Bacteroides fragilis YCH46: BF3108
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Entry
BF3108 CDS
T00202
Name
(GenBank) outer membrane protein oprM precursor
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr01501
beta-Lactam resistance
bfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BF3108
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BF3108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfr02000
]
BF3108
01504 Antimicrobial resistance genes [BR:
bfr01504
]
BF3108
Transporters [BR:
bfr02000
]
Other transporters
Pores ion channels [TC:
1
]
BF3108
Antimicrobial resistance genes [BR:
bfr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BF3108
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BF3108
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BF3108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6175
Motif
Other DBs
NCBI-ProteinID:
BAD49853
UniProt:
Q64RM8
LinkDB
All DBs
Position
complement(3516403..3517779)
Genome browser
AA seq
458 aa
AA seq
DB search
MKRSYLYITLLLVVLTLGSCKIGKSYVRPELNLPDSLAQHQDSLSFGDKEWWQIYTDSTL
RSLIDRALEHNKDMLIAAARVKEMAAQKRISTANLLPDIRGTVTAERENENHGGDAFKRS
DTFEAQLLFSWELDLWGNLRWARSASIAEYLQSVEAQRALRMTIIAEVAQAYYELVALDT
ELDIVRQTLKAREEGMRLARIRFEGGLTSETSYRQSQVELARTATLVPDLERKISLKEND
IAFLAGEYPNKITRSRLLQEFNFPQELPVGLPSGLLERRPDIRQAEQKLIAANARVGVAY
TNMFPRISLTGRVGSESTALSELLKSPYSIMEGALLTPIFGWGKNRAALKAKKAAYEAEV
HSYEKAVLTAFKETRNSIVNFNKIKEVYDLRAKLERSAKSYVDLAQLQYINGVTNYLDVL
DAQRGYFDAQIGLSNAIRDELIAVVQVYKALGGGWQVQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagctatttatatattactcttttattagttgtattaactttaggttcctgt
aaaataggaaaaagttatgtccgtccggaactgaatctgcccgatagtctggcgcaacat
caggacagcttgagtttcggagataaggaatggtggcagatttacactgacagtaccctt
aggagtttgatagacagggccttggaacacaataaagacatgctgatagctgctgcccgt
gtcaaggagatggctgcgcaaaaacgtatttcaacagcaaatctgttgcctgacattaga
ggtaccgtgactgcggagagagaaaatgaaaaccacggtggtgatgctttcaagcgtagc
gatacttttgaagcgcagcttcttttctcttgggaactcgatctgtggggaaatcttcgt
tgggcgcgttccgccagcattgccgagtaccttcagtctgtggaggcacaacgtgccctt
cgcatgactatcatagccgaagtagcgcaggcatactatgaacttgtagctctcgatacg
gaattggatattgttcgccaaacattgaaagcacgtgaggaaggcatgcgtcttgcccgc
atccgtttcgaaggaggtttgacatctgaaacttcttatcgtcagtctcaggttgagttg
gcacgtactgcaacactggtgcccgatctggaacgtaaaatatctctgaaagaaaacgat
atagcttttctagccggtgaatatcccaacaaaattacccgtagccgtttgttgcaggag
tttaactttccacaagagttacctgtcgggttgccttccggattattggaacgtcgcccc
gatattcgtcaggctgaacagaaattgattgctgccaatgcccgggtaggagtggcttat
acgaatatgtttccacgtatttcacttaccggtagggtagggtcggaaagtaccgctctc
tccgaactgttgaaatcgccttatagcattatggaaggtgctttacttacgcctattttt
ggttggggaaaaaatcgtgccgctctcaaagcaaagaaagccgcttatgaagctgaagtg
cacagctatgaaaaggctgtcctgactgctttcaaagagacgcgcaattcgattgtcaac
ttcaataagattaaggaggtatacgaccttcgtgcgaaattggaacgttcggctaagagt
tatgtagacttggcacaattacaatatatcaatggggtgacgaactaccttgatgtgctc
gatgcccagcgtggatatttcgatgcccaaatcggactcagcaatgcgataagggacgaa
ttgatcgctgtagtacaagtgtataaggctctggggggcggatggcaggtgcaatga
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