Branchiostoma floridae (Florida lancelet): 118416036
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Entry
118416036 CDS
T01074
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013
Nucleocytoplasmic transport
bfo04141
Protein processing in endoplasmic reticulum
bfo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118416036
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118416036
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118416036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118416036
04131 Membrane trafficking [BR:
bfo04131
]
118416036
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118416036
Membrane trafficking [BR:
bfo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118416036
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118416036
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
118416036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
118416036
NCBI-ProteinID:
XP_035676974
UniProt:
C3YVL3
LinkDB
All DBs
Position
5:8565078..8570926
Genome browser
AA seq
318 aa
AA seq
DB search
MVSVLNTVDTGHEDMIHDAQMDYYGVRLATCSSDKTVKIFDIKNGGQILAAELRGHEGPV
WQLAWAHPMYGNILASCSYDRKVIIWKETNGQWDRLYEYANHDSSVNSVCWAPHEFGLML
VCGSSDGAVSIISSTADGQWDTKKINNAHTIGCNAVSWCPAVAAGSLVDQPSSQRPQQTR
RFVTGGCDNLVKIWREEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTQTIASCSQDGRVI
IWKSEDGTSWTSKVLNKFPDVVWHVSWSITGNILAVSGGDNKVSLWKESLEGQWVCVSDV
NKGQGQTIAPAEPQKPEQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgttctgaacactgtggatactggccatgaagatatgatccacgatgcccag
atggactactatggagtccgcctggccacatgttcctcagacaagactgtgaagatcttt
gacatcaagaacggaggacagatcctagcagcagaactcagaggacacgagggtccggtg
tggcagctggcctgggcacacccgatgtacgggaacatcctggcatcgtgttcgtatgat
aggaaggtcatcatatggaaggagaccaatgggcagtgggacaggctgtatgagtacgct
aaccatgactcttcagtgaattctgtgtgctgggctccccatgagtttggcctaatgctg
gtgtgtggttcatctgacggagctgtgtcaatcatctcaagcacagctgatggccagtgg
gacaccaagaaaatcaacaatgctcacacaattggctgtaatgcagtaagctggtgccca
gccgtggctgcaggctccctggtggaccagccgtcctcacagcgccctcagcagactcgc
agatttgtgactggaggatgtgacaacctggtcaaaatttggagagaggaggatggccag
tggaaggaagaacagaaactggaggctcacagtgattgggtgagagatgtggcctgggct
ccgtccataggactccccacacagaccatagccagctgttcacaggatggaagagtcatc
atctggaagagtgaagatggcacgagctggacctcgaaggtgttgaacaagttcccagac
gtggtgtggcatgtgagctggtccataacgggcaacatcctggccgtgtcagggggagac
aacaaggtgagcctttggaaggagtcgttggaaggacagtgggtctgcgtcagcgatgtc
aacaaaggtcaaggtcaaaccatagctccagccgaaccccagaaacccgaacagtaa
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