Branchiostoma floridae (Florida lancelet): 118420046
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Entry
118420046 CDS
T01074
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118420046
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bfo01001
]
118420046
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118420046
03036 Chromosome and associated proteins [BR:
bfo03036
]
118420046
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
118420046
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118420046
Protein kinases [BR:
bfo01001
]
Serine/threonine kinases: Other
TAF1 family
118420046
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118420046
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
118420046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
118420046
NCBI-ProteinID:
XP_035682645
UniProt:
A0A9J7LJ29
LinkDB
All DBs
Position
7:complement(13728562..13757334)
Genome browser
AA seq
1807 aa
AA seq
DB search
MDSGDEDDREPPLSLTGFLFGNIDQKGQLEDDDILDQESKRHLNQLNSLGGFGSLVQEIT
ADTDNNGDDEQDSQTSSSAGKPSSLPQIWRGAKRRRKRRRPTGEEPLEDSYEWEFDYAPI
PPPDQWMSDDEEKMMRPMEALPDTGVRKEASNDDNRPEIPEWRYGPARYWYDMLGVPETG
EGFDYGFKLAQNSDSDSGNEGDDEREESKEPPKPSEPEPQKEEPTEKTEDQPEDMETSEE
AEVVPKSEFPEEEYFYMVAQRSWEDDIVWDGEQIKDKVLQSKSAAMAGWIPTSTSRTAQS
FSSQQGLNINVTLPNSIPSTSSGKNQQDPDDEQLWYSLFPVENPELVYGNWEDDIIWDPQ
NMKEIPKPKVMKLDPNDENIIFGIPDDPDPLPDDTPSKDKKEVRQSTLLLKKRGLTKPES
DQLSEPGKKKKNVSNVSHNEQKDPWNLSNDEYYDPKHSLQETTLRASMGGNLVQHSTPAI
ELRQPFFPTHMGPIKLRQLHRPPLRKFSHGPLAQPGPHSVLPLLKQIKKKAKLREQERQA
SGGGEVFFMRTPQDLTGMDGEILLAEYSEEYAPLVSQVGMATKIKNFYKRKAGHTTGPPK
FEYGETVYAHTSPFLGPLHPGQALQAFENNLFRAPIYQHKIPETDFLVIRTRVHYYIREF
QGLFCVGQECPLYEVPGPNSKRANNHVRDFLQVFIYRLFWKSKDKPRRIKMEDIRKAFPT
HSESSIRKRLKLCADFKRTGMDSNWWVLKPEFRLPSEEEIRAMVSPEQCCAYYSMLEAEQ
RLKDAGYGEKSLFAPEEENEEEFQRNIDDEVRTAPWNTTRAFISAMKGKCLLAVMGVADP
TGCGEGFSYIKVPNKPQSSKDDNSPQPVKRTVTGTDADLRRLSLKNAKQLLRKFGVSEEE
IKKLSRWEVIDVVRTMSTEQARSGEAGMSKFARGTRFSVAEHQEKYKEECQRIFDLQNKV
LSSAEVLSTDEESSSADDSDFEEMGKNIENMLANKKTSQQITREREEAERKELQRMIMGE
DTSKDRDKDDKRESKRSSSTGTPIPGARGQDDDLESIGSSFTGRRLKIYRTFKDEDGKEY
VRTETVRKPSVIDTYVRIRTTKDENFIKNWLAQDEQHKEEMRRERRRIQEQLRRIKRNQE
KEKMAPPPKKKKKKPDQPPLKLKCGACGQIGHMRTNKECPLYERSHAPPSHPVAMTEEQE
EEVERYTIKEDENLIKVEGTKLILGKSLVDQAAAVRRESLILKFPKAMQPKKDEKKKRRV
GTVTHCDYLKRPKKSANRRRTDPVVTLSSILENFLNEMRDLPNTYPFHQPVNPRMVVDYY
KIVHRPMDLQTMREKLRQRQYHSRLDFVEDVKLIVHNSTLYNGAKSPLTQIAQDMLGVCE
KRVAEKEDKITRLEKAINPLLDDDDQVAFSFILENIITQKMMNVPNSWPFHQPVNKKFVP
DYFKVISQPMDLETLKKNVQSHKYRNRDAFMKDVDLIHRNSVKYNGADSPFTCTAEEVVR
SCKETLDEYDEHLTQLENDIRHAQEAAIAAAMQDEDQDGSNLPSNPNSPQPGDVDMEEDS
LLDNTTTAHDESWESAPPTEPQPGPSRESVGDADFIDVVGDEEAMEMDRSKRGRGEEDTG
KQEDTLMEDLLVSESESDAESDLPYTRQDSDLSDYYDQGDNGSSRPVSAAFESYQNEDSN
FDYSYDVEDEDSRLPDEDSNLPTDLNLSEDDEEEDSRYADDNAQFPDMSNQYFQQQPAAQ
RSLQFSDQFFEEVNQAAVGDSLQPTEGLDTRDLVAQAMAEIDNKESDGEDFVSVGGDLSE
ESSDPDV
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggattctggtgacgaagacgaccgtgagccgcccctgtctctgaccgggtttctgttt
ggaaacatcgatcagaaggggcaacttgaagatgacgatattttggaccaggaatccaag
cgacacttgaatcagttgaactcccttggaggatttggtagcctggttcaggagatcaca
gcagataccgataacaatggagatgatgagcaggacagtcagacaagctcaagtgcaggg
aaaccgtcatccttgccgcagatttggagaggcgccaagcgcagaagaaaacggcgcagg
ccaacgggagaagaacctctggaggattcctacgagtgggagtttgactacgcacccatt
cctcctcctgaccagtggatgtctgatgatgaggagaagatgatgcgccccatggaagct
ttacctgacacaggtgtgaggaaagaggcttcaaatgatgacaacagaccagagatccct
gagtggagatacggccctgccaggtactggtacgacatgctgggggtgcccgagactgga
gagggcttcgactatggcttcaaactggcgcagaattctgacagtgacagtggcaatgaa
ggtgatgatgaaagagaagagtccaaagaaccccccaagccctccgaacctgaaccccag
aaagaagaacccacagagaagacagaagatcagccagaagacatggagacctctgaagaa
gcagaggtggtcccaaagtctgagtttccagaggaggagtatttctacatggtggcacag
aggtcctgggaggatgatatagtgtgggacggggaacagatcaaggataaagtactgcag
tctaaatctgcagctatggcaggatggatcccaactagtaccagtaggactgctcagtcc
ttcagctcgcaacaaggtttgaacatcaatgtgactctcccaaacagtataccctccaca
tcgtctggaaagaaccagcaagacccagatgatgagcagctgtggtactcactgttccct
gtggaaaaccctgagctggtgtatgggaactgggaagatgacatcatctgggacccacag
aatatgaaggagattccgaagcccaaggtcatgaaacttgaccccaatgacgaaaacatc
atcttcggaattccggacgaccccgacccgcttccggacgacacgccctccaaggacaag
aaggaagtccgccagtcgaccttactgctgaaaaagagaggcttgaccaagccagagtcc
gaccagttgtcggaaccagggaagaaaaagaaaaatgtgtccaacgtgtcccacaatgag
cagaaagacccctggaacctgtccaatgatgaatactacgaccccaaacacagtctgcaa
gagacaacactaagggctagcatgggtggcaacctagtgcagcactcaaccccagccatt
gagctgcgccagccgttcttcccgacccacatgggacccatcaagctgagacagctccac
cgaccccccctcaggaagttctcccacggacccctggcccagcctgggcctcacagtgtc
ctacctctcctcaaacagatcaagaagaaagctaagctgagagaacaggagagacaggcc
tctggaggtggggaggtgttcttcatgaggactccccaggacctgacggggatggacggg
gagatcctgctggcagagtacagcgaagagtacgctcctctcgtcagccaggtcggcatg
gcaaccaagatcaagaacttctacaagaggaaagctggccacaccaccggaccccctaag
tttgagtacggagagacggtgtacgcgcacacctcccccttcctgggccccctgcacccc
gggcaggccctacaggccttcgagaacaacctgttccgtgcacccatctaccaacacaag
atccccgaaactgacttcctcgtcattcgcaccagagtgcattactacatccgtgagttc
caaggtctgttctgtgttggacaagaatgtcccctgtatgaggtgcctgggccaaactcc
aagagagccaacaaccatgttagggacttcctccaggttttcatctacagactgttctgg
aagagcaaagacaagccacgcagaatcaagatggaggacatccgtaaggccttcccaaca
cactcggagagcagcatccgcaagaggctgaagctgtgcgctgacttcaaaagaactggc
atggactctaactggtgggtgctgaagccagagttccgcctgccctctgaggaagagatc
cgagccatggtgtctcctgaacagtgctgtgcttactacagcatgctggaggcggaacag
aggctcaaggatgctgggtatggtgagaagtctctgtttgctccagaagaggagaatgag
gaggagttccagagaaacatagatgatgaggtgcgcacggctccatggaacaccacccga
gccttcatctccgccatgaaggggaagtgtctgctggccgtgatgggcgtggctgacccg
acaggctgtggggagggcttctcttacatcaaggttccaaacaagccccagtcctccaag
gatgacaactcgccccagcccgtgaagagaacggtaacgggaacagacgcggatctgcgt
agactgtccctgaagaatgccaagcagctgctgaggaagtttggtgtgtctgaggaagag
atcaagaaactgtcaagatgggaggtgattgatgtggtgagaaccatgtccacagagcag
gccaggtcaggcgaggcggggatgagtaagtttgctcgcgggactcggttctccgtggca
gagcaccaggagaagtacaaggaggagtgtcagcggatattcgaccttcagaacaaggtc
ctttcctctgctgaagtcctgtccacagatgaggagagcagttctgcagatgacagtgac
tttgaagagatgggcaagaacattgagaacatgctggctaacaagaaaaccagccaacag
atcacccgtgagagggaagaggcagagaggaaggagctgcagagaatgatcatgggggaa
gacacaagcaaggaccgagacaaagatgacaagagagaaagtaagcgctcgtcgtctacg
ggcacccccattcctggagcacgtggtcaggatgatgacttagagagcataggctcatcc
ttcactggtcgaagactgaagatctacaggacctttaaggatgaggatgggaaagaatat
gtcagaacagagactgtccgcaaaccctctgtcatcgacacctatgtccgcatcaggacc
accaaagacgagaacttcattaagaactggctggcccaggatgaacaacacaaggaggag
atgagaagagaaagaagaagaattcaagagcagctcagacgcatcaaaaggaaccaggag
aaggagaagatggctcctcctcccaagaagaaaaagaagaagcctgaccaacccccactc
aagttgaagtgcggtgcctgtggacagatcggccacatgagaaccaataaggagtgtccc
ctgtacgagaggagccacgcccctccctcccatccggttgccatgacagaggagcaggag
gaggaggtggagaggtacaccatcaaggaggatgagaacctcatcaaggtggagggcacc
aaactcatcctggggaaatcactcgtggaccaggctgctgcagtccgtcgagagtccctg
attctcaagttccccaaagccatgcagcccaagaaggatgagaagaagaaaagaagggtg
gggacagtcacacactgtgactacctaaagagacccaagaagtcggcaaaccggcgccgt
acggatcccgtggtgacactgtcgtccatcctggagaacttcctgaacgagatgcgagac
ttgccgaacacctaccccttccaccagcccgtcaaccctcgcatggtcgtggactattac
aagatcgttcaccgaccaatggatctccaaactatgagagagaaactgcggcagcggcag
taccactcccgtctggactttgtggaagatgtgaaactcattgttcacaacagtaccctg
tataatggtgcgaagagcccactgacccagatagcacaggacatgctgggcgtgtgtgag
aagagagtagctgagaaggaggacaagatcacccgtctggagaaggccatcaacccgctc
ctagatgatgatgaccaggtcgccttctccttcatcctggagaacatcatcactcagaag
atgatgaacgttcccaattcttggcccttccaccagccagtcaacaagaagtttgtccct
gactacttcaaggtcatctcacagcccatggatttggagacactcaagaagaatgtgcag
tcgcacaagtaccgtaaccgtgatgccttcatgaaggacgtagacctgatccacaggaac
agtgtgaagtacaacggtgcagacagccccttcacatgtacggctgaggaggtcgtcagg
tcatgtaaggaaactctggatgagtatgacgagcacctgacccagctggagaacgatatc
cgccatgctcaggaggccgccatcgctgccgccatgcaggacgaggaccaagatggcagc
aacctgccctccaaccccaacagtcctcagcctggtgatgtagacatggaggaggacagt
ctgctggataacaccaccacagcccatgatgagagctgggagagtgccccgcccacggag
ccccagcccggcccctccagggagtctgtgggagacgctgacttcatcgatgtggtggga
gacgaggaggccatggagatggaccggtccaaacgtggcaggggggaggaggatacaggt
aagcaggaggacaccctgatggaagacctgctggtgtcagagagtgagagtgatgctgag
agcgaccttccctacaccagacaggacagtgatctctcagactactacgaccaaggagac
aatggtagcagccgccctgtgtccgctgcctttgagagttaccagaacgaagactccaac
tttgactacagctatgatgtggaagatgaagacagccgtctccccgacgaggactccaac
ctccccaccgacctgaacctgtcggaggacgatgaggaggaggactctcgctatgctgac
gacaacgcccagttccccgacatgagtaaccagtacttccagcagcagcccgccgcgcag
cgctcgctccagttcagcgaccagttcttcgaggaggtgaaccaagcggccgtaggggat
tccctacagcccacagaggggttggacaccagggacctggtcgcacaggccatggctgaa
atcgacaacaaggagagcgatggagaagactttgtgtcagttggaggagaccttagtgag
gagagctcagacccagatgtgtaa
DBGET
integrated database retrieval system
