Branchiostoma floridae (Florida lancelet): 118412792
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Entry
118412792 CDS
T01074
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118412792
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118412792
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GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TRP_2
YVC1_C
LiaI-LiaF-TM_PspC
Motif
Other DBs
NCBI-GeneID:
118412792
NCBI-ProteinID:
XP_035671706
UniProt:
A0A9J7MLQ3
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Position
4:complement(25143238..25149047)
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AA seq
600 aa
AA seq
DB search
MTPVKMAATRNNYHILKLLLDHGFPVPSPDDHQWTSVQTSRAWLTAYRAVCSPSLILLTS
PDPFRTCFRTARALRNACWKREHYRAELEELADQCETFACELLAEVRDSDELETVLEFNP
GETTDKQVLRGTLEAAVEMEQKKFVSHALSFEYADLLAAGDIYELLDSKTLQQWAIWQLV
LFAVAIGIFHPFLTILHILAPTTKPGRLLEIPAIRGMCWFVSLLSLLIVLIVEAQTFRVS
SEEIDRMVQNIPTSAVQLSWTQAFIFLWMCGFFVEQINKVWHQGISPYFQSFWNLLDFFA
VALYITHVALRLVAIAKWDLHDGHDISLDWAARARWNGFEPLLVSDAVFAIFTLDVFLRA
MCFLRMSRNLGSLQISFGRMFMDIIKFVIFLGLVDLAFACGFNQLYWFYGSVHNYLCEKY
QQSNLQNIGCSKAHGYATLSRTMLTLFWAEFGISDLSMLELKPGSSPVEALQLMEEPIFT
EVVGTIMFALFQVVAVLVLLNLLIAIMTTSYQMTEDNKDQEWAYMSVRDAFDVIRGNLSL
PPPFNLLMRLKSGLVHLFCSSPCSRTEIGPPRLSGHHKYQTVIDKLAKRYRLRKEREKAD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgactccagtcaagatggccgccacacggaacaactatcacatcctcaaactcttgtta
gaccatggcttccccgtcccttcacctgacgatcaccaatggacgtcagtacaaacctcc
cgtgcctggctcacggcttaccgtgccgtctgtagcccctccctgatcctgctaactagt
cccgacccgttccggacgtgtttccggacggccagagccttgcggaacgcctgctggaag
cgggaacactaccgggccgagctggaggagctggcggaccagtgtgagacgtttgcctgc
gagttgctggccgaagtgcgagactcggatgagctggagaccgttctcgagtttaaccct
ggggagactacggacaaacaagttttgcggggaactttggaggcggcagttgaaatggag
cagaaaaagtttgtgtcgcacgccctgagcttcgagtatgcagatttacttgccgcagga
gacatctacgaacttctcgacagcaagacgcttcagcagtgggcaatatggcagttggtg
ctgttcgcagtagctatcggcatattccacccatttctgactattctgcacattttggca
ccaacgacaaagcccgggaggcttctggagattccagcaatccgcggaatgtgctggttc
gtctccctactgagcctactcatcgtgctgattgtagaggcgcagacgtttcgagtgagc
agtgaggagatagacaggatggtacagaacatcccgacgtctgctgtacaactgtcctgg
acacaagcattcatcttcctctggatgtgcggattcttcgttgagcaaatcaacaaagtt
tggcatcaaggaatatccccgtatttccaaagcttctggaatctgcttgacttctttgcc
gttgcactctacattacacatgtcgccttacgacttgtggctattgcgaagtgggatctc
catgacggccatgacatctcactggactgggcggccagagctagatggaacgggttcgag
ccgcttctcgtgtccgatgccgtgttcgccatctttactctagatgtattcctgcgcgcg
atgtgctttctgcgcatgtcacggaatctggggtctctccagatctccttcggtcggatg
ttcatggacatcatcaagttcgtcattttcctcgggctcgtggacctcgcgtttgcctgc
ggtttcaaccaactctactggttctacgggtctgttcacaactacctctgcgagaagtac
cagcagagcaacttgcagaacatcgggtgttctaaagcccatggttatgccaccctctcc
aggacgatgcttactctgttctgggcggagttcggcatcagtgatctctccatgctggag
ctgaaacccgggtccagtccggtggaggcgcttcagctcatggaagagccaatcttcacc
gaagtagtggggaccatcatgtttgcgcttttccaagtagtggcagtactcgtacttctc
aacctgctgatagccatcatgactacgtcctatcagatgactgaggacaacaaagaccag
gagtgggcgtacatgtctgtcagggatgcgtttgacgtcatcagagggaacctgtcgctg
ccaccacccttcaatctcctcatgaggctaaaatctggactggttcacctcttctgttcg
tcaccgtgtagtaggacggagattggaccgccaaggctcagtggacaccacaaataccaa
acagtcatcgacaagctggccaagcggtaccgtctacgaaaagagagagaaaaggccgac
tag
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