Branchiostoma floridae (Florida lancelet): 118407834
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Entry
118407834 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM-like
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118407834
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118407834
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118407834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf-HC5HC2H_2
zf-HC5HC2H
C1_2
PHD
Prok-RING_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
118407834
NCBI-ProteinID:
XP_035664266
UniProt:
A0A9J7KBL1
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MVATRQHSAVAIVTGLCGSWRNVMESLVVMVTAMSGPSTAGASEEAMMGNLGSSGTSSAD
RGGGFLRRSERIGRRLGLFSSARVGEAPSVPSTASASASDEPAEPRSRRRRGASCFPRRS
RHHSRTRSRSPLESRSSSPTVSTASSSGYVTATPRTVESASQSSSQSSASSGRVRRTGAR
WAEFLARGSQSRRDSPGTAAGGDSSGGNGSSSTILNLSTLYPSGEFVTTTSNESTSTVHV
RVRGPVRDSSQAATEPEVVPTGRFGFGYNLRSRARAQRAASTPPAGPAPAARSRPAVVPT
GRFGYNLRSRARAQRAASTPPAGPTPAARSRPAARPTAESSPDEAGLRLADLLSLRISVR
PTDRDTSSAAPESATAGQPDASEARGREDTGSAEARGREDSSSAGASSPESRGESAARAQ
GTRITIIRIRTAPSTPDLGSREGAQPRIAVSTHNVNGPTHASSTAARREDSTTEAAGNGS
SSSTPSSESRSPGAAPASGPLRERISVMEFDTNGDSDNESDSDILEMINSRLRQVAARTE
EQEGAIRPRRALSANQASPLTLVFLGIVISADGEDTPRGLTKEQIDTLPTRTFSEPSREE
NATNSCNVCITDYIEGSVLRCLPCTHEFHAVCVDRWLGINASCPVCRHTVTSEA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggtggcaaccagacaacactcagcggtcgcaattgtcacaggtttatgtgggagttgg
aggaacgttatggagtccttagttgtcatggtaaccgccatgtcaggccccagtaccgct
ggagccagtgaagaggctatgatgggaaacctgggctcctcgggaacgagcagtgcagac
aggggaggggggttcctccggaggagcgagcggattggccggaggctggggctcttcagc
tccgcccgggtgggcgaggcaccgtcagtgccgtccacagcgtccgcttcagcgtctgac
gagccggcagaaccgagaagtagacgccggcggggggcgagctgtttcccgcgcagaagc
cgccaccattcccgcaccaggagcaggtccccgttggagagtcgttcgagttccccgacc
gtgagcacagcgtcgtccagcggttatgtcaccgccacaccgcgtacggtcgagtccgcc
tcccagagcagcagccaatcgtcagccagctccgggcgtgtccgccgtacgggcgcgcgg
tgggcggagtttctggctcgcgggagccagagcagaagagacagtcccggtactgccgcg
gggggtgacagcagtggtgggaacggcagttccagcaccattctgaacctgtccactctg
taccccagcggagagttcgttaccacaacgtctaacgagtccacgtccaccgttcatgtc
agggtccggggaccggtacgggattcctcgcaggccgccacagaacctgaggtggtgccc
acgggtcggtttggctttgggtataacctgcgtagtcgcgcccgtgcccagcgtgccgcc
tccacgcccccagccggcccagcgcccgcggcgcgctccaggcccgcggtggtgcccacg
ggtcggtttggttataacctgcggagtcgtgcccgtgcccagcgtgccgcctccacgccc
ccggccggccccacgcccgcggcacgctccaggcccgcggcgcgccccacggcagagtcc
agccctgacgaggccggcctgcggcttgccgacctgctgtcgctgcgaatcagcgtccgg
ccgactgatcgtgacacgagttccgccgctcctgagtccgcaaccgccggccaaccggac
gcctcggaggccaggggcagggaggacaccggcagtgcagaggccaggggcagggaggac
tccagcagtgcaggtgcgagcagcccggagagccgcggggagtcggcagcgagggcccag
ggaactcgtatcacgattatccgcatccggaccgcgccgtctactcctgacctgggcagc
cgggagggggcgcagccacgcatagctgtctccacccacaacgtgaatggaccgacccac
gcctccagcactgcagctaggagagaggacagtaccactgaagctgcggggaatggcagt
tcctccagcacgccatcctccgagtcccggagtcctggagcggcgcccgcctccggaccg
ctccgagagcgcatctctgtgatggaattcgacaccaacggggactccgacaacgagtcg
gacagcgacattctggagatgatcaacagtcggctgcgacaagtcgccgccagaacggag
gaacaggaaggcgctatccgcccccgcagagcgctgtcagcaaaccaggcctccccgctc
actctggtgttcttaggcatcgttatatctgcggacggagaggatacgccccgcggcctg
acgaaggaacaaatcgacaccctgccgacgcgcacgttcagcgagccttcccgcgaggag
aacgccaccaactcttgtaacgtctgcatcacggattacatcgaggggtccgttctacgc
tgtcttccatgtacacacgagtttcacgccgtctgcgtcgatcgctggctcggaatcaac
gcgtcctgtcccgtctgtcgccacacggtaacaagcgaagcttag
DBGET
integrated database retrieval system
