Branchiostoma floridae (Florida lancelet): 118428562
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Entry
118428562 CDS
T01074
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118428562
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
118428562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
DEAD
HDA2-3
TPR_2
UIM
SWI2_SNF2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
118428562
NCBI-ProteinID:
XP_035694551
UniProt:
A0A9J7N7X8
LinkDB
All DBs
Position
13:16512450..16548646
Genome browser
AA seq
1511 aa
AA seq
DB search
MSINSTAEAVGRMRLEDGDFAKPRPSGMGMMDASSKALFNKLIMRAKQEQEKGNLQKALQ
KFREAQKVYPTDKLLKKIKKIEAYLLLSEEEEEEEQQDDGMVMVTEGLKLPKGVYNNLYP
YQQDCVKWFHSLAVKRKGGILGDDMGLGKTVQVTAFLYGMFLQEKIHSVLIILPVALITN
WERELEKWSSGEIRVKQFHGTSVRERGRNLERVQRKGGVVLTSYGMVSNNWEQLAKIDYK
EFVWDYVILDEGHKIKNPTKTTKACHAIPARNRFILTGTPIQNNLREMWSLFDFVSQGTL
LGTAKTFKMEYENPITRAREKDATAGEIHLGNRMSESLRQLIAPYFLRRTKAEVMPKDKE
NADPNESTGTDQEQASGNSFPSLERKNDLILWVILSRAQQQIYKDFLSLDRVKEMLMTTR
SPLAELNVLKKICDHPRLLSTLACAQLGLDGEDGMDPEDVDNMAHEVAANSIENISTDQL
MAESGKTCVLVELLERLKEEGHQTLVFSQSRKMLDIIQKILKSRGFKVMRIDGTITKLED
RDKRIRRFQSDPSWSVFLLTTQVGGVGLNLTAADRVVIYDPSWNPATDAQAVDRAYRIGQ
KKSVVIYRFITCGSVEEKIYRRQVFKESVTRQTTGACKDPFRYFSRQDLRELFVMDNPEH
STTQEQLAQMHSQNRKSDTNLDEHIAYLHSLGIFGISDHDLLYTKQADHEELPEGQEYIQ
QRVHKARELVLAESQLHRQMNEMRQTTTEASFLRRHGGKQPGQELTGAAGTQDGFPDNLP
AMFQPSQDHNPRNMLNKPKARTVSSDDYTDSPVRPADLPGQFIDLRQETEEEQAQQLEKS
FAKISISSQEKEDEEEQEYGNSSEEADQEDAENEQLQMALALSLQDNPQQSLKTSTREPL
TNGLNISRQKDEGDISKQGDMFMEDSIVSVDDDRATPGLNQALFTSSDSLQFVADSGDED
TSRGQPSSRSSSRPVSRGDVFVIEDSEPEDSGSDDDVPVVSTALPSREAVINVNDAEEEG
ITHEESPHNTEEKKRELNASVAMDTQHPDDASGEEGTEDEDDSQHLQDESHALQEDDSRS
KSAATAVVSDDSEEESEPAGTIDQDPKQTDRKSFSSELEGHNRSSLGHSRSSLGHNGSSL
GHNGASLDDSLIKSARRRPRPRVIDSDSEDDSHDLSRDENSPEVHSHSQSNSSGDDQESM
EESNNSSRSPEKRRNKQKATILSGSEEDLNSEENSPKDYCSQSDIFEDDQETVEESNNLS
TASSPGERRNKQKATILSGSEEDLHSDENNQSDDSGDGEESVEEANNSSTASSPGKKRNN
QKATILSGSEEDLHSDDNSQSDDESLEEDNNLSTARSPGKKRTNQRPAVLSGSEEEEEAE
DDSFIVADEEDSNTGDAETDDDDESITLDHKDKDEKQGQEEEEEEEDAESSGMEDEEEYY
SPEENSLLEDAAPQPDRTYKELVEQGRKLEADGSLQDALNHYLQALDMEGDDPTLQMAAL
KLAQKLHTGKK
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaacagcacagcagaggctgtgggtaggatgagactggaagatggcgatttt
gccaagcccagaccatcaggtatgggcatgatggatgcttcatcgaaggctctcttcaac
aagctgatcatgagagccaagcaagagcaggagaaaggaaaccttcagaaggccctacag
aagttcagggaggcacagaaggtttatcccacagacaaattgctgaagaagatcaagaaa
atagaggcatacctcctgctgagtgaggaagaggaagaggaggaacagcaggatgacgga
atggtgatggtgacagaaggtctaaaactgcccaagggcgtttacaacaacctctacccc
taccaacaggactgtgtcaagtggtttcacagcctggctgtcaaacggaagggagggata
ctcggagatgatatggggttgggtaagacggtgcaagtcacagccttcctttatggaatg
tttctccaagagaagatccacagtgtacttatcatcttgcctgtggcgctaatcactaac
tgggagagagaactggaaaaatggtcttcaggagaaatccgagtgaaacagttccacgga
accagcgtgagagagcgaggcaggaacctggagcgtgtgcagaggaagggaggtgtggtc
ctcaccagctacggcatggtctccaacaactgggaacagctcgccaagatcgactacaag
gagttcgtctgggactacgtcattcttgacgagggccacaagataaagaaccccaccaag
acgacgaaagcctgccacgccatcccggccaggaacaggttcatcttgactgggactccc
atacagaacaacctccgggagatgtggtctctgtttgacttcgtgtctcaaggcacgctc
ctcgggacggccaagaccttcaagatggagtatgagaaccccatcacaagggccagagag
aaggacgccacggcaggtgagatccacctggggaaccggatgtcggagagccttaggcag
ctcatcgccccgtacttcctgaggaggaccaaggccgaggtcatgcccaaggacaaggag
aacgctgaccctaacgagagcactggaacggaccaggaacaagcttcagggaactccttc
ccttctctggagcggaagaatgacctgatcctgtgggtgatcctgtcccgcgcccagcag
cagatctacaaggacttcctcagtctggacagggttaaagagatgctgatgacgaccagg
tcaccgctggcagagctgaatgtgctgaagaagatctgtgaccacccccgcctcctgtcc
accctggcgtgtgcacaactcggcctggatggagaagatggaatggacccagaagatgta
gacaacatggctcacgaggtggcagccaacagcatcgagaacatctccacagatcagctc
atggcggagtcaggcaagacgtgtgtcttagtggagctgttggaacgtcttaaggaggaa
ggtcaccagacgctcgtcttctcacagtcaaggaagatgctggacattatccagaagatc
ttgaagagcaggggcttcaaagtgatgaggattgacggcaccatcaccaagctggaggat
cgagacaagcggatccgcaggttccagagcgacccttcctggagtgttttcctgctcacc
acacaggttggtggcgttgggttgaacttgacggcagcagacagggtggtcatatatgac
cccagttggaacccggccacggatgcgcaggcagtagacagggcataccgtattgggcag
aagaagtcagttgtcatctaccgcttcatcacctgtggatcagtggaggagaagatctac
agaagacaggtgttcaaggagtcggtcaccaggcagaccactggagcctgcaaggacccc
ttcaggtacttctccagacaggaccttcgagagctgtttgtgatggacaacccagaacat
tccaccacacaggagcagctggcacagatgcactcacagaacaggaagtctgacacgaac
ttggatgagcacatcgcctacctccactctctgggaatattcggcatcagcgatcacgac
ttgctgtacaccaaacaggctgaccatgaggaactaccagaaggccaggagtacattcaa
cagagggttcacaaggcccgtgagctggtattggcggagtctcagctccaccgccagatg
aacgagatgcgccaaacgacgacagaggccagcttcctgcgccgccacggagggaagcag
ccgggacaggagctgactggcgccgcgggaactcaggacggtttccccgacaacctaccc
gcgatgttccagcccagccaggaccacaacccgcgcaatatgctcaacaaacccaaggcc
aggaccgtgagcagcgatgactacactgacagccctgtgcgcccagctgacctgccagga
cagttcatcgacctcaggcaggaaactgaagaggagcaggcacagcagctggagaagagt
tttgccaagatcagcatcagcagccaggagaaggaggatgaggaagagcaggagtacgga
aacagctctgaagaagctgaccaagaggatgctgaaaacgagcagctacagatggccctg
gcactgtccctgcaggacaaccctcagcagagcctcaagacttccacaagagaacctctc
accaatggactcaacatcagcaggcagaaagatgagggagacatttccaaacagggcgac
atgttcatggaggattccatcgtctccgttgacgacgaccgagccacgcctggactgaac
caggccctgttcaccagcagtgacagtctacagtttgtggcagacagcggagacgaggac
acatcacgaggacagcccagctccaggtcctcctccagaccagtgtccaggggagatgtt
tttgtcatcgaggactcggaaccggaggattcaggtagtgatgatgatgtgcccgtagtt
tccacagcacttccttctagagaggctgtcatcaatgtgaacgatgcagaagaagagggt
atcacacacgaggagtctcctcacaacacagaagaaaagaaacgagagttgaatgcatca
gttgccatggatacgcagcatccggatgatgcaagtggtgaggagggaacagaagatgaa
gatgacagccaacaccttcaagatgaaagccatgcccttcaagaagatgacagcagatca
aaaagcgctgctactgctgttgtttctgatgacagtgaagaagagagtgaaccagctggc
accatcgaccaggacccaaagcagacagacaggaaaagcttttcctctgagcttgaaggg
cacaacaggtcatcactggggcacagcaggtcgtcactggggcacaacggatcctcactc
gggcacaacggagcgtcgctggacgacagtctcatcaaaagtgccagaaggcggccccgg
cctcgtgtgatcgactccgattctgaagacgacagccatgacttgagcagagacgaaaac
agccccgaagttcatagccacagccaatccaacagttcaggagatgaccaagagtccatg
gaggagagcaacaactcgtccagaagtccagagaaaagacggaacaaacagaaagcgaca
atcctatctggcagtgaggaagacttgaacagtgaagagaacagccccaaagattattgt
agccagtctgatatttttgaagatgaccaagagacagtggaggagagcaacaacttgtcc
acagccagcagccctggggaaaggagaaacaaacagaaagctacaatcctatccggcagt
gaggaggacttgcacagcgacgagaacaaccagtcagatgactcaggagatggtgaagag
tcagtggaggaggccaacaactcgtccacagccagcagtcctgggaaaaagagaaacaat
cagaaagctacaatcctatccggcagtgaggaggacttgcacagtgatgataacagccag
tctgatgatgaatcattggaggaggacaacaacttgtccacagccagaagtcctggaaag
aagagaaccaatcagagacctgcagtcctgtcaggcagtgaagaggaagaagaagctgaa
gatgatagctttattgtggctgatgaggaggactctaacactggagatgctgagactgat
gatgatgatgagtctatcacactggaccataaagacaaagatgagaagcaagggcaggag
gaggaggaggaggaagaagatgcagagagctctggaatggaagacgaggaggagtattac
tctcctgaggaaaacagcttgcttgaagatgcagccccacagccagacaggacctacaag
gagcttgtggagcagggaaggaagctcgaggcagacggtagcctgcaggatgccctgaac
cactacctgcaggccctggacatggaaggagacgacccaactctgcagatggctgcttta
aaactggcccagaaattacacaccgggaaaaagtga
DBGET
integrated database retrieval system
