Borreliella finlandensis: QIA19_02440
Help
Entry
QIA19_02440 CDS
T09223
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bff
Borreliella finlandensis
Pathway
bff03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QIA19_02440 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bff03021
]
QIA19_02440 (rpoB)
03400 DNA repair and recombination proteins [BR:
bff03400
]
QIA19_02440 (rpoB)
Enzymes [BR:
bff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QIA19_02440 (rpoB)
Transcription machinery [BR:
bff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QIA19_02440 (rpoB)
DNA repair and recombination proteins [BR:
bff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QIA19_02440 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WKC89908
LinkDB
All DBs
Position
complement(400895..404362)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKSKKPLLNEGLESVFRNIFPIK
SGNGDVALEYERYYIENDVLNFTEKECKRKGQSYEAVLKVRLNLQFLTTGEIRQKDVYMG
TIPLMTERGTFIINGAERVVVSQIHRSPGVVFYKEKDLYSARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILITLFLRALGFDTREKIIETFYNIKKIKVEDGTKRDLPGQYLAKSINI
RENMYYRAGDKITLQDVEDFLQNGVNEIELVDFDGYDDISGKRFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYGSLFPGEPISIDNAENDLKTIFFSERRYDLGRVGRYKLSK
KFGFDDLTTSVLTMDDIVNTISHLLRIYEGHDILDDIDHLGNRRVRSVGELLTNIYKGAM
SRVEKIAKDIMSNKEVFNLKPQELISVKPIVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLE
TPYRKVVNGEVTDQLEYLSAIDEEKKCIAQANAAFNSNGKYLEDLVSVRISGDYTTTSPT
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPPIVGTGMESVV
AKDSGVVVKAKRSGEVILATSSKIIVKPFEAENAKDLDEYHIVKYERTNQDTCFNQSVLV
KEGQKVERGEIIADGPATRYGELALGNNLLLGVIPWNGFNYEDAILISDRIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTGDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKS
EGDITPEFRLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPIEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLGESYNVPVFESATNEQIQEKLKKAGFNPTSKEILYDGYTGEPFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDAGN
QVPLTEKEEELINKS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagagttcatctgggacaaggaagagctgatgagattttagacctacctaac
ctgatagaaatacaattaaattcttatgaaaaatttttacaacttgataaattaaaaagt
aaaaaacctttacttaatgagggccttgagtctgtttttagaaatatatttcccattaaa
agtggaaatggtgatgttgctcttgaatatgaaagatactatatagaaaatgatgtcctt
aattttacagaaaaagaatgtaaaagaaaggggcaaagttatgaggctgttttaaaagta
agactgaatttgcaatttttgactactggggaaataaggcaaaaagacgtatacatggga
actattcctttaatgacagaaagaggcacttttattattaatggggctgagagggttgtt
gtttctcagattcacagatccccaggagttgttttttataaagaaaaagatttgtattct
gctagaataattccttatcgtggttcttggttagaatttgagattgattcaaaaaaagat
tatctttatgtaaaaatagatagaaaaaaaagaatactcataactctttttttaagagct
ttggggtttgatacgagagaaaaaataatagaaactttttacaacattaaaaaaattaaa
gttgaagacggtacaaaaagagatcttccagggcaatatttagctaagagtattaacata
agagagaatatgtattatcgtgcaggagataaaattactctgcaagatgttgaagatttt
ttacaaaatggagtaaatgaaatagagcttgttgattttgatggttatgatgatatttct
ggaaagcgctttgtaagttcgaatgttattctaaattgtcttgaaaaagaggatgctttt
tttgctttaaaggatggctctaaagagcttccaaaagaatcagttatgctggctgtttat
ggctctctttttcctggtgagccaatatcaattgataatgctgaaaacgatttaaaaacc
atattcttttctgaaagaagatatgatcttggacgtgtggggcggtataaactttctaaa
aaatttggatttgatgatttaacaacatcggttttaactatggatgatattgttaacacc
atatctcatcttttaagaatatatgaaggccatgatattcttgatgatattgaccattta
ggaaatagaagggttcgttctgttggcgagcttcttactaatatatataaaggcgcgatg
tcaagagttgaaaaaattgctaaagatataatgtctaacaaagaagtttttaatctaaag
cctcaagaattaataagcgttaaacctattgtatctgctgttaaagaattttttgcaacc
agccagctttcacagtttatggatcaggtcaaccctttggctgagcttactcacaaaagg
cgtcttaatgctcttggcccaggaggactttcaagagatagggcaggatttgaagtaaga
gatgtgcattatacccattatggtagaatgtgtcctattgaaacccctgaagggcccaat
attggacttattgtttctttggctacttattctagagttaatgattatggttttttagaa
actccttataggaaagttgttaatggagaggtgactgaccagttagaatatttatctgct
attgacgaagagaaaaagtgtattgctcaggctaatgctgcttttaattctaatggaaag
tatcttgaagatttagtttctgttagaatttctggtgattatactacaacaagccctaca
aatatagactatatggacgtttctcctaggcagttaatttcagtgtcttcggcgttaatt
ccttttcttgagcataatgatgcaaatcgagctcttatgggttctaatatgcaaagacaa
gcagtacctttgcttttccctaagcctcctattgttggtacgggtatggaaagcgttgtt
gcaaaggattcaggagtagttgttaaggccaaaagaagtggggaagttattcttgcaaca
agtagtaagataattgttaaaccttttgaggcagagaatgctaaagatttagatgaatat
catattgttaagtatgaaaggacaaatcaagatacttgttttaatcaatccgttttagtt
aaagagggtcaaaaagttgaaaggggcgagataatagctgacggtcctgctactagatat
ggagaacttgctcttggtaataatttattgctaggagttattccttggaatggatttaat
tatgaggatgctatattaatttctgatagaattgtaaaggaagatctttatacatctatt
catatcaaagaatttagcatagaggtaagagaaactaaacttggtcctgagaaagttaca
ggagatatacctaatgttagcgaaaagatactaaataaattggatgaaaatgggattata
cggataggaacttatgtaaagcctggtgatattctggttggtaaagttactccaaagtca
gaaggagacattactcctgaatttagactgttaacttccatttttggagaaaaagcaaaa
gatgttaaaaataattcattaaaagttcctcatggtactgaaggtacagttattgatgtt
caaaggattaccaaagaggatgttggcaatctttctcctggagttgaggagatacttaaa
gtttatgttgccaaaaaaaggaagcttaaagagggcgacaaaatggctggaagacatggt
aataagggtgttgttgcaaagattcttcctattgaagatatgccttatcttgcagatgga
acccctcttgatatatgcttaaatcctttgggagttccatctagaatgaatattggacag
ttaatggaatctcaattgggtcttgctggtaaatatcttggtgaatcttataatgttcct
gtttttgaatctgctacaaatgaacaaattcaggaaaaattaaaaaaagctggatttaat
ccaacttctaaagaaattttatatgatggttatacaggagagccgttcgaaaatgaagta
atggttggggtgatttacatgcttaaactacaccaccttgttgatgataaaatgcacgca
agatcaacaggcccatattctcttgtttctcagcaacctcttggaggaaaagctcaattt
ggtgggcaaagacttggagaaatggaggtttgggctcttgaagcttatggtgcagcgcac
acccttcaagaacttttaacagttaaatctgatgatatgtcaggcagagtcaaaatatat
gaaaatatagtaaaaggtgttcctactaatgtatcagggatccccgagtcttttaatgtg
ctaatgcaagagcttagagggcttggacttgatttgtcaatttatgatgatgctgggaat
caggttcctttgacagaaaaagaagaagaattgattaataaaagctag
DBGET
integrated database retrieval system
