Branchiostoma floridae (Florida lancelet): 118419311
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Entry
118419311 CDS
T01074
Name
(RefSeq) transient-receptor-potential-like protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfo04040
]
118419311
Ion channels [BR:
bfo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118419311
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
YVC1_C
NOA36
Motif
Other DBs
NCBI-GeneID:
118419311
NCBI-ProteinID:
XP_035681564
UniProt:
A0A9J7LEV7
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Position
7:3742037..3756295
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AA seq
716 aa
AA seq
DB search
MRSRLRSKERVFLEAVGRGDKATVVRCLQPPDPVDVNVRTALGRSALTTAVTMENVEIVE
ILLKQDGIRIGNALLHAIREGVYRIVEMMVNHPSITPDMLGAGWSRVAPESEDFSSCVTP
VMLCAQLNQFEILHLLLSQGATIANPHKPGCECTGCKGSNKDDSLRHSIVRIETYRALAS
PSWISLTSSDPVLTAFKLSWDLRHLATNEREFKESYLNLAEQCRKYPVELLDQCRSSVEL
NSILNQACDDDEDVNDDEEEDEDDGIDEDHQKPSLYRLKLALKYEQKQFVAHPHCQQLLT
SMWHEGLPGWRRRSVFARLLMVMSLMTLMPIVAVCYVISPRSRMGRFTNYPFIKFASQAG
SFAVFLILLTMASPREENMTNRRGPPPSTVEVLIVFYVAGLVWSECKQLWNQGMHLFIRD
YWNWLDFIMNSLYLATISLRVVAYVRVTAGTDFPMETERKNWPSDDPTLISEGLFAVANV
FSFFRVIYLFQTNPHLGPLQITLGSMLLDVGKFLSVFFLIMASFAVGFSQLYGFYRDTEV
CEDEGGQRVCRGNPTEFLTFDAAVMTLFWSLFKLIGQETLDMEEKNAFLVSTGSLLLAAY
QIAAVVILLNQLIATMADSFQDIDTHADMEWKYARTKLWLSYFDNGTTLPPPYNVIVTPK
SIYYFLKVRGRDFYWRMRARCPGCTTKDAGMAGEGPDVSGEAGQSPVGNYAPSGTG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccaggcttcgatccaaggagcgcgtgttccttgaggcggttggtagaggcgac
aaggcgactgtggtgagatgtctccagccgccagacccggttgatgttaacgtcaggacc
gccttgggtcggagcgccctgaccaccgccgtcaccatggagaacgtggagatagtggag
atacttctaaagcaggacggcatcaggatcggaaacgcgctccttcacgccatacgtgag
ggcgtgtatcgtatcgtggagatgatggtcaaccatccgagcatcacacctgacatgctg
ggtgccgggtggagccgcgtggctccggaaagtgaggacttctcttcctgcgtcactccc
gtcatgctgtgcgcgcagctcaaccagttcgagatcctccatctcctcctgtcacagggc
gctaccatcgcaaacccacacaaacctggatgtgagtgcacaggatgtaaaggtagtaac
aaagacgacagccttcgtcactccatcgtccggatcgagacctatcgggccctggcgtcg
ccatcttggatctcgctgacgtcatcagacccagtcctgacggcgttcaagctcagctgg
gatttgcgccacctagcgaccaatgaacgagagttcaaggagtcgtatctgaacctggcg
gaacagtgtcggaagtaccccgtagagctgctggaccagtgccgcagttccgtggaactc
aacagcatcttgaaccaagcctgtgatgatgatgaagatgtgaatgacgacgaagaggaa
gacgaggatgatgggatagatgaggaccaccagaagccgagtctataccgactcaagctg
gcgctcaagtacgaacagaaacagttcgtggcccacccccattgccagcagctcctgacc
tccatgtggcacgagggcctgccgggctggcgcaggcgcagtgtgttcgccaggctgctg
atggtgatgtcactgatgacgttgatgccgatcgtggcggtctgttacgtcatctctccg
cgcagccgcatgggaaggtttacgaactacccgtttatcaagtttgccagccaagcgggt
tcgttcgcggtgttcctgatcctgctgaccatggcctctccccgggaagagaacatgacc
aacaggcgcggcccgccgccatccaccgttgaggtcctcatcgtcttctacgtagcagga
ctagtgtggagcgagtgtaagcagctgtggaaccaaggcatgcacctgttcatccgggac
tattggaactggctggacttcatcatgaactcactctacctggcaaccatatccctccgt
gtggtcgcatacgtcagggtcacggcaggaactgactttccaatggagacggaacggaag
aattggccctcggacgatcccactctcatctcggaggggttgtttgctgtggccaacgtc
ttcagctttttccgtgtcatctatctatttcagaccaatccccacctcggcccactgcag
atcacgcttggctccatgctgctggacgtcggcaagttcctgtcggtgttcttcctcatc
atggcgtcgttcgcggtggggttcagccagctgtacgggttctaccgcgacacggaggtg
tgtgaggacgagggagggcagagggtctgccggggaaaccccaccgagttcctaacgttt
gacgctgcggtgatgacgctgttctggtcgctgtttaagctgattggtcaggagacgtta
gacatggaggagaagaatgcgttcctggtctccacaggctcgctgctgctcgccgcgtac
cagatcgccgcggtggtcatcctgctcaaccagctcatcgccaccatggcggactccttc
caggacatagacacccacgccgacatggaatggaagtacgcgagaaccaaactctggttg
agttacttcgataacgggactaccttaccccctccgtacaacgtcatcgtcacacccaag
tcaatctactactttttaaaggtacggggcagggatttctattggcgcatgcgtgcaagg
tgcccgggctgtacgacaaaggatgccggtatggcgggagaaggcccggatgtttcgggg
gaggcgggacagtcacctgttgggaactatgcacctagcggcacaggctga
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