Branchiostoma floridae (Florida lancelet): 118409607
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Entry
118409607 CDS
T01074
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
bfo03029
]
118409607
Enzymes [BR:
bfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118409607
Mitochondrial biogenesis [BR:
bfo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
118409607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Med15_fungi
Motif
Other DBs
NCBI-GeneID:
118409607
NCBI-ProteinID:
XP_035666640
UniProt:
A0A9J7KME0
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Position
2:complement(18963604..18979175)
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AA seq
1238 aa
AA seq
DB search
MTLILRLTSVRSFRSTLGSSVGLGSVWFGGCPTCNKLRTAARYQNTVDFRTYANVAAKKK
DPRVELYTVLSSRAQQLSKPEKGEGVRQRQKKQEILKKRKVSSHVRLEPVTSPLHPAQQT
HAQRSLSSKSTVNMYTTDEVEQMQTSQRDNSVSKWQATQKKPFRNTPRVTESLVEEELDV
LEEEEEAREKIARRQEEMEKMKNIERRQNEEQAYILSFMEACVSIGEVDRATRTLHYLKN
QKKKRKHLNADIYNVVLKGWAKQANMDKIRHLFFMMTKDALQPNLQSYAAALECMGRAGL
TGGVPIRCVKQMYKEGFNLEDIFRDCTFEADEQEYILKAIQDGCGMADFAPPLPPLPQRC
TTDLVSSIYADENNSHDSDESLQVQPLFTEDEVLQRCNAQLEMETQHWLKVESVEGQRQS
SQEVLKLRELLQTHKTMWEAGLLEAFRTLKKQMDRQSKVKGQVNIYPFLCVLDDQEYVEM
MVQAICLVAVTGDPLLIIARELGMKIQQKYRIKQKLQSGGVEKIGQIYQDYCSFMVNNNQ
GGKPGQARELWSQLEGGQGVGPGVGDECAWPINLIINLGSLLVDAMVREVKIDNNLFRKT
SEQKLIPALYHMYTYRNIKQVGIIKPHPMLVQLVEGAQDTSLVFDSSLLPMLMPPVPWSS
VKKGGFLLSPTKLMRSNDATLQHELLLEKVGTSELYPILDSLNQLGACAWKINQPILDLV
IRVFNNKGSKELDIPQPVSEAPTFPKLGTEILTNGDKQAMRKQMAQVRKLRSEMHSLRMD
MLYKLSIANRFRHEIFYFPHNMDFRGRVYPCPPHFNHLGSDVARSILVFAEGRPLGEKGL
EWLKIHLVNLTGFKKKNSQMERLEYANEMMEEIFDSADNPMTGHKWWMTADEPWQALACC
MEIANAVRSPDPQAYVSHFPVHQDGSCNGLQHYAALGRDITGAHQVNLMPAESPQDVYSG
VARQVEKLRAKDAEEGVKVAQVLDGFIKRKVVKQTVMTVVYGVTRYGGRLQIQRQLKDIP
DFPQDHVWEASGYLVKKVFMSLREIFTLAREIQDWLTESARLISHVGSAVQWVTPLGLPV
VQPYHKVKNKLVRNEMQNIILNVSTDTSERPDIIKQKNAFPPNFIHSLDSTHMMLTSLHC
QQAGIQYVSVHDCFWTHACTVDTMNRICREQFVSLHSQPILEDLSKYLLKEYGSLPPELQ
TSPTAVSKHDKLMEVLVDVPPKGEFDLRRVLDSTYFFS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaattcttcgcctgacatctgtacgaagttttcggtcgacgctaggttcctcc
gtgggtctgggatcggtctggtttggaggatgtccaacgtgcaacaaactcaggaccgct
gcacggtaccagaatactgttgacttccggacgtatgcaaatgtggctgcaaagaagaaa
gaccctcgtgttgagttgtacacagtgttgtcatctagagcacaacagctaagcaagcca
gaaaaaggtgaaggagtcagacaaagacagaagaaacaagagatactgaagaagaggaaa
gtgtctagtcacgttagacttgaacctgtgacatcaccccttcacccagcacaacagaca
catgcacagagaagtctatcaagcaaatcaaccgttaacatgtatactactgatgaagtg
gaacagatgcaaacatcacaaagagacaatagtgtgtcaaaatggcaggcaacacagaag
aaacctttcagaaacactcccagagtcacagaatcattagtggaggaagagctggatgtt
cttgaggaagaggaagaagctcgtgagaaaattgcaaggagacaggaagagatggagaag
atgaagaacattgagaggaggcagaatgaggaacaagcttatatcttgtcatttatggaa
gcatgtgtgtctataggagaggtggacagagctactagaaccctgcattacttgaagaat
cagaaaaagaaaaggaaacatttaaatgctgatatctacaatgttgtgctgaagggatgg
gcgaaacaggccaatatggacaaaattcgccatttgttcttcatgatgaccaaagatgcc
ctccagcccaacctacagtcctacgcagctgcactggagtgtatgggcagagcgggattg
acaggtggtgtgcccatcagatgtgtgaaacagatgtacaaggagggcttcaatctagaa
gatatttttagggattgcaccttcgaagctgatgaacaagagtacatattaaaggcaata
caagatggttgtgggatggctgactttgccccaccactgcctcctctgccccagaggtgt
acaacggatctcgtatcatctatctatgcagacgaaaacaacagccatgacagtgatgag
tccttgcaagtacagcccctgttcacagaagatgaggttttacagagatgtaatgcccag
ctggagatggagacccaacactggctgaaagtagagtctgtggaggggcagagacagtcc
agtcaggaagtcctgaagttgcgtgagcttctgcagactcacaagacaatgtgggaggca
ggtttgttggaggctttcaggacactcaaaaaacagatggacaggcagagtaaagtgaaa
ggccaggtgaacatctatcctttcctgtgtgtgctggacgatcaggaatatgtggaaatg
atggtgcaggcgatctgccttgtagcagtgaccggtgaccccctattgatcatagcgcgt
gagctcggcatgaagatccaacaaaagtaccgcatcaaacagaaactacagagtggcggt
gttgaaaagattggacagatttaccaagactactgcagcttcatggtgaacaacaaccag
ggagggaagcctgggcaggccagggaactgtggtcacaactggagggggggcaaggtgtc
ggaccgggagtgggtgatgagtgtgcttggcccatcaatctgatcatcaatttaggaagt
ctgttggtagatgcgatggttagggaggtgaagattgacaataatctcttcagaaagacc
agtgaacagaagctgatacctgccctgtaccacatgtacacctataggaacatcaagcaa
gtgggcatcatcaaaccccaccccatgctggtacagttagtagagggtgcccaggacacc
agccttgtgtttgacagcagcctcctgcccatgctcatgcctcctgtgccttggtcttct
gtcaagaagggtggctttctattatctccaaccaagttgatgcgatccaatgatgccaca
ttgcaacatgaactactcctggagaaagttgggacatcggagttatatcccatcttggac
tcacttaaccagttaggagcctgtgcctggaaaatcaatcaaccaatcctggacttggtt
attcgagtgttcaacaacaagggcagtaaagagttggacattccccaacctgtctctgag
gcccctaccttccccaaactgggaacagagatcctaacaaatggagataagcaagcaatg
aggaagcagatggctcaagtgcggaagttacgcagtgagatgcacagtcttaggatggac
atgctgtacaaactgtccattgctaatcggttccgtcatgagattttctactttccccac
aacatggatttccgaggcagagtctacccatgtcctccccacttcaaccacctagggagt
gatgtggccaggagcatcctggtgtttgctgaaggacgccctttaggagaaaaggggcta
gaatggctcaagatccatctggttaatcttacaggcttcaagaaaaagaactcccagatg
gagaggttagagtatgcaaatgagatgatggaggagatatttgactctgcagacaaccca
atgacgggccataagtggtggatgacagcagacgagccctggcaggcccttgcctgttgt
atggagatcgccaacgctgtacggtcacccgaccctcaggcttacgtctcacacttccct
gtacaccaggatggttcatgtaatggactacaacattatgctgctctagggagggacatc
acaggtgctcaccaggttaacctcatgcctgctgaatccccccaggatgtctatagtgga
gtagcccggcaggtggagaaactgagagctaaggatgcagaagaaggagtgaaggttgct
caggtgttggacggcttcatcaaaagaaaggtggtgaaacagacagtgatgactgtagtt
tacggggtgacgagatacggaggacgcctccagattcagcggcagctgaaagatatccca
gacttccctcaggaccacgtgtgggaggcctctggttacttggtgaagaaggtcttcatg
agtctgagagagatcttcactctagccagagagatccaagactggctgacagaaagtgcc
cgtctgatttcccatgttggctcagcagtgcagtgggttacccccctcggccttccagtg
gtacagccctaccacaaagtcaagaacaaattggtcagaaatgagatgcagaacatcatc
ttgaatgtttccactgacacctcagaacgaccagacatcatcaaacagaagaatgctttc
cctcctaacttcatccactctttggactccacacacatgatgctcacctccctccattgc
cagcaagctggaatacagtacgtttctgtccacgactgtttctggacacacgcctgcact
gtggacactatgaacaggatctgccgggagcagtttgtgtcgctccacagccagccaatc
ctggaggacctctctaaataccttctcaaggagtacggaagtcttcctcctgaactccag
acctcgcctaccgcagtctccaaacatgacaaactcatggaggtgctggtcgatgttcca
ccaaagggagagtttgacttgaggagggtgctggactccacctatttctttagctag
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