagaattattaacagtaaagtcagatgatatgtcaggaagagttaagatatat
gaaaatattgttaagggcattcctactaacgtatctggaattcctgaatctttcaatgtt
ttgatgcaggaactaagaggtcttggttttgatttatctatttatgatgataatggaaat
caaattcctttaacagaaaaggaagaggaattaattaataagacttag
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