Branchiostoma floridae (Florida lancelet): 118410048
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Entry
118410048 CDS
T01074
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118410048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118410048
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
118410048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
118410048
NCBI-ProteinID:
XP_035667414
UniProt:
A0A9J7MH59
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All DBs
Position
2:complement(8152278..8168672)
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AA seq
1049 aa
AA seq
DB search
MIKTEKHLRLKTGTGRTVRVVREHYLRDDVSCNSRLCMAECRNEGPGLLPKGVTHYVVPD
CQVTRDYLEILEFPEIRGVLFTGTVVHSMQHQGGRRAYGRLRTLLRDPRQECAVFANEFQ
QYAYCPREHGETLEKWQSRSTYKAAEWYYNHLAGQIPVVVLSEDPQIQEEYGPMTPGVFV
VNMGEYLNNFWPDLQAAHDIYESLVAGLQEKGKSTGSKEYKDYLPVEVVEAGIKSGRYLR
GNLQVNKHRAQQEAFVRMSSSSGGKDVELHTDVIVVGTALRNRAVHGDTVAVELLPRSEW
RGRSTAITDNTEGVSSEAEEESNSVMPTGKVVTVMQRNWRDYVCSFAEDEGTQGQKKNPG
KVLVIPFDYRIPKIRISTRQADQLKDHRIVVRIDSWEADSQYPNGHFVRSLGPSGDLETE
TAALLVENSISVALFSEGQVKELPTNTEESPWVMQAEEVARRRDLRHTHLIFSIDPIGCE
DVDDTLSIRKLPNGHLELGVHIADVTYFVKPNSLTDLEAKARATTVYLADRRYDMLPSIL
SADLCSLLGSVDRYAMSVLWELDSNYEVLDVWYGRTIIRSAYKMFYEAAQAVHDRKPEEE
LIQSIPELQELDTDTARNRLEQIRWAVDSLMDIADHLRAGRLREGGLELEGVEVQVQLGD
SKEIQKLVPKQPLAVHETVAECMIFANHWVAKRIAEAFPNNALLRHHPLPRQEHFESLVE
CAKAQGFSIDTSSNKALAESLDKCVNKDDPVVNKLLRTLATQAMSNAQYFSTGSLPRDQY
FHYGLALDQYTHFTSPIRRYADVIVHRLLLAAIGVEDERSAGVIKNQELEELSQHINNRN
RAAQHAQRASTELFQALYFKDKDPEDECCIADAVIFSLRTNGVLLFVPKYGVKGPLYLKD
KDGLVVCVEKDGTVSHTSGTLTRKQFEVVVQSTKGSATFRLFQHLTVRLSLQKSRAHPQT
LTFSLVAAKPYKPDLERVKGESSAPARTDVVKEVKSSSADTSTSHGPHDMTAAMGSEFPE
LLCEYGQSRSCDTLYGLMEVFREMSLAEA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgataaagacagagaaacacctgcggctgaagacaggtaccggccggacagtccgggtg
gtgagggaacactacctcagggatgacgtgtcctgtaacagcaggctgtgcatggctgaa
tgcaggaatgagggtccaggcctcctgcccaagggtgtgacccactacgtggttccagac
tgccaggttaccagggattatcttgagatactggagttccctgagatcaggggagtgctg
ttcactggcacagtagtacacagtatgcagcatcagggtggcaggcgtgcatacggccgg
ctgaggactctcctgagggacccacgccaggagtgtgcagtgtttgccaatgagttccag
cagtatgcctactgtcccagggagcacggagaaacattggagaaatggcagtcaaggtcc
acatacaaagcagcagagtggtactataaccacttagcaggacagataccagtggtagtg
ctgtcagaggatccacagatccaggaagagtatggccccatgacacctggcgtcttcgtt
gtaaacatgggggagtatctgaacaacttctggcctgatcttcaggctgcacatgacatc
tatgagtccctagtcgctggtctacaggagaagggaaaaagcacaggtagtaaggagtac
aaggactacttacctgtggaggtggtggaggcagggatcaagtctggacgctacctccga
gggaacctgcaggtcaacaaacacagggcacagcaggaggccttcgtcaggatgtcaagt
tcctcaggtgggaaggatgtcgagcttcacacagacgtcattgttgttggtacagctctc
aggaaccgtgctgtccatggtgacacagtagcagtggagctgctccccaggtcagagtgg
agaggtcgctcaactgccatcacagacaatactgaaggtgtgagcagtgaagcagaagag
gagtccaacagtgtgatgcccacaggaaaagtggttactgtgatgcagaggaactggagg
gattacgtctgcagctttgctgaggatgagggaactcagggtcagaagaagaaccctggc
aaggtgttggtgatcccctttgactacagaatccccaagatcaggatcagcaccagacag
gcggatcagctcaaggatcacagaattgtagtgaggatagactcgtgggaggcggactcc
cagtaccctaacggacactttgtgcggtcgctgggcccgagcggagacctggagacagag
acagctgcactgctggtggagaacagcatctctgtggctctattctccgaggggcaggtg
aaggaacttcccactaacacagaggagagcccctgggtcatgcaggcggaggaggttgct
aggagacgggacttgagacacacccacctcatcttcagcatcgacccaataggctgtgaa
gatgtagatgacacactgtcaatcaggaagctaccaaatgggcatcttgagttaggagtc
cacattgctgatgttacatatttcgtcaaaccaaactcactcacagacctggaagccaaa
gccagggctactacagtctaccttgcagaccggcggtatgacatgttacccagcatcctc
agtgccgacctttgctccctactcggaagtgttgacagatatgccatgagtgttctgtgg
gaactggacagtaactacgaggtgctcgatgtttggtacggcaggactatcatcaggtct
gcctacaagatgttctatgaggcagcccaggctgtccatgacaggaaaccagaggaggag
ttaatccagagcatcccagaattacaggagctggacactgacactgccaggaacaggctg
gagcagatccgctgggcagtcgacagtctgatggacatagctgaccacctgcgggcgggg
aggctgcgggaggggggtctggagctggagggggtggaggtacaggtccagctgggggac
agcaaggagatacagaaactggtgcccaaacagccgttagcggtccatgagacagtagca
gagtgtatgatatttgccaaccactgggtcgccaagaggatagcagaggcctttcctaac
aatgccctgctgaggcaccatcccctacccagacaggagcactttgagagcctggtggag
tgtgccaaggctcagggcttctccatagacactagctccaacaaagctctggcagagtcc
ctggacaagtgtgtcaacaaggatgaccctgttgtgaacaagctcttacggacccttgcg
acccaggccatgtccaatgcccagtacttctctactggatctttgcccagggatcagtac
ttccactatggcttggctcttgatcagtacacacacttcacttcccccatcagaagatat
gcagatgtcattgtgcacagactgctgctggctgccataggtgtggaggatgagaggtca
gctggggtcatcaagaaccaggagttagaggagctcagtcagcacatcaacaaccgcaac
agggccgcccaacatgcccagagagcatccacagagctgttccaagccttgtactttaag
gacaaagacccagaggatgagtgctgcatagcagatgctgtcatcttctctctaaggacc
aacggggtgctcctctttgtaccaaagtatggagtgaagggccctttgtatttgaaggac
aaagatggtctggtggtgtgtgtagagaaggatgggacagtgtcacatacatcgggcaca
cttaccagaaagcagtttgaagttgtagtacagtcaaccaaggggtcggcaacattcaga
ctcttccaacatcttactgtgaggttgtccctacagaagtcacgagcccatccacaaacc
ttgaccttcagcttggtggcagccaaaccctacaaacctgaccttgagagggtcaagggt
gaaagttcagcaccagcaagaactgatgttgtaaaggaagttaagagcagttctgccgac
acatccacctcgcacggtccccacgacatgactgcggccatggggagcgagttccccgag
ctgctgtgtgaatacggacagtccaggtcatgtgacacactgtacggtctgatggaagtg
ttccgagaaatgagcctggctgaagcgtga
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