Bacillus freudenreichii: NCTC4823_04227
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Entry
NCTC4823_04227 CDS
T06767
Symbol
gidA_2
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfd03016
]
NCTC4823_04227 (gidA_2)
03036 Chromosome and associated proteins [BR:
bfd03036
]
NCTC4823_04227 (gidA_2)
Transfer RNA biogenesis [BR:
bfd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NCTC4823_04227 (gidA_2)
Prokaryotic type
NCTC4823_04227 (gidA_2)
Chromosome and associated proteins [BR:
bfd03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NCTC4823_04227 (gidA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_binding_2
FAD_oxidored
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
Pyr_redox_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
VEF50053
LinkDB
All DBs
Position
1:4359825..4361708
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AA seq
627 aa
AA seq
DB search
MQQYEAGQYDIIVIGAGHAGCEAGLAAARMGAEVLMITINLDMVAFMPCNPSIGGPAKGV
VVREIDALGGEMGKNIDKTAIQIRMLNTGKGPAVQALRAQADKFQYQHEMKNTLENEPNL
TLHQGMVDELLVEDGVCTGVITMTGAIYRSKAVVITTGTFLRGEIILGELKYSSGPNNQQ
PSIKLSDHLRELGFDMERFKTGTPPRINSQTIDYSLTEIQPGDEEPRAFSYETTKMITDQ
LPCWLTYTNEHTHRLIDENLHRSPMFSGMIKGTGARYCPSIEDKVVRFSDKPRHQIFLEP
EGRHTNEVYVQGLSTSLPEEVQHELIKTVPALKNARMMRPGYAIEYDAIVPTQLWPTLET
KKIKNLYTAGQINGTSGYEEAAAQGLMAGINAARNIFGKEEVILSRSDAYIGVLIDDLVT
KGTNEPYRLLTSRAEYRLLLRQDNCDLRLTDLGHEIGLISQERYEKFTKKKADIEAEINR
LQKTILKPNEQTQAVIREAGGSELKDGIRASDLLKRPEMKYSHIAQLIPSEYELADDVID
QVEIQIKYEGYIEKSLQQVEKLKKLENKKIPEDIDYDAINGIATEARQKLNEVRPLSIAQ
ASRISGVNPADISILLVYIEHGKIARV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatatgaagcaggccaatatgacatcattgtgattggagcggggcatgccgga
tgtgaagcgggcctggcggccgccagaatgggagccgaagtgttgatgatcaccatcaat
cttgatatggtcgcttttatgccttgcaacccgtctatcggaggtccggcaaaaggggtt
gttgttcgagagattgacgcgctcggcggcgagatggggaaaaacatcgataaaaccgct
atacaaatcaggatgctgaataccggaaaaggacctgcagttcaggcattacgggcacag
gctgacaaattccagtatcagcatgaaatgaaaaacacacttgaaaatgaaccgaacctt
acactgcatcagggaatggtcgacgaactgcttgtggaagatggagtctgcacaggcgtt
attacaatgacaggtgcgatttaccgttcgaaagcggtggtcatcactacaggtacattc
ctgcgcggtgaaatcattttgggtgaactgaaatattcaagcggccctaacaatcagcag
ccatccatcaagctatcggatcatcttcgagagcttggttttgacatggagcggttcaaa
acaggaacgccgccgcggatcaacagccagacaatcgactacagtctcacggaaatccag
ccgggtgatgaagaacctagagcctttagttacgaaacaacgaaaatgataactgaccag
ctcccttgctggctaacatatacgaatgaacatacacacaggctgatagatgaaaacctg
caccgatctccgatgttttccggaatgatcaaaggaacgggtgcgcgctattgtccatcc
attgaagataaggtcgtccgttttagcgacaagccacgccatcagatttttctggagccg
gagggccgccatacaaatgaagtgtatgttcaaggactctcgaccagcttgccggaagaa
gttcagcatgaattgatcaaaacggttcccgctttgaaaaatgcacggatgatgagaccg
gggtatgcgattgaatatgatgcaatcgtaccgacccagctctggccgactctcgaaacg
aaaaaaatcaaaaatctttataccgcaggacaaatcaatggtacatccggatatgaagag
gcggccgcccaagggttgatggcgggcataaacgctgccagaaatatttttggaaaagaa
gaagttatcctgagccgctctgatgcttacatcggtgtccttatcgacgatcttgtcaca
aaaggcacgaatgagccgtatcgtctgttgacctcacgtgcagaatacaggctgcttctc
cgccaggacaattgcgatctgcgcttgacggatcttgggcacgaaatcggattaatttcc
caggaaagatatgaaaaattcacgaagaaaaaagccgatatcgaagcggaaatcaaccgt
ctgcaaaagacgatcttaaaaccgaatgaacaaacacaggcagttatccgtgaagcgggc
ggcagcgaattgaaagacgggattcgagcatccgatctgttgaagcgtccggaaatgaaa
tactctcatatcgctcaactgatcccttcagaatatgagctggccgacgatgtgatcgac
caagtggaaattcaaattaaatatgaaggctatattgaaaaatcgttgcagcaggttgaa
aagctgaaaaagcttgagaataaaaagattccggaagatatcgattacgatgccatcaac
ggaattgcgacggaagctcgtcaaaaactgaacgaagtgcgcccgctgtccattgcccag
gcatcccggatttcgggagtcaatccggcggacatatccatccttttggtatacattgag
catgggaaaattgcaagagtataa
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