Theileria equi: BEWA_044040 Help Entry BEWA_044040       CDS       T02820                                  Name (RefSeq) hypothetical protein   KO K12604   CCR4-NOT transcription complex subunit 1 Organism beq  Theileria equi Pathway beq03018   RNA degradation Brite KEGG Orthology (KO) [BR:beq00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     BEWA_044040  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:beq03019]     BEWA_044040 Messenger RNA biogenesis [BR:beq03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      BEWA_044040   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      BEWA_044040 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CNOT1_CAF1_bind Not1 CNOT1_TTP_bind DUF3819 ARM_Cnot1 NOT1_connector Motif Other DBs NCBI-GeneID:  15807811 NCBI-ProteinID:  XP_004833815 UniProt:  L1LGW4 LinkDB All DBs Position 2 Genome browser AA seq 1682 aa AA seqDB search MDSSNSLHEGSDPLVGLVDFDNFQDYTNDEDIVNKYFYKLYVSQITTDQMIDVMRHLGNS PNGSRNKSVYNTMLKILFNECRFFPKYPVQELAITAELFGKMIKHGLLLSNGPLLLLASR CILEALKRGKTSKMFQFGTIALSQFENSIASYPWFSNALLGIPDVRETFPQLYRTCEKLQ TIITDGMRKNTYVDQARGIIIASTDDNTDLSQILENQSSHVAEPAPVPSARAPSIDDSTR QTVGEWENLMSDVGSTLTIVAPPEIAINQIYSIFNNICMDTVIQKSNEVNNILRPENFSW LILYIVRTRASKEHNLHEVFATFIDNLKYPKLFDTAIQVTYLCISACLRGLSDYKEILAY RTLLKNLGSWLGRITLARNVPIILRQLDIKALLFNAYENGALIAVLPFVCRAMESVKNSK IFKPPNPWTTAILTFLAEIHMVENLKTNLVFEVEVLFKQLSLDITHFSNKTNLLSNRVRP KVTPDFDTDSLVNPDEGIRTGSNDISKERLNQLLAKVMREGVVGTTKQQPDVPTSAGIPM QPGIMAPGGQPTHTLSDNHSDLYAESLLQTLHTSVVISPSIALFEIQPQLRGLVPIAIER AVRHVLTLVTDHSISLARMSTKVLIAKDFASEEDENVVRSATRLMFEHFASSLVSASCKE PLRMAFHESLRSALQTHRTQDCNDQVLVEQLVQIISQDNLALSVNVIEKVVAGHASRESE MVAADICKMLRTQPPQGIILPPLLQHWNYKNSQRDHHNLGVYRNIFTKPAKVASTTRQNS ACDGVMVLFEECLTELREPLRDIALFPPMLYASGPLEPGCESHLFSTHSLHVLYSLPANH ELFSYMAHCLSIVENSPYKESACIAIARCLLMFLSEGLGSHAGLNIEVLLCILDGLNHLS SGVKQALATLLFSIPLDQNNNLFNVVVVTGLLRYGLLDWTDLTQYLVLAMEKGKNTYAVE MAIVVTAIALIDQRSAPPECGAGLIREIASVSCGSEACKTYPGVLIKDAWAKLLKDYVEL QQQPRPTVISLTPILRMNLSDVFSVDGFKVPGFVGLGYGGVRRVPASCSISDSHKSVISA LFIRWVECSNPFDGEALLFAWRQFFQRFNLQNLFKMDGGTDSFFSACVHTAISMECMNYM DMEYNVDSLLQETSPEKATQEEPVSEAVNGSAVITDESSTKTQGEVDEKPDVVTTEKEQP VVEGDVITSTVELPTGEKSGFIALAKMADVMLRLVGGGDIPPSSALQKLLAALSSIIVHE NSHYACYKLWMVLLEYFDKVEENFQVLCKITFLHALELINPTRAPSFTYFWFRIISHASL IPGAIKHQKCWLSFSRIFSIASTFVNTMSSRYTFESFESFVERDYLESEFASQDRMAEAE EGGQELEIREGPVYKILKIYTRLVSYACAASPDFVASYHLSFSGSRAIEKMAASCQRGKS AATGSNSIFKQQKVAVDLLPEMKISPKVPCSLVAPVVRNGLKLLVERALRSIAKFGPSLL SQPSSDFGQILQLIETLVVENTNEAVLSLNALVLYLGVYSQAALGPNENSGSTEVFEGSA RLMLFLWLLKTLSPRAKYMFVFSIVRQLRQPNAHTHFFSCLLIWMFDECKSNSDEAIRSI ILRVLLEWFIAPGPCPWGVSLVVVELFRNPRFAPIFGNFNTTPRINDLFESLFSVFADVF AS NT seq 5049 nt NT seq  +upstreamnt  +downstreamnt atggattcctcaaattcgctacacgagggtagcgatccactggtaggtcttgtggacttt gataattttcaagactatacaaatgacgaagacatcgtgaataagtacttttacaaacta tacgtctcacagatcacaaccgatcaaatgatagatgtcatgcgacatctaggaaattcc ccaaatggatcacgtaataaaagtgtgtacaataccatgctaaagatcctgttcaatgaa tgccgcttcttcccgaaatatccggtgcaggagctggcgataactgcagaactctttgga aagatgataaaacatggattgctcttgtctaatggtccactgttgcttttggcatctcgc tgcattctagaggctctaaaacgtggtaaaacatccaaaatgtttcagtttggaactatc gcactctcccagtttgaaaattcgattgcctcatatccgtggttttctaatgcattactg ggaattccagatgttcgtgaaacatttccacaactctacaggacatgcgaaaaattacaa acaatcataactgacgggatgcggaaaaatacgtacgtagatcaggctaggggaattata attgcctcaactgatgataataccgatttatctcagattttggaaaatcaaagttctcac gttgcagaaccagctccggttccgagtgctcgtgctccatctatagatgatagcaccaga caaacagttggagaatgggaaaatttaatgagcgatgtaggatctaccctaacaattgtt gcgcctccagagattgccataaatcagatttactccatcttcaacaacatttgcatggac actgttattcaaaaatcaaatgaagttaacaatatacttcgtccagaaaacttctcatgg ttgatattgtacattgtaaggactcgtgcgtcaaaggaacacaacttacatgaggtattt gctacatttattgacaatttaaagtatccaaagctgtttgatactgcaatacaggtaact tacctatgtatatctgcttgtttgagaggtttatcggattataaagagattttagcatac agaacgttgctaaaaaatcttggaagttggctcggaaggataacgttagctaggaatgtt ccaatcatcctaagacaactagatataaaggctctgctatttaatgcctatgaaaatggt gccttgattgcagttttgccatttgtatgtagagctatggaaagtgttaagaactcaaag attttcaaacctccaaatccttggacaactgctatactcacatttttagcagaaatacac atggtagagaatctgaagactaaccttgtgtttgaggtagaagttttgtttaaacaactt tctcttgatatcacacacttttcaaacaagacaaacctattgagcaatcgcgtacgtccc aaggttactcccgattttgacactgatagtctcgttaatcctgatgagggtatacgtact ggttcaaacgatattagtaaagaacgtctcaaccaactactcgcaaaggttatgcgtgag ggggtagttggtacaacaaaacagcagccagatgttccaacttctgccggaatccctatg caaccggggattatggctccagggggacaaccaactcatactctcagcgacaaccattct gatttgtatgctgaatcacttttacagacacttcacacttcagtagtaatatctccatca attgctctctttgagatacaacctcagctgagaggattggtccctattgctatagaacgt gctgttcgtcatgtgttaactttagttacggatcactccatttcgttggctaggatgtca acaaaggtacttattgccaaagactttgcgtcagaggaagatgaaaacgttgttagaagt gctacccgtttaatgttcgagcattttgcatcatcactcgtatcggctagctgtaaggaa cctctgagaatggctttccatgaaagtttgaggagcgctttgcagacgcatcgtactcag gattgtaatgatcaagttttggtggaacaacttgttcagattataagtcaggataattta gcactttctgtaaacgtaatagaaaaggttgttgcggggcacgctagtagagaatctgaa atggtagcggcggacatttgtaagatgcttcgtacccaacctcctcaaggcataatactt ccacctctcttgcaacactggaattacaaaaattctcagcgtgatcatcacaacttgggg gtctacagaaatattttcaccaagcctgccaaggttgccagtactactcgtcaaaatagc gcttgtgatggtgtaatggttttgtttgaggaatgtttgactgaacttagggaaccgttg agagacattgccttgttcccaccaatgttatatgcatctggtccattggaacctggatgt gagtcacatttgttcagtactcactctctccacgtcttatacagcttgcctgcaaaccac gaactattttcgtacatggcccattgtttgagtattgttgagaactcaccatataaggaa tctgcatgtattgcgatagctaggtgcctgttaatgtttttgtctgagggtcttggttca catgcgggcctaaacattgaagtattgctttgtatattggatgggctaaaccacttatct tccggagtaaagcaagctcttgctacactattgttttcaattccattggatcaaaacaat aacctatttaacgtagttgttgtcactggacttttgagatatggtcttttagattggact gatttaacacaatatttagttttagcgatggaaaaggggaaaaatacttatgccgttgaa atggcgatagttgtcacagccattgctcttattgatcaaaggagtgctcctccagagtgt ggagctggtttgatacgtgaaattgcgagtgtatcttgtggatcggaagcttgcaaaacc taccctggtgtattaataaaagatgcatgggcgaagttgttgaaagactatgttgagctc cagcagcaacctagaccaactgtaatatcccttacaccaatacttcgcatgaatttatcg gatgtattttcagtcgatggattcaaggttccaggttttgtaggtttgggatatggaggt gtcagaagagtaccagcatcgtgctcgatttcagactcacacaaatcggttatatctgcg ttatttatacggtgggttgagtgttcgaacccgtttgacggagaagcccttttgtttgcc tggagacaattcttccaacgatttaatcttcagaatttgttcaagatggatgggggaaca gatagtttcttttcagcctgtgttcatactgcaatatcaatggaatgtatgaattatatg gatatggaatataacgtggattccctactccaagaaacttctcctgagaaggctacccaa gaggaacctgtctccgaagcagtgaatggatcggcagttattacagatgaaagctctaca aaaacacaaggcgaagttgacgaaaaacctgatgttgtgacaaccgaaaaggaacaaccc gtagtggagggtgatgttataacctcaaccgttgaattacccacaggtgaaaagagcgga ttcattgctctggcaaaaatggcggatgttatgctcagattggtcggaggtggtgatatt ccaccatcaagtgcccttcagaaacttttggcagccttatcaagtattatagttcacgaa aattctcactatgcctgctacaaattgtggatggttctattggaatattttgacaaggtt gaagaaaacttccaagtgctatgtaaaataacatttttgcatgcgctagaactcattaat ccaacgagggccccctcgttcacttacttttggttccgtataatttcccatgcctctctc attcctggagcaataaagcatcaaaagtgctggttgtcattctcgagaattttctcgatt gccagtacatttgtgaatacaatgtcttcaaggtacactttcgaatcgtttgaatctttt gtagaacgggattatttggaatctgagtttgcttctcaggacagaatggcagaagcagaa gagggtggacaggaactagaaattcgtgagggtcccgtatacaaaatattgaagatatac acaaggttggtttcatacgcatgtgcggcttctccggattttgttgcatcatatcatttg agctttagtggctccagggcaattgaaaaaatggcggcttcttgccaacgaggcaaaagt gctgcgacaggttcaaattctatcttcaagcaacagaaggtagcagtggatttgcttcca gaaatgaagatatctccaaaagttccttgctctcttgtggcgcctgtcgttaggaatggg ttaaaactcttggttgaacgtgctttgagatccattgccaaatttggtccgtcattactt tctcagccatcatccgattttggacagattctacagcttatagaaactctggttgtagaa aataccaatgaagccgttttgtcattgaacgcactcgtactttatctgggggtttattcg caggcagctcttggtcctaatgagaactcaggcagtaccgaggttttcgaaggtagtgca agactaatgctatttttgtggcttctcaagactctttctccgagagcaaagtacatgttt gtcttctcaatcgtgagacagctaaggcagccgaacgctcatacacactttttctcatgt ctcttgatatggatgtttgacgagtgcaaatcaaattcagatgaagccatccgatcgatt atattgcgagttcttttggaatggtttatcgcaccgggaccatgtccttggggtgtatct ctcgtcgttgttgaactctttaggaatcccaggtttgcaccaatatttggcaattttaac acaacacctcgaataaatgacctcttcgaatcgctcttttcagtattcgctgatgtcttt gcctcataa

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