Bifidobacterium fermentum: QN062_08320
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Entry
QN062_08320 CDS
T10739
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bfk Bifidobacterium fermentum
Pathway
bfk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QN062_08320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfk03021
]
QN062_08320
03400 DNA repair and recombination proteins [BR:
bfk03400
]
QN062_08320
Enzymes [BR:
bfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QN062_08320
Transcription machinery [BR:
bfk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QN062_08320
DNA repair and recombination proteins [BR:
bfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QN062_08320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XDS50385
UniProt:
A0AB39UK23
LinkDB
All DBs
Position
2049949..2050944
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLNEEVVNAQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRVSGAL
HEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEAKAGDITSPAGVVISN
PDLHIANLADDGELEIEFTVERGRGYVPAQLNKQDNDEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEVGPAPVV
EETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVSHTEQDLLDIRNFGMKSIDEVKEK
LETMGLSLKASPLGFDTSNLEGGTFFSPEDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgtccgacactgaatgaagaagtagtcaatgctcagcgttctcgt
ttcaccatcgagccacttgagccaggattcggctatacgctgggtaattccctgcgccgt
acactcctgagctcgatccctggtgctgcggttacatcggtgagagtctctggtgccctg
catgagttcaccactctgccaggcgttgaagaggatgtcaccgaaatcctgctgaacatc
aagggcatcgttcttaccagtgaatacgacgagccagtcgttatgtatctacgcaagagc
ggcaagggcgaggcaaaggcgggagacatcacatccccagcgggcgttgtgatctcgaac
cctgatttgcatatagcgaaccttgcagatgatggggaacttgaaatcgagttcaccgtc
gagcgtgggcgtggatacgttccagcgcagttgaacaagcaggataacgatgagattggc
cgcatcccggttgattccatctattcgcctgtactcaaggtcacatacaaggtcgaggca
acccgcgtcgagcagcgtactgattttgaccgtttgatccttgatgtcgagacaaaaccg
gccatttcgccacgcgatgccgtcgcttctgcaggatcgacgctggttgagctcttcggt
ctctgccgcgagttgaacacgcaggcggagggtgtcgaagtcggtccagcacctgtggtt
gaggaaaccaacccagagatggcagttccgatcgaagacctgaatctgacgcagcgttcg
tacaactgcctcaagcgtgaaggcattcacaccattggtgagcttgtatcacataccgag
caggatttgctcgatattcgcaatttcggtatgaagtcaatcgacgaggtcaaagagaag
ctcgagaccatgggtctgtctctcaaggcatcgccgcttggttttgataccagcaatctt
gagggcggcacgttcttttcgccagaagacgagtaa
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