Branchiostoma floridae (Florida lancelet): 118404224
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Entry
118404224 CDS
T01074
Name
(RefSeq) acetylcholine receptor subunit alpha-1-A-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
bfo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
118404224
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118404224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118404224
Ion channels [BR:
bfo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
118404224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Kringle
Neur_chan_memb
Sushi
DUF2417
Motif
Other DBs
NCBI-GeneID:
118404224
NCBI-ProteinID:
XP_035659151
UniProt:
A0A9J7K6W3
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Position
2:complement(13247930..13257976)
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AA seq
592 aa
AA seq
DB search
MLLRLDVCVHVSDTKGVGRRCHCKECYYGNGENYRGTISATVSGEPCIGWGNRTYELQKY
PWANLEHNYCRNPDGAERPWCYAGEGGEWGYCDIQPCSGLVCKDRGIPRRVRPSPVKPHY
WPGEKVNYTCESGFILEGAVISECQRDATWDTAVPTCKVDERALLLEEKVALVKPSLPPT
GDVIITAEGLVSSIVNVDETIPAITTDSSFYLHWYDPRLAWTPSSYGDLQLIELDANKVW
RPTIQLLMNANPDYRGFPEVNVVVKADGEVLWILENLLVTTCNLDQYFFPFDNMTCPICV
GGKFRSGDEIRCREENSTEDVMNCSGTREVPGGEWSVSVSLEASGNQACLNLHLRRNPTY
HMCTTVTPFMVLSLLMCLTFFLPADGGARLGYAMTILLSMFVNLVVITDFLPRSGNIPFI
GIVNIVAIVMMSVFMLVTTWIVRLSQRETEMSQCTKVFFLGCCARLVLLGDMRRVPKEDK
DILLVNSRIVLDGDDIGITQDTGNSQGSPEADVATVLKGLKTVMRSTQQSLEALRQSLDG
WKKDGPSDDRDEGESDWERLALVLDRLCLIFYLGGLFASVPIILHFGYRRLL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttacttcgcctggatgtttgtgtccatgtgagtgacacgaagggagttggaagacgg
tgtcactgcaaggagtgttactatggtaacggtgagaactacaggggaaccataagcgcc
accgtgagcggcgaaccctgtattggctggggtaacagaacgtacgaactacagaaatat
ccatgggcgaatctcgagcacaactactgtcgtaacccggatggagcggagagaccgtgg
tgttacgcgggggaaggcggtgaatggggctactgcgacatccaaccttgtagtggtctt
gtttgcaaagatcgcggcatacctcggcgagttcgtcccagtccggtcaagccgcactac
tggccgggagaaaaggtgaactacacctgcgagtctggcttcattctggagggagccgtc
atttcagagtgccaaagagatgccacgtgggacaccgcagtaccaacttgtaaagttgat
gagagagcgctgcttctggaagagaaagtcgcgctggtcaagccctctcttcccccgaca
ggcgacgttatcattacggctgagggcctggtcagcagtattgtcaatgttgacgaaaca
ataccggccatcactacggactccagcttttacttgcattggtacgacccccggctcgcc
tggacgccgtcatcttatggtgacctgcagcttatagagctggacgcgaacaaagtatgg
agaccgaccatccagctgttaatgaacgccaatcctgactacagaggctttcccgaagtt
aacgtggtcgtcaaagctgacggagaggttctctggatcttagaaaatctgctcgtgacc
acctgtaatctcgatcaatacttcttcccgtttgacaacatgacgtgcccgatatgtgtc
ggaggaaagttccgatctggtgacgagattcgttgtcgagaagagaactctaccgaggat
gtgatgaactgcagcggtactcgggaggtgccaggaggagagtggagcgtatcggtcagt
ctggaggccagtgggaaccaggcctgtcttaacctgcacctccggagaaacccgacctat
cacatgtgcacgactgttaccccgttcatggtcctgtcgctgctgatgtgcctgacgttc
ttcctccctgcggacggtggggcacggctcgggtacgccatgaccatcctcctgtctatg
ttcgtcaacctcgtggtcatcacagacttcctaccgcgatctggaaatatcccattcatt
ggtatagtgaatattgtggccatcgtcatgatgagtgtcttcatgctggtgacgacttgg
atcgtaagactgtctcagcgagagactgaaatgtctcagtgtacaaaagtctttttcctg
ggatgctgcgcacgactggtactactcggtgacatgagaagggttccaaaagaggacaag
gacatcctgttggtcaacagcagaatcgttctcgatggggacgacatcggtattacccag
gacactggcaattcacagggcagtccagaagccgacgtcgctaccgtgttaaaaggcctg
aagacggtcatgagaagcacccagcagagtctagaggccctaaggcagagcttggatggc
tggaagaaagatgggccaagtgatgaccgtgatgaaggagagagcgactgggaacggctg
gcactcgttctggatagactgtgtttgatcttctacctcggtggtcttttcgcctctgtg
cctatcatcctgcattttgggtatagaagactgctgtaa
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