Branchiostoma floridae (Florida lancelet): 118406397
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Entry
118406397 CDS
T01074
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118406397
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118406397
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
GPHH
Motif
Other DBs
NCBI-GeneID:
118406397
NCBI-ProteinID:
XP_035662329
UniProt:
A0A9J7KGS6
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Position
19:1829390..1907326
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AA seq
1908 aa
AA seq
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MYVYTVGENISSEMERAYMFRPFTRETLLEIERRIVEEKQHDDALLSPPGSPAHGHSSAG
SPSHHSVADRDARPARDAPDSELEAGRSLPTSLGRFPRKLYGRPVEDVDPYYLNKKTFIV
VSKKGEIARFSATNGLWLLSPFCTIRGLALYILVHPWFSLLVMMAILVNCVFMTMTAPPE
MTEYVFTGVYSFEMIVKILARGFILEQFTYLRDAWNWLDFIVILLAYVTMFVDLGNLSAL
RAFRVLRALKTISVVPGLKTIVKALIESVKNLRDVILLTVFCLAVFSLLALQLYMGTLLN
KCVRHLPTDNGTASNVTDEIYMAHINNETNWYYYNGEWPLCGNASGAGQCPTGYTCLPGI
GTNPNHGYTSFDTFGYAMLSSFRLITQDYWENLYQLIIRAAGPWNMLFFVFIIFLGSCYL
INLMLAVVAMSYADANDNDDDDDSSSSSSSSSCSCSGSGSCHSGDCCCECVSVASDAERG
SNHSLDKTGSKRGSRFSIHNVILRSRSYELLNDSIVQSPTMDSMVRSPDTERTSLPDILS
NQSEMDMKVISNEQNVPNGMAPESCHNCKNWQDVRDFKGKTNTEIPWYYDTDDDEDVETK
EKLADKLKTWCCNTFWNSWECCSCFKRFQEILSLFVMDPLIDLLITLCIVLNTMFMAMDH
YGKSESFELTLKTGNYVFTAIFAAEFFLKLLALGPAVYFSSGWNCFDAIIVILSLAELGL
EGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIIGSSIGALGNLTFILGIVVYIFAVIGM
QLFGAEYEKRLDLFDGELPRWSFVDFLHSFLIIFRVLCGEWIENMWVCMLVNGWACIPLF
ILSMIIGNLVILNLFLALLLSCFSADSLADRPEGDGEPNNLQLAVEKLKRWAKMLLDLCR
PSFWRKRRKGKEKFNEANPTDGETSREAVEETVNEQVLDSVYTVNLPEEVPKTLPTVTPS
QFLLGSPTPAPLCRFGSNYDVTVVVPTRPMNGHAPIDGAALMKNVDSNQVPVFNHRLSEK
GADDLGICNEFGAAQSSQGAENGKPINCKSPNHQDNSEQKSGRPEGESTGTGNVNDDDDE
DADVIIDCCPPVCYPCCYKCCACANEERKAGEIWKNVRLKANFIVLHKYFETFIVGMILL
SSLALAFEDIYLKDRPALQLGLNIADRLFAVIFCCEMLIKWIAFGYRKYFTNAWCWLDFV
IVMISLLGIGAEALGLSNLSAFRSMRTLRALRPLRAISRAEGMRVVVNALVKAIPSIMNV
LMVCLVFWLIFAIMGVQLFGGQFFKCVDENNKRLPTNITDNKEECLMKNYTWINSKINFD
NVGQAYLVLFQVATFKGWIEIMADAVDVRGVGMQPDRETSLYFYLYFVVFIIFGSFFTLN
LFIGVIIDNFNAQKKCMIREGGESEDLFMTEDQKKYRKAMKKLGSKNAKKAIPRPTNCVQ
GWFYDTALNQKFDITIMVFICLNMVSMMIEHYRQSDKLKEALELINIIFIAVFTFEAVLK
IIGQRWYYFKQPWNIFDFVVVVMSLLGLILADFIAKYFVSPTLLRVVRVARIGRVLRLIR
GAKGIRTLLFALALSLPALLNIGLLLFLVMFIFAIFGMSNFAYVRKSNGLNDVINFETFG
NSMITLFQVSTSAGWNGILDPLINDGPPNCDPEADTPSSNGDCGNSGVAIFFVVVYLMVS
FLIVINMYIAIILDNFSQVRQEVEEGGVTEDDVEMFYAVWERYDPDATEYIQYERLSDFV
NELEPPLQIKKPNKITLAYLNIPIMQGERIYSKHLLKALTKFVLGTVGKEDDDDEEDVPG
PDEAHKMEEIPISSTLVKRREEVAARVFQRWYRKIMSERKQKEKHTDNRTPHELTEQTEI
EQAKSSPGERKRKQTSILPIILKPTLLDPTNLIRSPKLTIRGKKDTNS
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgtacacagttggtgaaaacatatcatccgaaatggagagagcttacatgttt
cgacccttcactcgggaaacactactggagatcgagcgtaggattgtagaggagaaacag
cacgacgatgctcttctctccccgcctggctccccggctcacgggcacagctcagcaggc
tcccccagccaccacagtgtcgccgaccgcgatgctcggccagcaagggacgcccctgac
tccgagttggaagcggggcgctctttgccaacttcacttggaagattccccaggaagttg
tatgggagacctgtcgaagatgtcgacccgtactaccttaacaagaagacgttcatcgtt
gtcagcaagaagggagaaattgcgaggtttagcgcgacaaatggactgtggctgctgtct
ccattctgcacaatccgggggctggcgctgtacatcctggtacatccgtggttcagcttg
ttggtgatgatggcgattctagtcaactgtgttttcatgacgatgaccgcccctccagag
atgacagaatacgtttttactggtgtttactctttcgagatgattgtaaagatattggca
agaggttttattctagagcaattcacatatctccgagacgcttggaactggctcgacttc
atagtcatacttttagcctatgttactatgtttgttgatctggggaacctttctgctctg
agagccttcagagtactcagggcactgaagactatttctgtagtgccaggtttgaaaacc
atagtgaaagctttgatagaatcagtaaagaatcttcgggacgttatcctgctgacagta
ttctgcctggctgtcttctcactcctcgccctgcaactctacatggggaccctactgaac
aagtgtgtgcgtcatctaccgacagacaacggaacagcatcaaatgttacagacgagata
tacatggcgcacataaacaacgaaacaaactggtactattacaacggagagtggcctcta
tgtggaaacgccagcggtgcaggacaatgccccactgggtacacgtgccttccaggaata
gggacgaacccaaaccatggctacacaagtttcgacactttcggctacgcgatgttatct
tccttccgccttatcacacaagactactgggagaacctttaccaattgataatccgagcg
gccggtccgtggaacatgctgttcttcgtcttcatcatcttcctggggtcctgttacctc
atcaacctgatgctggccgtggtggccatgtcatacgcggatgcgaacgacaatgacgat
gacgacgattcgtcctcctcctcatcgtcgtcgtcgtgttcctgttcggggagcgggtca
tgtcactctggagactgctgctgcgaatgtgtctccgtggcaagtgacgcagaacgtggt
tccaaccattccctggataaaacaggcagcaaacgcggcagcagattcagcattcacaac
gtaattttgcggagtagatcgtatgaattgttgaacgacagcattgtccagagccccacc
atggacagcatggttcggagtccagatacagagcggacgtctcttccagatatcctcagc
aaccaatcggaaatggacatgaaggttatttctaacgaacaaaacgttccaaatgggatg
gcgccagaatcatgccataactgtaagaattggcaagatgtcagagacttcaagggaaaa
acaaacacggaaataccatggtactatgatacggatgacgatgaagacgttgaaactaaa
gaaaagctggcggacaagttgaaaacctggtgttgcaataccttttggaacagttgggag
tgttgttcttgcttcaaacgatttcaagaaatcctgtccctttttgtcatggatccgttg
atagacctcttgatcacactatgcattgttctgaacacaatgtttatggctatggaccac
tacggcaaaagcgagtcttttgaactgacccttaaaacaggaaactacgtttttacggcc
atatttgcagctgaattttttctgaagttgcttgccctcgggcctgcagtgtacttcagc
agtggctggaactgtttcgatgccatcatcgttatcctcagtctggccgaacttggatta
gaaggcgtccaggggctgtcagttctcaggtcattcagattgctgagagtatttaagctt
gccaagtcctggccgacgttaaacctgctcatctccatcattggcagctccataggtgcc
ttgggcaatctgacgttcatcctcggcatagttgtctacattttcgctgtgatcggaatg
cagctttttggagctgagtatgagaagagattggatctttttgacggcgagttacccaga
tggagttttgtggactttttgcactccttcctcatcatcttcagagtgctgtgtggagag
tggattgaaaatatgtgggtgtgcatgctcgtcaacggatgggcctgcatccccctcttc
attctgtcaatgattataggcaatttggtgatcctgaacctattcttggctttgctgttg
agctgcttcagtgcagattctctagcagacagaccggaaggtgatggtgaaccaaacaat
ctgcaactggcagtagagaaactcaaacgatgggccaaaatgttacttgacttatgccgc
ccgagtttttggagaaaacgacgaaaaggaaaagaaaagttcaacgaagcgaatcctacg
gacggagaaacctccagggaagctgtagaagagacggtgaacgagcaagtcctcgattcc
gtttacaccgtcaatcttccagaggaggttccaaaaactttaccaacagtgacgccatcc
caattcctgttgggatcgcccaccccagcgccattgtgtagattcggttcgaactatgac
gtcacagtcgttgttcccacgcgccccatgaatggccatgcaccgatcgatggagctgcg
ctgatgaagaacgttgattcaaaccaagtgccagtatttaaccatagattatcagaaaag
ggtgcagatgaccttggcatttgtaatgaatttggagcagcgcagtcgtcccagggtgca
gaaaatgggaaaccgatcaactgcaaatcaccgaatcaccaagacaacagtgaacaaaag
agtggccggccagaaggagagagcactggtactggaaatgtcaatgatgacgatgatgaa
gatgctgatgttatcatcgattgctgtcctcctgtatgttatccatgctgctacaaatgt
tgtgcatgtgccaatgaggagagaaaggcaggggagatatggaagaatgtccggctaaaa
gcaaacttcatcgttcttcacaagtacttcgaaacgtttatcgttgggatgattttgctg
agcagtctggcactggctttcgaagacatatatcttaaagacagacccgccttgcagctt
ggcctgaacatcgcggatcgactgtttgccgtgatcttctgctgtgagatgctgataaag
tggattgcgtttgggtacagaaaatacttcaccaatgcctggtgttggcttgactttgtc
atcgttatgatttccctgcttggaataggggctgaggctcttggcctttctaatctgtcg
gcattcagatcgatgcgaacactgagggctttgcgaccgctgagagcaatttccagggcc
gagggcatgagggtagtggtgaatgcactggtgaaggccatcccgtctatcatgaacgtg
ctgatggtgtgccttgttttctggctcatctttgctatcatgggcgtccaactatttggt
ggacagttcttcaagtgtgtagatgaaaacaacaaacggctaccaaccaacattaccgat
aacaaagaagagtgcctgatgaaaaattacacttggattaactccaagatcaacttcgac
aacgtgggtcaagcttatctggtattgtttcaagtggcgacgttcaaaggatggatagag
atcatggccgatgctgtggacgtcagaggggtcggaatgcagccagacagagagaccagc
ctgtacttctacttgtacttcgttgtcttcatcatctttggctccttcttcactcttaat
ctcttcatcggtgtcattatcgacaatttcaacgcccagaagaagtgcatgataagggaa
ggaggggagtcagaggacctttttatgacggaggaccagaagaaatatagaaaggctatg
aagaagcttggatcgaaaaacgcaaagaaagcgataccaagaccaacgaactgtgtccag
ggctggttctacgacacagcgttgaaccagaagtttgatattaccatcatggtcttcatc
tgcctgaacatggtttctatgatgattgagcactacagacagagcgacaagcttaaagag
gcgctggaactcatcaacatcatcttcatcgctgtcttcaccttcgaagctgtgttgaag
atcatagggcagcggtggtactatttcaagcaaccctggaatatctttgacttcgtcgtg
gtagtgatgtcgttattaggacttatactcgctgacttcatcgcaaagtatttcgtctca
ccaacattgttgcgggtggtgagagttgctagaattggacgggtcctcaggctcattcgt
ggagcaaagggaatacggacccttctatttgcattagctttatccctaccagctcttctt
aacataggattgctgttgttcctcgtcatgtttatatttgccatatttggcatgtcaaac
tttgcttatgtgagaaaaagtaatggtctaaatgatgttatcaattttgagacattcgga
aacagcatgataactctcttccaagtatctacttcagccggttggaacgggatattggac
ccacttataaacgatggtcccccgaactgtgatccggaggcggacaccccatcctcgaac
ggagactgtgggaattccggagtggctatattttttgtggtggtgtaccttatggtcagc
tttctaatcgtgataaacatgtacattgccattattctggacaacttcagtcaggtccgc
caagaggttgaggagggaggagtaacggaggacgacgtggagatgttctatgccgtgtgg
gaacgttacgacccagacgccaccgaatatatacaatacgaacgtctctcagacttcgtt
aacgagttggagccacctcttcaaatcaagaaaccaaacaaaataacattagcatatctg
aatatccctataatgcaaggggaacgaatatacagcaagcatctgttaaaagctttgacc
aaatttgttttgggaacagttggaaaagaagatgatgacgacgaagaggacgtgcctggt
ccagatgaagcgcataagatggaagagatcccgatatcgtcaactttggtgaagagaaga
gaggaggttgctgctcgtgttttccagaggtggtatcgaaaaatcatgagtgaaagaaaa
cagaaggagaaacacacggacaatcgcacacctcacgaactgacggaacagacggaaata
gaacaggcaaagtctagtccaggggaacgtaagcgaaaacaaacgtctatattgcctatc
attttaaaacctacactgttggacccgacaaacttaatcagatcaccaaaacttacaatt
agagggaaaaaggatacgaatagctga
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