Bacteroides faecis: K6V30_02405
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Entry
K6V30_02405 CDS
T07899
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bfe
Bacteroides faecis
Pathway
bfe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K6V30_02405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfe03021
]
K6V30_02405
03400 DNA repair and recombination proteins [BR:
bfe03400
]
K6V30_02405
Enzymes [BR:
bfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K6V30_02405
Transcription machinery [BR:
bfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K6V30_02405
DNA repair and recombination proteins [BR:
bfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K6V30_02405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UBE45738
LinkDB
All DBs
Position
complement(477593..478585)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVLMLEADSRFGKFEFRPLEPGFGITVGNALRRILLSSLEGFAITTIRID
GVEHEFSSVPGVKEDVTNIILNLKQVRFKQVVEEFESEKVSITVENSSEFKAGDIGKYLT
GFEVLNPELVICHLDSKATMQIDITINKGRGYVPADENREYCTDVNVIPIDSIYTPIRNV
KYAVENFRVEQKTDYEKLVLEISTDGSIHPKEALKEAAKILIYHFMLFSDEKITLESNDT
DGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKAANVETLGDLVQFNKTDLLKFRNFG
KKSLTELDDLLESLNLSFGTDISKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacctgataaagtattaatgttggaggcggactccaga
ttcggtaaattcgaatttcgtccgttggaaccggggtttggtattaccgtaggtaatgca
ttacgccgtatcctgctctcttcattagagggttttgctatcactactatcagaatagat
ggtgtggagcatgaattttctagtgtacctggagtaaaagaggatgttaccaacattatc
ttgaatctgaaacaagtgagattcaagcaagtagttgaagaattcgagagcgaaaaagtg
agtatcactgtcgagaattcaagtgaatttaaagcaggtgacataggtaagtatttgact
ggatttgaagtgttaaatccggaattagttatttgtcatttagattctaaggcaactatg
cagattgatattactattaacaagggtcgtggatatgttcctgctgatgaaaatcgcgaa
tattgcacggatgttaatgtaattccaatcgactctatttatacaccgatacgtaatgtc
aagtatgctgtagaaaacttccgtgtagaacagaagacagactacgaaaagctagtgctt
gagattagtaccgacggttctatacacccgaaggaagcgctgaaagaagctgcaaaaatt
ctgatttatcacttcatgttgttctctgacgagaagatcacgcttgaaagtaacgatact
gatggcaatgaagagtttgatgaagaagtattgcatatgcgtcagctgttgaagactaag
cttgttgatatggacttgtcagttcgcgccctcaattgtttgaaggctgctaacgtagaa
actctcggtgacttggtacaattcaacaaaactgacctgttgaagttcagaaacttcgga
aagaaatcgcttaccgagcttgatgatttgctggaaagtctgaatctatcgtttggaacc
gacatttctaaatataaattagataaagaataa
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