Borrelia duttonii: BDU_449
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Entry
BDU_449 CDS
T00768
Symbol
ntrA
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bdu
Borrelia duttonii
Pathway
bdu02020
Two-component system
bdu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BDU_449 (ntrA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BDU_449 (ntrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdu03021
]
BDU_449 (ntrA)
Transcription machinery [BR:
bdu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BDU_449 (ntrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_11
MarR
HTH_36
HTH_24
Sigma70_r4
CBM_3
HTH_IclR
HTH_27
Motif
Other DBs
NCBI-ProteinID:
ACH93394
UniProt:
B5RM08
LinkDB
All DBs
Position
complement(482927..484183)
Genome browser
AA seq
418 aa
AA seq
DB search
MLKQNLKLTHKLQLTQINTIKMLSLDKQELIQIISDELDNNEYIKVDSNKIFFESLKTYK
FKKFFYKENENNKTQYEIALAKTSPKISLKEHLLLQLRIQRLNEEEINIGEIIINNLNRK
GLYIINPYDFFNKEEWPQVTKMIKLIQQFDPIGICVPNIIESLILQAKYHNLDTNIIKIL
QKADLLTNTKEKLQKELNISTQDLNDAINTMKLKLNPNPTFEFKDKDDTNDYIEPDIIVI
NKGNKLKIKIKEVSIFKTEINKQEVKDLCKYKQAKWLIEALRYRDETLAKIGIAIYTLQK
EFLKRGFKRLRPMNLDDISTRINLSKSTISRAIKNKYLKFDWGTIAIRKLFNSIGGAKTN
EFSKLSIKIIIKGILAQNKNMVDSQISDILKSKGITISRRTVNKYRNELKCEGEIYGT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaaaacttaaaattaacacacaaattacaattaacacaaattaacacaatt
aaaatgttaagtcttgataagcaagaattaatacaaattatatcagacgaacttgacaat
aatgaatatattaaagtggattcaaataaaatcttttttgaatcactaaaaacctataag
tttaaaaaatttttttataaagaaaatgaaaataacaaaacacaatatgaaattgcactg
gctaaaacatcacctaaaatttcacttaaagaacatcttttattacaacttagaatccaa
agacttaatgaagaagaaattaatataggagaaatcataataaacaatctaaatcgaaaa
ggactatacataatcaatccttatgatttctttaataaagaagagtggccacaggtcact
aaaatgatcaaattgattcaacaatttgatccaataggaatttgcgtacccaatatcata
gaatcattaatattacaagcaaaataccataacttagatacaaatataattaaaattctt
caaaaagcagatttacttacaaatactaaagaaaaattacaaaaagaattaaacattagc
acacaagatttaaatgacgccattaacacaatgaaacttaaacttaatcccaatccaaca
tttgaatttaaagacaaagatgatactaatgactatattgaaccagatattattgttatc
aataaaggcaataaactcaaaatcaaaattaaagaagtcagtatttttaaaacagaaatt
aataaacaagaagttaaagacttgtgcaaatacaaacaagcaaaatggctcattgaagct
ttaagatatagagatgaaacactagctaaaataggaatagcaatatacacattacaaaaa
gaattcttaaaaagaggatttaagagattaagaccaatgaacttagatgatatatctaca
agaatcaatctatcaaaatcaactatatcaagagcaataaaaaataaatatttaaaattt
gactggggcacaatagcaattagaaaattatttaattcaataggtggtgctaaaacaaat
gaattttccaaattaagcattaaaataataataaaaggaatactagcacagaataaaaat
atggtagatagtcaaatttctgatatactaaaatctaaaggaatcactatttcaagaaga
actgtaaacaaatataggaatgaattaaaatgtgaaggagaaatttatggaacctaa
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